RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 FOXE3Q13461 319 aa8.87□□□□□ -0.99
RFFL-205ENST00000415395 COTL1Q14019 142 aa8.87□□□□□ -0.99
RFFL-205ENST00000415395 MRPL51Q4U2R6 128 aaKnown RBP8.87□□□□□ -0.99
RFFL-205ENST00000415395 PRR31Q5SQ13 230 aa8.87□□□□□ -0.99
RFFL-205ENST00000415395 Q6ZVH6 145 aa8.87□□□□□ -0.99
RFFL-205ENST00000415395 IFI27L1Q96BM0 104 aa8.87□□□□□ -0.99
RFFL-205ENST00000415395 C8orf49Q96NF6 230 aa8.87□□□□□ -0.99
RFFL-205ENST00000415395 PRR25Q96S07 402 aa8.87□□□□□ -0.99
RFFL-205ENST00000415395 ZFAND3Q9H8U3 227 aa8.87□□□□□ -0.99
RFFL-205ENST00000415395 ZFHX3Q15911 3703 aa8.86□□□□□ -0.99
RFFL-205ENST00000415395 MYO9AB2RTY4 2548 aa8.86□□□□□ -0.99
RFFL-205ENST00000415395 TLN2Q9Y4G6 2542 aa8.86□□□□□ -0.99
RFFL-205ENST00000415395 RBAKDNA6NC62 111 aa8.86□□□□□ -0.99
RFFL-205ENST00000415395 M0R3E3 92 aa8.86□□□□□ -0.99
RFFL-205ENST00000415395 TWIST1Q15672 202 aa8.86□□□□□ -0.99
RFFL-205ENST00000415395 AMMECR1LQ6DCA0 310 aa8.86□□□□□ -0.99
RFFL-205ENST00000415395 C2orf91Q6ZV80 131 aa8.86□□□□□ -0.99
RFFL-205ENST00000415395 AMN1Q8IY45 258 aa8.86□□□□□ -0.99
RFFL-205ENST00000415395 BOD1L2Q8IYS8 172 aa8.86□□□□□ -0.99
RFFL-205ENST00000415395 RNF152Q8N8N0 203 aa8.86□□□□□ -0.99
RFFL-205ENST00000415395 NXT2Q9NPJ8 142 aaKnown RBP8.86□□□□□ -0.99
RFFL-205ENST00000415395 LOC389332A0A1B0GUA5 103 aa8.85□□□□□ -0.99
RFFL-205ENST00000415395 DNAJC9-AS1A6NH13 148 aa8.85□□□□□ -0.99
RFFL-205ENST00000415395 FABP5P3A8MUU1 101 aa8.85□□□□□ -0.99
RFFL-205ENST00000415395 ARL3P36405 182 aa8.85□□□□□ -0.99
RFFL-205ENST00000415395 CACNG7P62955 275 aa8.85□□□□□ -0.99
RFFL-205ENST00000415395 TMEM95Q3KNT9 176 aa8.85□□□□□ -0.99
RFFL-205ENST00000415395 KLK15Q9H2R5 256 aa8.85□□□□□ -0.99
RFFL-205ENST00000415395 CST9LQ9H4G1 147 aa8.85□□□□□ -0.99
RFFL-205ENST00000415395 SMPXQ9UHP9 88 aa8.85□□□□□ -0.99
RFFL-205ENST00000415395 TMSB15BA0A087X1C1 80 aa8.85□□□□□ -0.99
RFFL-205ENST00000415395 TMEM213A2RRL7 107 aa8.85□□□□□ -0.99
RFFL-205ENST00000415395 GAGE10A6NGK3 116 aa8.85□□□□□ -0.99
RFFL-205ENST00000415395 NDUFA4O00483 81 aa8.85□□□□□ -0.99
RFFL-205ENST00000415395 IGLC6P0CF74 106 aa8.85□□□□□ -0.99
RFFL-205ENST00000415395 MYOZ3Q8TDC0 251 aa8.85□□□□□ -0.99
RFFL-205ENST00000415395 ASCL2Q99929 193 aa8.85□□□□□ -0.99
RFFL-205ENST00000415395 SLC50A1Q9BRV3 221 aa8.85□□□□□ -0.99
RFFL-205ENST00000415395 IGKV2-40A0A087WW87 121 aaPredicted RBP8.84□□□□□ -0.99
RFFL-205ENST00000415395 LINC01546A6NGU7 62 aa8.84□□□□□ -0.99
RFFL-205ENST00000415395 C9orf118A6NHY6 69 aa8.84□□□□□ -0.99
RFFL-205ENST00000415395 IGKV2D-40P01614 121 aaPredicted RBP8.84□□□□□ -0.99
RFFL-205ENST00000415395 SRD5A1P18405 259 aa8.84□□□□□ -0.99
RFFL-205ENST00000415395 OCIAD2Q56VL3 154 aa8.84□□□□□ -0.99
RFFL-205ENST00000415395 ZNF418Q8TF45 676 aaPredicted RBP8.84□□□□□ -0.99
RFFL-205ENST00000415395 METTL26Q96S19 204 aa8.84□□□□□ -0.99
RFFL-205ENST00000415395 VPS25Q9BRG1 176 aa8.84□□□□□ -0.99
RFFL-205ENST00000415395 CNFNQ9BYD5 112 aa8.84□□□□□ -0.99
RFFL-205ENST00000415395 A0A096LNJ9 63 aa8.83□□□□□ -1
RFFL-205ENST00000415395 NCR2O95944 276 aa8.83□□□□□ -1
RFFL-205ENST00000415395 RNASE1P07998 156 aaKnown RBP8.83□□□□□ -1
RFFL-205ENST00000415395 FGF6P10767 208 aa8.83□□□□□ -1
RFFL-205ENST00000415395 RNF151Q2KHN1 245 aa8.83□□□□□ -1
RFFL-205ENST00000415395 MCRIP2Q9BUT9 160 aaKnown RBP8.83□□□□□ -1
RFFL-205ENST00000415395 ACANP16112 2415 aa8.83□□□□□ -1
RFFL-205ENST00000415395 CLPSL1A2RUU4 121 aa8.83□□□□□ -1
RFFL-205ENST00000415395 ATP5LO75964 103 aa8.83□□□□□ -1
RFFL-205ENST00000415395 LY6G6DO95868 133 aa8.83□□□□□ -1
RFFL-205ENST00000415395 ORM1P02763 201 aa8.83□□□□□ -1
RFFL-205ENST00000415395 FCER1GP30273 86 aa8.83□□□□□ -1
RFFL-205ENST00000415395 C21orf62-AS1Q17RA5 79 aa8.83□□□□□ -1
RFFL-205ENST00000415395 ANKRD39Q53RE8 183 aa8.83□□□□□ -1
RFFL-205ENST00000415395 OR5A1Q8NGJ0 315 aa8.83□□□□□ -1
RFFL-205ENST00000415395 DUX5Q96PT3 197 aa8.83□□□□□ -1
RFFL-205ENST00000415395 JMJD8Q96S16 334 aa8.83□□□□□ -1
RFFL-205ENST00000415395 U3KQE9 123 aa8.83□□□□□ -1
RFFL-205ENST00000415395 GAGE12BA1L429 117 aa8.82□□□□□ -1
RFFL-205ENST00000415395 BUB3O43684 328 aa8.82□□□□□ -1
RFFL-205ENST00000415395 NPYP01303 97 aa8.82□□□□□ -1
RFFL-205ENST00000415395 MRPL53Q96EL3 112 aaKnown RBP8.82□□□□□ -1
RFFL-205ENST00000415395 UBE2E2Q96LR5 201 aa8.82□□□□□ -1
RFFL-205ENST00000415395 ESM1Q9NQ30 184 aa8.82□□□□□ -1
RFFL-205ENST00000415395 SONP18583 2426 aaKnown RBP8.81□□□□□ -1
RFFL-205ENST00000415395 IGHV3-35A0A0C4DH35 117 aa8.81□□□□□ -1
RFFL-205ENST00000415395 IGHV3-11P01762 117 aa8.81□□□□□ -1
RFFL-205ENST00000415395 HLA-DRB4P13762 266 aa8.81□□□□□ -1
RFFL-205ENST00000415395 HILS1P60008 231 aa8.81□□□□□ -1
RFFL-205ENST00000415395 Q6ZSV7 163 aa8.81□□□□□ -1
RFFL-205ENST00000415395 HIGD1BQ9P298 99 aa8.81□□□□□ -1
RFFL-205ENST00000415395 TP73-AS1Q9UF72 201 aa8.81□□□□□ -1
RFFL-205ENST00000415395 HLA-DRB4X5D2U9 266 aa8.81□□□□□ -1
RFFL-205ENST00000415395 K7EP34 96 aa8.8□□□□□ -1
RFFL-205ENST00000415395 TRBV12-3P01733 135 aa8.8□□□□□ -1
RFFL-205ENST00000415395 LGALS1P09382 135 aaKnown RBP8.8□□□□□ -1
RFFL-205ENST00000415395 Q71RC1 249 aaPredicted RBP8.8□□□□□ -1
RFFL-205ENST00000415395 GPHB5Q86YW7 130 aa8.8□□□□□ -1
RFFL-205ENST00000415395 WFDC12Q8WWY7 111 aa8.8□□□□□ -1
RFFL-205ENST00000415395 OTOGQ6ZRI0 2925 aa8.8□□□□□ -1
RFFL-205ENST00000415395 TRAV8-6A0A0B4J262 113 aa8.8□□□□□ -1
RFFL-205ENST00000415395 K7EMT4 169 aa8.8□□□□□ -1
RFFL-205ENST00000415395 NMUP48645 174 aa8.8□□□□□ -1
RFFL-205ENST00000415395 KIR3DS1Q14943 382 aa8.8□□□□□ -1
RFFL-205ENST00000415395 FAM106AQ4KMX7 169 aa8.8□□□□□ -1
RFFL-205ENST00000415395 LCNL1Q6ZST4 164 aa8.8□□□□□ -1
RFFL-205ENST00000415395 Q8N8P6 123 aa8.8□□□□□ -1
RFFL-205ENST00000415395 SMR3AQ99954 134 aa8.8□□□□□ -1
RFFL-205ENST00000415395 C16orf95Q9H693 158 aa8.8□□□□□ -1
RFFL-205ENST00000415395 HIVEP2P31629 2446 aa8.79□□□□□ -1
RFFL-205ENST00000415395 TNFRSF6BO95407 300 aa8.79□□□□□ -1
RFFL-205ENST00000415395 LEPP41159 167 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms