RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 NDUFA4O00483 81 aa6.73□□□□□ -1.33
SYNE1-211ENST00000413186 ADCYAP1P18509 176 aa6.73□□□□□ -1.33
SYNE1-211ENST00000413186 SYT8Q8NBV8 401 aa6.73□□□□□ -1.33
SYNE1-211ENST00000413186 POLR3KQ9Y2Y1 108 aaPredicted RBP6.73□□□□□ -1.33
SYNE1-211ENST00000413186 J3KT08 172 aa6.73□□□□□ -1.33
SYNE1-211ENST00000413186 MLANAQ16655 118 aa6.73□□□□□ -1.33
SYNE1-211ENST00000413186 SAMD5Q5TGI4 173 aa6.73□□□□□ -1.33
SYNE1-211ENST00000413186 SPXQ9BT56 116 aa6.73□□□□□ -1.33
SYNE1-211ENST00000413186 GNB1LQ9BYB4 327 aa6.73□□□□□ -1.33
SYNE1-211ENST00000413186 UBL5Q9BZL1 73 aa6.73□□□□□ -1.33
SYNE1-211ENST00000413186 A6NDX4 124 aa6.73□□□□□ -1.33
SYNE1-211ENST00000413186 SRIP30626 198 aa6.73□□□□□ -1.33
SYNE1-211ENST00000413186 VWC2Q2TAL6 325 aa6.73□□□□□ -1.33
SYNE1-211ENST00000413186 FAM90A2PQ658T7 463 aa6.73□□□□□ -1.33
SYNE1-211ENST00000413186 LINC01551Q86U37 167 aa6.73□□□□□ -1.33
SYNE1-211ENST00000413186 CYYR1Q96J86 154 aa6.73□□□□□ -1.33
SYNE1-211ENST00000413186 C1orf194Q5T5A4 169 aa6.73□□□□□ -1.33
SYNE1-211ENST00000413186 RHPN1-AS1Q9BWJ2 59 aa6.73□□□□□ -1.33
SYNE1-211ENST00000413186 GAGE12BA1L429 117 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 TEX22C9J3V5 150 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 TMEM238C9JI98 176 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 IGLV2-14P01704 120 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 IGHG2P01859 326 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 TAL2Q16559 108 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 ZNRF2Q8NHG8 242 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 OCC1Q8TAD7 63 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 TNRC18O15417 2968 aaPredicted RBP6.72□□□□□ -1.33
SYNE1-211ENST00000413186 PYYP10082 97 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 RPL15P61313 204 aaKnown RBP6.72□□□□□ -1.33
SYNE1-211ENST00000413186 FAM159AQ6UWV7 190 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 Q6ZPA2 131 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 SHANK2-AS3Q9BTD1 123 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 SCRT1Q9BWW7 348 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 TSSC4Q9Y5U2 329 aaPredicted RBP6.72□□□□□ -1.33
SYNE1-211ENST00000413186 H7C1H1 209 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 BLCAPP62952 87 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 USP9XQ93008 2570 aaPredicted RBP6.72□□□□□ -1.33
SYNE1-211ENST00000413186 A0A1B0GUT8 65 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 D6R8Y8 96 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 PAX4O43316 350 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 IFI27P40305 119 aaPredicted RBP6.72□□□□□ -1.33
SYNE1-211ENST00000413186 KRTAP10-9P60411 292 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 C1orf195Q5TG92 126 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 MUSTN1Q8IVN3 82 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 THAP8Q8NA92 274 aa6.72□□□□□ -1.33
SYNE1-211ENST00000413186 MCRIP2Q9BUT9 160 aaKnown RBP6.72□□□□□ -1.33
SYNE1-211ENST00000413186 SONP18583 2426 aaKnown RBP6.72□□□□□ -1.33
SYNE1-211ENST00000413186 GRIFINA4D1Z8 144 aa6.71□□□□□ -1.33
SYNE1-211ENST00000413186 IGLV2-23P01705 113 aa6.71□□□□□ -1.33
SYNE1-211ENST00000413186 PDE6HQ13956 83 aa6.71□□□□□ -1.33
SYNE1-211ENST00000413186 CSMD2Q7Z408 3487 aa6.71□□□□□ -1.33
SYNE1-211ENST00000413186 PMS2P5A8MQ11 134 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 A8MWP6 167 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 EBI3Q14213 229 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 STHQ8IWL8 128 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 AJUBAQ96IF1 538 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 PGLYRP4Q96LB8 373 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 PSMG3-AS1Q96PY0 264 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 SPANXCQ9NY87 97 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 FAM240AA0A1B0GVK7 77 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 LEPP41159 167 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 RNF182Q8N6D2 247 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 ASCL2Q99929 193 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 HIST1H2BKO60814 126 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 PROP1O75360 226 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 HIST1H2BJP06899 126 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 IGLC1P0CG04 106 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 HIST1H2BOP23527 126 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 HIST1H2BBP33778 126 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 LINC00158P58513 81 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 HIST1H2BDP58876 126 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 HIST1H2BCP62807 126 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 HERV-K104P63124 156 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 HIST2H2BEQ16778 126 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.71□□□□□ -1.34
SYNE1-211ENST00000413186 Q6YL49 198 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 BCL6BQ8N143 479 aaPredicted RBP6.71□□□□□ -1.34
SYNE1-211ENST00000413186 TSKUQ8WUA8 353 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 HIST1H2BHQ93079 126 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 HIST1H2BNQ99877 126 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 HIST1H2BMQ99879 126 aa6.71□□□□□ -1.34
SYNE1-211ENST00000413186 TRBV20OR9-2A0A075B6H5 130 aa6.7□□□□□ -1.34
SYNE1-211ENST00000413186 ZNF688P0C7X2 276 aa6.7□□□□□ -1.34
SYNE1-211ENST00000413186 SNHG12Q9BXW3 62 aa6.7□□□□□ -1.34
SYNE1-211ENST00000413186 LINC00587B1AMM8 73 aa6.7□□□□□ -1.34
SYNE1-211ENST00000413186 LY6LH3BQJ8 138 aa6.7□□□□□ -1.34
SYNE1-211ENST00000413186 IGKV3-20P01619 116 aa6.7□□□□□ -1.34
SYNE1-211ENST00000413186 ACYP1P07311 99 aa6.7□□□□□ -1.34
SYNE1-211ENST00000413186 CRYGCP07315 174 aa6.7□□□□□ -1.34
SYNE1-211ENST00000413186 IGFBPL1Q8WX77 278 aa6.7□□□□□ -1.34
SYNE1-211ENST00000413186 CFHR4Q92496 578 aa6.7□□□□□ -1.34
SYNE1-211ENST00000413186 MRPL27Q9P0M9 148 aaKnown RBP6.7□□□□□ -1.34
SYNE1-211ENST00000413186 TRAV13-1A0A0B4J241 112 aa6.7□□□□□ -1.34
SYNE1-211ENST00000413186 SOCS3O14543 225 aa6.7□□□□□ -1.34
SYNE1-211ENST00000413186 C2orf88Q9BSF0 95 aa6.7□□□□□ -1.34
SYNE1-211ENST00000413186 IGLV11-55A0A075B6I3 123 aa6.7□□□□□ -1.34
SYNE1-211ENST00000413186 CRYBA4P53673 196 aa6.7□□□□□ -1.34
SYNE1-211ENST00000413186 FOXA3P55318 350 aaPredicted RBP6.7□□□□□ -1.34
SYNE1-211ENST00000413186 NPC2P61916 151 aa6.7□□□□□ -1.34
SYNE1-211ENST00000413186 RITA1Q96K30 269 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms