RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 TTC32Q5I0X7 151 aa13.1□□□□□ -0.31
PCDHA13-202ENST00000409494 KNCNA6PVL3 124 aa13.1□□□□□ -0.31
PCDHA13-202ENST00000409494 C11orf1Q9H5F2 150 aa13.1□□□□□ -0.31
PCDHA13-202ENST00000409494 CD300EQ496F6 205 aaPredicted RBP13.1□□□□□ -0.31
PCDHA13-202ENST00000409494 ZC2HC1BQ5TFG8 222 aa13.1□□□□□ -0.31
PCDHA13-202ENST00000409494 TEX22C9J3V5 150 aa13.1□□□□□ -0.31
PCDHA13-202ENST00000409494 SFTA2Q6UW10 78 aa13.1□□□□□ -0.31
PCDHA13-202ENST00000409494 SH2D6Q7Z4S9 175 aa13.1□□□□□ -0.31
PCDHA13-202ENST00000409494 TMEM213A2RRL7 107 aa13.09□□□□□ -0.31
PCDHA13-202ENST00000409494 BUB3O43684 328 aa13.09□□□□□ -0.31
PCDHA13-202ENST00000409494 LINC00158P58513 81 aa13.09□□□□□ -0.31
PCDHA13-202ENST00000409494 C4orf3Q8WVX3 66 aa13.09□□□□□ -0.31
PCDHA13-202ENST00000409494 NRGNQ92686 78 aa13.09□□□□□ -0.31
PCDHA13-202ENST00000409494 TMEM243Q9BU79 118 aa13.09□□□□□ -0.31
PCDHA13-202ENST00000409494 AGPAT4-IT1Q9H0P7 198 aa13.09□□□□□ -0.31
PCDHA13-202ENST00000409494 C19orf84I3L1E1 186 aa13.08□□□□□ -0.31
PCDHA13-202ENST00000409494 C11orf71Q6IPW1 123 aa13.08□□□□□ -0.31
PCDHA13-202ENST00000409494 WI2-2373I1.2A0A1W2PRP0 233 aa13.08□□□□□ -0.32
PCDHA13-202ENST00000409494 RHOHQ15669 191 aa13.08□□□□□ -0.32
PCDHA13-202ENST00000409494 KLK9Q9UKQ9 250 aa13.08□□□□□ -0.32
PCDHA13-202ENST00000409494 GP9P14770 177 aa13.08□□□□□ -0.32
PCDHA13-202ENST00000409494 IGLL1P15814 213 aa13.08□□□□□ -0.32
PCDHA13-202ENST00000409494 KIR3DS1Q14943 382 aa13.08□□□□□ -0.32
PCDHA13-202ENST00000409494 IGKV3D-20A0A0C4DH25 116 aa13.07□□□□□ -0.32
PCDHA13-202ENST00000409494 WIPF2Q8TF74 440 aaPredicted RBP13.07□□□□□ -0.32
PCDHA13-202ENST00000409494 NCOR2Q9Y618 2525 aa13.07□□□□□ -0.32
PCDHA13-202ENST00000409494 IGHV1-24A0A0C4DH33 117 aa13.07□□□□□ -0.32
PCDHA13-202ENST00000409494 GAGE12BA1L429 117 aa13.07□□□□□ -0.32
PCDHA13-202ENST00000409494 GAGE7O76087 117 aa13.07□□□□□ -0.32
PCDHA13-202ENST00000409494 GAGE12FP0CL80 117 aa13.07□□□□□ -0.32
PCDHA13-202ENST00000409494 GAGE12GP0CL81 117 aa13.07□□□□□ -0.32
PCDHA13-202ENST00000409494 GAGE12IP0CL82 117 aa13.07□□□□□ -0.32
PCDHA13-202ENST00000409494 STPG4Q8N801 248 aa13.07□□□□□ -0.32
PCDHA13-202ENST00000409494 MED12LQ86YW9 2145 aa13.07□□□□□ -0.32
PCDHA13-202ENST00000409494 SDHAF1A6NFY7 115 aa13.06□□□□□ -0.32
PCDHA13-202ENST00000409494 ZC2HC1AQ96GY0 325 aa13.06□□□□□ -0.32
PCDHA13-202ENST00000409494 EML6Q6ZMW3 1958 aa13.06□□□□□ -0.32
PCDHA13-202ENST00000409494 GAGE13Q4V321 117 aa13.06□□□□□ -0.32
PCDHA13-202ENST00000409494 DYSFO75923 2080 aa13.06□□□□□ -0.32
PCDHA13-202ENST00000409494 GAGE12JA6NER3 117 aa13.06□□□□□ -0.32
PCDHA13-202ENST00000409494 IGLV2-14P01704 120 aa13.06□□□□□ -0.32
PCDHA13-202ENST00000409494 RIPPLY3P57055 190 aa13.06□□□□□ -0.32
PCDHA13-202ENST00000409494 GAGE1Q13065 139 aa13.06□□□□□ -0.32
PCDHA13-202ENST00000409494 GAGE4Q13068 117 aa13.06□□□□□ -0.32
PCDHA13-202ENST00000409494 GAGE5Q13069 117 aa13.06□□□□□ -0.32
PCDHA13-202ENST00000409494 PCNX3Q9H6A9 2034 aa13.06□□□□□ -0.32
PCDHA13-202ENST00000409494 EBI3Q14213 229 aa13.05□□□□□ -0.32
PCDHA13-202ENST00000409494 C2orf66Q6UXQ4 117 aa13.05□□□□□ -0.32
PCDHA13-202ENST00000409494 KIR2DL5BA0A0G2JN68 375 aa13.05□□□□□ -0.32
PCDHA13-202ENST00000409494 KIR2DL5BA0A0G2JPC4 375 aa13.05□□□□□ -0.32
PCDHA13-202ENST00000409494 S100A7L2Q5SY68 101 aa13.05□□□□□ -0.32
PCDHA13-202ENST00000409494 KIR2DL5AQ8N109 375 aa13.05□□□□□ -0.32
PCDHA13-202ENST00000409494 RNASE1P07998 156 aaKnown RBP13.05□□□□□ -0.32
PCDHA13-202ENST00000409494 PHLDA1Q8WV24 401 aaPredicted RBP13.05□□□□□ -0.32
PCDHA13-202ENST00000409494 TIMM21Q9BVV7 248 aa13.05□□□□□ -0.32
PCDHA13-202ENST00000409494 LRP4O75096 1905 aa13.05□□□□□ -0.32
PCDHA13-202ENST00000409494 C2orf70A6NJV1 201 aa13.05□□□□□ -0.32
PCDHA13-202ENST00000409494 IGHV4-31P0DP07 118 aa13.05□□□□□ -0.32
PCDHA13-202ENST00000409494 TRAV2A0A0B4J234 112 aa13.04□□□□□ -0.32
PCDHA13-202ENST00000409494 IGF1P05019 195 aa13.04□□□□□ -0.32
PCDHA13-202ENST00000409494 NPSP0C0P6 89 aa13.04□□□□□ -0.32
PCDHA13-202ENST00000409494 SSBP2P81877 361 aaPredicted RBP13.04□□□□□ -0.32
PCDHA13-202ENST00000409494 TMEM95Q3KNT9 176 aa13.04□□□□□ -0.32
PCDHA13-202ENST00000409494 ASPHD1Q5U4P2 390 aa13.04□□□□□ -0.32
PCDHA13-202ENST00000409494 SLURP1P55000 103 aa13.04□□□□□ -0.32
PCDHA13-202ENST00000409494 CRIP3Q6Q6R5 217 aa13.04□□□□□ -0.32
PCDHA13-202ENST00000409494 C16orf74Q96GX8 76 aa13.04□□□□□ -0.32
PCDHA13-202ENST00000409494 CHD3Q12873 2000 aaKnown RBP13.04□□□□□ -0.32
PCDHA13-202ENST00000409494 IGHG4P01861 327 aa13.04□□□□□ -0.32
PCDHA13-202ENST00000409494 Q6YL49 198 aa13.04□□□□□ -0.32
PCDHA13-202ENST00000409494 DYNAPQ8N1N2 210 aa13.04□□□□□ -0.32
PCDHA13-202ENST00000409494 DNAJC30Q96LL9 226 aa13.04□□□□□ -0.32
PCDHA13-202ENST00000409494 PKIGQ9Y2B9 76 aa13.04□□□□□ -0.32
PCDHA13-202ENST00000409494 TRAV12-2A0A075B6T6 113 aa13.03□□□□□ -0.32
PCDHA13-202ENST00000409494 PMVKQ15126 192 aa13.03□□□□□ -0.32
PCDHA13-202ENST00000409494 OVOL2Q9BRP0 275 aa13.03□□□□□ -0.32
PCDHA13-202ENST00000409494 SMIM2Q9BVW6 85 aa13.03□□□□□ -0.32
PCDHA13-202ENST00000409494 ATRXP46100 2492 aa13.03□□□□□ -0.32
PCDHA13-202ENST00000409494 MRPL51Q4U2R6 128 aaKnown RBP13.03□□□□□ -0.32
PCDHA13-202ENST00000409494 NEGR1Q7Z3B1 354 aa13.03□□□□□ -0.32
PCDHA13-202ENST00000409494 ZNRF2Q8NHG8 242 aa13.03□□□□□ -0.32
PCDHA13-202ENST00000409494 SIGMAR1Q99720 223 aa13.03□□□□□ -0.32
PCDHA13-202ENST00000409494 JPT2Q9H910 190 aa13.03□□□□□ -0.32
PCDHA13-202ENST00000409494 PAX4O43316 350 aa13.03□□□□□ -0.32
PCDHA13-202ENST00000409494 CHAC1Q9BUX1 264 aa13.03□□□□□ -0.32
PCDHA13-202ENST00000409494 RITA1Q96K30 269 aa13.02□□□□□ -0.32
PCDHA13-202ENST00000409494 TRAV13-1A0A0B4J241 112 aa13.02□□□□□ -0.33
PCDHA13-202ENST00000409494 IGHV4OR15-8A0A075B7B6 117 aa13.02□□□□□ -0.33
PCDHA13-202ENST00000409494 A0A087WW49 117 aa13.02□□□□□ -0.33
PCDHA13-202ENST00000409494 CSPG4Q6UVK1 2322 aa13.01□□□□□ -0.33
PCDHA13-202ENST00000409494 TRBV6-1A0A0K0K1D8 114 aa13.01□□□□□ -0.33
PCDHA13-202ENST00000409494 ERG28Q9UKR5 140 aa13.01□□□□□ -0.33
PCDHA13-202ENST00000409494 TP53TG1Q9Y2A0 90 aa13.01□□□□□ -0.33
PCDHA13-202ENST00000409494 P0C879 139 aa13.01□□□□□ -0.33
PCDHA13-202ENST00000409494 DNAJC9-AS1A6NH13 148 aa13.01□□□□□ -0.33
PCDHA13-202ENST00000409494 NUPR1O60356 82 aa13.01□□□□□ -0.33
PCDHA13-202ENST00000409494 SPART-AS1P0CW21 52 aa13.01□□□□□ -0.33
PCDHA13-202ENST00000409494 Q6ZPA2 131 aa13.01□□□□□ -0.33
PCDHA13-202ENST00000409494 MED14OSP0DP75 135 aa13.01□□□□□ -0.33
PCDHA13-202ENST00000409494 KLF5Q13887 457 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms