RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 AURKAIP1Q9NWT8 199 aaPredicted RBP2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 CELSR2Q9HCU4 2923 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 NOTCH1P46531 2555 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 IGHV3-43A0A0B4J1X8 118 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 TRAV41A0A0B4J266 112 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 OR11H12B2RN74 326 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 HIST1H2BKO60814 126 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 HIST1H2BJP06899 126 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 GPX1P07203 203 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 IGHV3-43DP0DP04 118 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 IFITM1P13164 125 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 RPL35AP18077 110 aaKnown RBP2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 HIST1H2BOP23527 126 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 HIST1H2BBP33778 126 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 HIST1H2BDP58876 126 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 HIST1H2BCP62807 126 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 HIST2H2BEQ16778 126 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 MPV17L2Q567V2 206 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 LYZL2Q7Z4W2 148 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 DEFB125Q8N687 156 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 OR11H1Q8NG94 326 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 OR11H2Q8NH07 326 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 ARPC1AQ92747 370 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 HIST1H2BHQ93079 126 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 RITA1Q96K30 269 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 HIST1H2BNQ99877 126 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 HIST1H2BMQ99879 126 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 PPDPFQ9H3Y8 114 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 CSDC2Q9Y534 153 aaKnown RBP2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 IGHV3-72A0A0B4J1Y9 119 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 TRAV8-6A0A0B4J262 113 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 IGSF23A1L1A6 192 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 A8MWL6 223 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 H3BRN7 92 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 COX7A2P2O60397 106 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 NDUFC2O95298 119 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 DIAPH2-AS1Q14236 149 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 BEAN1Q3B7T3 259 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 TMEM136Q6ZRR5 245 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 STPG4Q8N801 248 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 GNPNAT1Q96EK6 184 aaPredicted RBP2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 CCDC140Q96MF4 163 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 SMIM7Q9BQ49 75 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 MAP1LC3CQ9BXW4 147 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 TNFRSF18Q9Y5U5 241 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 IGKV3-7A0A075B6H7 116 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 NPPCP23582 126 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 PSMB2P49721 201 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 HRCT1Q6UXD1 115 aa2.81□□□□□ -1.96
FNDC3A-202ENST00000398316 IGLC2P0DOY2 106 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 PMCHL1Q16048 86 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 TCTEX1D4Q5JR98 221 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 Q6ZSV7 163 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 SRSF12Q8WXF0 261 aaKnown RBP2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 FAM167A-AS1Q96KT0 104 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 TINCRA0A1B0GVN0 87 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 NHLRC4P0CG21 123 aaPredicted RBP2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 SRSF3P84103 164 aaKnown RBP2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 EWSR1Q01844 656 aaKnown RBP eCLIP2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 PPP1R1CQ8WVI7 109 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 C20orf144Q9BQM9 153 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 PLA2G2EQ9NZK7 142 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 C9JAW5 83 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 E7EUB6 86 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 GAGE2AQ6NT46 116 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 OR5A1Q8NGJ0 315 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 HIGD1AQ9Y241 93 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 LINC01619G3V211 115 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 ZNF324O75467 553 aaPredicted RBP2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 CX3CL1P78423 397 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 TAL2Q16559 108 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 HIST2H2BDQ6DRA6 164 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 ATP5L2Q7Z4Y8 100 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 NAT8BQ9UHF3 227 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 RELNP78509 3460 aa2.8□□□□□ -1.96
FNDC3A-202ENST00000398316 TRGV2A0A075B6R0 118 aa2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 IGKV1-17P01599 117 aa2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 IGHV3-7P01780 117 aa2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 APOHP02749 345 aaPredicted RBP2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 SMIM13P0DJ93 91 aa2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 GP9P14770 177 aa2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 NKX2-1P43699 371 aaPredicted RBP2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 C1QL4Q86Z23 238 aa2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 GLMPQ8WWB7 406 aa2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 MS4A6AQ9H2W1 248 aa2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 WFDC1Q9HC57 220 aa2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 RFNGQ9Y644 331 aa2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 DNAH9Q9NYC9 4486 aa2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 RS1O15537 224 aa2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 CTSGP08311 255 aa2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 PSG9Q00887 426 aa2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 DUX3Q96PT4 197 aa2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 SLC25A39Q9BZJ4 359 aaPredicted RBP2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 MRPL18Q9H0U6 180 aaKnown RBP2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 NPVFQ9HCQ7 196 aa2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 VAX2Q9UIW0 290 aa2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 IGKV1OR2-108A0A075B7D4 117 aa2.79□□□□□ -1.96
FNDC3A-202ENST00000398316 F8WDY8 70 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms