RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 LENEPQ9Y5L5 61 aa6.05□□□□□ -1.44
ATG4A-205ENST00000394892 TMEM238LA0A1B0GVL6 79 aa6.04□□□□□ -1.44
ATG4A-205ENST00000394892 GGTLC3B5MD39 225 aa6.04□□□□□ -1.44
ATG4A-205ENST00000394892 PAX4O43316 350 aa6.04□□□□□ -1.44
ATG4A-205ENST00000394892 GCHFRP30047 84 aa6.04□□□□□ -1.44
ATG4A-205ENST00000394892 RPL7L1Q6DKI1 246 aaKnown RBP6.04□□□□□ -1.44
ATG4A-205ENST00000394892 LYPD5Q6UWN5 251 aa6.04□□□□□ -1.44
ATG4A-205ENST00000394892 DPPA3Q6W0C5 159 aa6.04□□□□□ -1.44
ATG4A-205ENST00000394892 SPATA12Q7Z6I5 190 aa6.04□□□□□ -1.44
ATG4A-205ENST00000394892 MED28Q9H204 178 aa6.04□□□□□ -1.44
ATG4A-205ENST00000394892 FAT1Q14517 4588 aa6.03□□□□□ -1.44
ATG4A-205ENST00000394892 LOC100131303A0A0U1RQF7 123 aa6.03□□□□□ -1.44
ATG4A-205ENST00000394892 NXPH4O95158 308 aa6.03□□□□□ -1.44
ATG4A-205ENST00000394892 TCRAP04437 139 aa6.03□□□□□ -1.44
ATG4A-205ENST00000394892 TYMSP04818 313 aa6.03□□□□□ -1.44
ATG4A-205ENST00000394892 GIPP09681 153 aaPredicted RBP6.03□□□□□ -1.44
ATG4A-205ENST00000394892 FUSP35637 526 aaKnown RBP eCLIP6.03□□□□□ -1.44
ATG4A-205ENST00000394892 CDC34P49427 236 aaPredicted RBP6.03□□□□□ -1.44
ATG4A-205ENST00000394892 LINC00315P59091 139 aa6.03□□□□□ -1.44
ATG4A-205ENST00000394892 ZNF415Q09FC8 603 aa6.03□□□□□ -1.44
ATG4A-205ENST00000394892 TTC32Q5I0X7 151 aa6.03□□□□□ -1.44
ATG4A-205ENST00000394892 IQCF2Q8IXL9 164 aa6.03□□□□□ -1.44
ATG4A-205ENST00000394892 ARL6IP6Q8N6S5 226 aa6.03□□□□□ -1.44
ATG4A-205ENST00000394892 TMEM75Q8N9X5 138 aa6.03□□□□□ -1.44
ATG4A-205ENST00000394892 LINC00479Q96M42 142 aa6.03□□□□□ -1.44
ATG4A-205ENST00000394892 PSMG3Q9BT73 122 aaPredicted RBP6.03□□□□□ -1.44
ATG4A-205ENST00000394892 CYTL1Q9NRR1 136 aa6.03□□□□□ -1.44
ATG4A-205ENST00000394892 PRO0255Q9UI72 69 aa6.03□□□□□ -1.44
ATG4A-205ENST00000394892 TNFSF18Q9UNG2 199 aa6.03□□□□□ -1.44
ATG4A-205ENST00000394892 HHLA3Q9XRX5 114 aa6.03□□□□□ -1.44
ATG4A-205ENST00000394892 A0A1W2PPQ1 181 aa6.02□□□□□ -1.45
ATG4A-205ENST00000394892 A0A1W2PPV4 95 aa6.02□□□□□ -1.45
ATG4A-205ENST00000394892 K7EQD1 137 aa6.02□□□□□ -1.45
ATG4A-205ENST00000394892 SPXQ9BT56 116 aa6.02□□□□□ -1.45
ATG4A-205ENST00000394892 TREM1Q9NP99 234 aa6.02□□□□□ -1.45
ATG4A-205ENST00000394892 NAGKQ9UJ70 344 aa6.02□□□□□ -1.45
ATG4A-205ENST00000394892 ICOSQ9Y6W8 199 aa6.02□□□□□ -1.45
ATG4A-205ENST00000394892 TRGV11A0A075B6L2 103 aa6.01□□□□□ -1.45
ATG4A-205ENST00000394892 TRAV34A0A0B4J273 112 aa6.01□□□□□ -1.45
ATG4A-205ENST00000394892 TRAV21A0A0B4J279 112 aa6.01□□□□□ -1.45
ATG4A-205ENST00000394892 A6NJY4 79 aa6.01□□□□□ -1.45
ATG4A-205ENST00000394892 EPM2AB3EWF7 344 aa6.01□□□□□ -1.45
ATG4A-205ENST00000394892 SMLR1H3BR10 107 aa6.01□□□□□ -1.45
ATG4A-205ENST00000394892 SIVA1O15304 175 aa6.01□□□□□ -1.45
ATG4A-205ENST00000394892 SUMO1P63165 101 aaKnown RBP6.01□□□□□ -1.45
ATG4A-205ENST00000394892 FAM159AQ6UWV7 190 aa6.01□□□□□ -1.45
ATG4A-205ENST00000394892 C5orf17Q8NAS9 161 aa6.01□□□□□ -1.45
ATG4A-205ENST00000394892 CMTM2Q8TAZ6 248 aa6.01□□□□□ -1.45
ATG4A-205ENST00000394892 EPDR1Q9UM22 224 aa6.01□□□□□ -1.45
ATG4A-205ENST00000394892 PSG8Q9UQ74 426 aa6.01□□□□□ -1.45
ATG4A-205ENST00000394892 FXYD6-FXYD2A0A087WZ82 144 aa6□□□□□ -1.45
ATG4A-205ENST00000394892 TRAV4A0A0B4J268 109 aa6□□□□□ -1.45
ATG4A-205ENST00000394892 M0R2P5 195 aa6□□□□□ -1.45
ATG4A-205ENST00000394892 RNASE3P12724 160 aaKnown RBP6□□□□□ -1.45
ATG4A-205ENST00000394892 GYPEP15421 78 aa6□□□□□ -1.45
ATG4A-205ENST00000394892 GATA1P15976 413 aaPredicted RBP6□□□□□ -1.45
ATG4A-205ENST00000394892 BTF3P20290 206 aaKnown RBP6□□□□□ -1.45
ATG4A-205ENST00000394892 SERF2P84101 59 aa6□□□□□ -1.45
ATG4A-205ENST00000394892 MRPL23Q16540 153 aaKnown RBP6□□□□□ -1.45
ATG4A-205ENST00000394892 LCE2CQ5TA81 110 aa6□□□□□ -1.45
ATG4A-205ENST00000394892 Q6ZSN1 163 aa6□□□□□ -1.45
ATG4A-205ENST00000394892 WFDC10BQ8IUB3 73 aa6□□□□□ -1.45
ATG4A-205ENST00000394892 OR2T35Q8NGX2 323 aa6□□□□□ -1.45
ATG4A-205ENST00000394892 C9orf85Q96MD7 179 aa6□□□□□ -1.45
ATG4A-205ENST00000394892 Q9UF83 564 aa6□□□□□ -1.45
ATG4A-205ENST00000394892 IGKV3D-20A0A0C4DH25 116 aa5.99□□□□□ -1.45
ATG4A-205ENST00000394892 TRGV4A0A0C4DH28 118 aa5.99□□□□□ -1.45
ATG4A-205ENST00000394892 PGPEP1LA6NFU8 196 aa5.99□□□□□ -1.45
ATG4A-205ENST00000394892 EREGO14944 169 aa5.99□□□□□ -1.45
ATG4A-205ENST00000394892 RS1O15537 224 aa5.99□□□□□ -1.45
ATG4A-205ENST00000394892 GCGP01275 180 aa5.99□□□□□ -1.45
ATG4A-205ENST00000394892 CRIP1P50238 77 aa5.99□□□□□ -1.45
ATG4A-205ENST00000394892 FGF8P55075 233 aaPredicted RBP5.99□□□□□ -1.45
ATG4A-205ENST00000394892 FLI1Q01543 452 aaPredicted RBP5.99□□□□□ -1.45
ATG4A-205ENST00000394892 SLAQ13239 276 aa5.99□□□□□ -1.45
ATG4A-205ENST00000394892 FAM74A1Q5RGS3 127 aa5.99□□□□□ -1.45
ATG4A-205ENST00000394892 CFAP126Q5VTH2 177 aa5.99□□□□□ -1.45
ATG4A-205ENST00000394892 NEGR1Q7Z3B1 354 aa5.99□□□□□ -1.45
ATG4A-205ENST00000394892 PRNTQ86SH4 94 aa5.99□□□□□ -1.45
ATG4A-205ENST00000394892 OR11H4Q8NGC9 324 aa5.99□□□□□ -1.45
ATG4A-205ENST00000394892 ASB13Q8WXK3 278 aa5.99□□□□□ -1.45
ATG4A-205ENST00000394892 ACTR3CQ9C0K3 210 aaPredicted RBP5.99□□□□□ -1.45
ATG4A-205ENST00000394892 DNAH8Q96JB1 4490 aa5.99□□□□□ -1.45
ATG4A-205ENST00000394892 A0A1W2PRE2 83 aa5.98□□□□□ -1.45
ATG4A-205ENST00000394892 FAM74A7A6NL05 159 aa5.98□□□□□ -1.45
ATG4A-205ENST00000394892 CXorf1O96002 111 aa5.98□□□□□ -1.45
ATG4A-205ENST00000394892 MBP02144 154 aa5.98□□□□□ -1.45
ATG4A-205ENST00000394892 PFN1P07737 140 aaKnown RBP5.98□□□□□ -1.45
ATG4A-205ENST00000394892 DNAH10OSP0CZ25 163 aa5.98□□□□□ -1.45
ATG4A-205ENST00000394892 INAFM2P0DMQ5 153 aa5.98□□□□□ -1.45
ATG4A-205ENST00000394892 FHITP49789 147 aa5.98□□□□□ -1.45
ATG4A-205ENST00000394892 CYB561D1Q8N8Q1 229 aa5.98□□□□□ -1.45
ATG4A-205ENST00000394892 OR4C5Q8NGB2 326 aa5.98□□□□□ -1.45
ATG4A-205ENST00000394892 JPT2Q9H910 190 aa5.98□□□□□ -1.45
ATG4A-205ENST00000394892 SDF2L1Q9HCN8 221 aa5.98□□□□□ -1.45
ATG4A-205ENST00000394892 TMEM167BQ9NRX6 74 aa5.98□□□□□ -1.45
ATG4A-205ENST00000394892 IGHV3-73A0A0B4J1V6 119 aa5.97□□□□□ -1.45
ATG4A-205ENST00000394892 CTXND1A0A1B0GTU2 59 aa5.97□□□□□ -1.45
ATG4A-205ENST00000394892 SERTM2A0A1B0GWG4 89 aa5.97□□□□□ -1.45
ATG4A-205ENST00000394892 C9JCJ5 164 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms