RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 NPIPB3Q92617 1050 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 CHCHD5Q9BSY4 110 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 RPRMQ9NS64 109 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 SYS1-DBNDD2H3BUS1 97 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 CD7P09564 240 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 SPSB3Q6PJ21 355 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 TIMM17AQ99595 171 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 TMEM222Q9H0R3 208 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 IL36BQ9NZH7 164 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 IL36RNQ9UBH0 155 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 C17orf51A8MQB3 221 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 COX8AP10176 69 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 C2orf82Q6UX34 121 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 IGHV3-11P01762 117 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 PRB2P02812 416 aaPredicted RBP6.39□□□□□ -1.39
LIMS1-203ENST00000393310 ACYP1P07311 99 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 NMSQ5H8A3 153 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 TMEM170BQ5T4T1 132 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 NUP35Q8NFH5 326 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 A6NDX4 124 aa6.38□□□□□ -1.39
LIMS1-203ENST00000393310 M0R3E3 92 aa6.38□□□□□ -1.39
LIMS1-203ENST00000393310 PDCD6O75340 191 aa6.38□□□□□ -1.39
LIMS1-203ENST00000393310 P0DMU3 169 aa6.38□□□□□ -1.39
LIMS1-203ENST00000393310 FAM231AP0DMU4 169 aa6.38□□□□□ -1.39
LIMS1-203ENST00000393310 FAM231CP0DMU5 169 aa6.38□□□□□ -1.39
LIMS1-203ENST00000393310 RPL23P62829 140 aaKnown RBP6.38□□□□□ -1.39
LIMS1-203ENST00000393310 SERF2P84101 59 aa6.38□□□□□ -1.39
LIMS1-203ENST00000393310 IGHV3-72A0A0B4J1Y9 119 aa6.38□□□□□ -1.39
LIMS1-203ENST00000393310 CTXND1A0A1B0GTU2 59 aa6.38□□□□□ -1.39
LIMS1-203ENST00000393310 DNAL4O96015 105 aa6.38□□□□□ -1.39
LIMS1-203ENST00000393310 RNASE2P10153 161 aaKnown RBP6.38□□□□□ -1.39
LIMS1-203ENST00000393310 PRB4P10163 310 aaPredicted RBP6.38□□□□□ -1.39
LIMS1-203ENST00000393310 GNB1LQ9BYB4 327 aa6.38□□□□□ -1.39
LIMS1-203ENST00000393310 MGAQ8IWI9 3026 aa6.38□□□□□ -1.39
LIMS1-203ENST00000393310 TRAV12-2A0A075B6T6 113 aa6.38□□□□□ -1.39
LIMS1-203ENST00000393310 BTCP35070 178 aa6.38□□□□□ -1.39
LIMS1-203ENST00000393310 SUMO2P61956 95 aaKnown RBP6.38□□□□□ -1.39
LIMS1-203ENST00000393310 ICAM4Q14773 271 aa6.38□□□□□ -1.39
LIMS1-203ENST00000393310 ZNF837Q96EG3 531 aaPredicted RBP6.38□□□□□ -1.39
LIMS1-203ENST00000393310 GAFA1Q96PS6 74 aa6.38□□□□□ -1.39
LIMS1-203ENST00000393310 RTBDNQ9BSG5 229 aaPredicted RBP6.38□□□□□ -1.39
LIMS1-203ENST00000393310 ZNF469Q96JG9 3925 aaPredicted RBP6.38□□□□□ -1.39
LIMS1-203ENST00000393310 H0YJW9 148 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 BUB1B-PAK6H3BSN5 160 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 AMTNQ6UX39 209 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 PIFOQ8TCI5 191 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 TSKUQ8WUA8 353 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 RNF126Q9BV68 326 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 MED12Q93074 2177 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 KMT2BQ9UMN6 2715 aaPredicted RBP6.37□□□□□ -1.39
LIMS1-203ENST00000393310 TRBV4-1A0A0J9YWV2 114 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 J3QQQ9 107 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 TCRAP04437 139 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 PI3P19957 117 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 IGKV1D-42A0A075B6H8 117 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 C9JQL5 133 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 HIST1H4AP62805 103 aaKnown RBP6.37□□□□□ -1.39
LIMS1-203ENST00000393310 ATXN8Q156A1 80 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 WFDC3Q8IUB2 231 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 LINC00479Q96M42 142 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 C9orf85Q96MD7 179 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 LINC00527Q9UJ94 153 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 IGSF10Q6WRI0 2623 aa6.37□□□□□ -1.39
LIMS1-203ENST00000393310 hADV29S1A0JD25 119 aa6.36□□□□□ -1.39
LIMS1-203ENST00000393310 ZNF493Q6ZR52 646 aa6.36□□□□□ -1.39
LIMS1-203ENST00000393310 IGFBPL1Q8WX77 278 aa6.36□□□□□ -1.39
LIMS1-203ENST00000393310 IMUPQ9GZP8 106 aa6.36□□□□□ -1.39
LIMS1-203ENST00000393310 SLC25A22Q9H936 323 aa6.36□□□□□ -1.39
LIMS1-203ENST00000393310 LHFPL6Q9Y693 200 aa6.36□□□□□ -1.39
LIMS1-203ENST00000393310 TRBV20OR9-2A0A075B6H5 130 aa6.36□□□□□ -1.39
LIMS1-203ENST00000393310 A0A087WWL8 130 aa6.36□□□□□ -1.39
LIMS1-203ENST00000393310 LINC00336Q6ZUF6 198 aa6.36□□□□□ -1.39
LIMS1-203ENST00000393310 SPTSSBQ8NFR3 76 aa6.36□□□□□ -1.39
LIMS1-203ENST00000393310 TIMM17BO60830 172 aa6.36□□□□□ -1.39
LIMS1-203ENST00000393310 COX7CP15954 63 aa6.36□□□□□ -1.39
LIMS1-203ENST00000393310 FOXL2NBQ6ZUU3 175 aa6.36□□□□□ -1.39
LIMS1-203ENST00000393310 LINC00526Q96FQ7 95 aa6.36□□□□□ -1.39
LIMS1-203ENST00000393310 TRAV26-2A0A0B4J265 109 aa6.36□□□□□ -1.39
LIMS1-203ENST00000393310 GCHFRP30047 84 aa6.36□□□□□ -1.39
LIMS1-203ENST00000393310 LINC01620Q4KN68 170 aa6.36□□□□□ -1.39
LIMS1-203ENST00000393310 RMI2Q96E14 147 aa6.36□□□□□ -1.39
LIMS1-203ENST00000393310 NPPCP23582 126 aa6.35□□□□□ -1.39
LIMS1-203ENST00000393310 KISS1Q15726 138 aa6.35□□□□□ -1.39
LIMS1-203ENST00000393310 CHCHD1Q96BP2 118 aaKnown RBP6.35□□□□□ -1.39
LIMS1-203ENST00000393310 AGMATQ9BSE5 352 aa6.35□□□□□ -1.39
LIMS1-203ENST00000393310 PCSK5Q92824 1860 aa6.35□□□□□ -1.39
LIMS1-203ENST00000393310 LAIR2Q6ISS4 152 aa6.35□□□□□ -1.39
LIMS1-203ENST00000393310 C11orf45Q8TAV5 145 aa6.35□□□□□ -1.39
LIMS1-203ENST00000393310 FMC1Q96HJ9 113 aa6.35□□□□□ -1.39
LIMS1-203ENST00000393310 SPRY2O43597 315 aa6.35□□□□□ -1.39
LIMS1-203ENST00000393310 SLC25A20O43772 301 aa6.35□□□□□ -1.39
LIMS1-203ENST00000393310 TNFRSF12AQ9NP84 129 aa6.35□□□□□ -1.39
LIMS1-203ENST00000393310 ESM1Q9NQ30 184 aa6.35□□□□□ -1.39
LIMS1-203ENST00000393310 IGHV1-24A0A0C4DH33 117 aa6.34□□□□□ -1.39
LIMS1-203ENST00000393310 C17orf98A8MV24 154 aa6.34□□□□□ -1.39
LIMS1-203ENST00000393310 IGHG2P01859 326 aa6.34□□□□□ -1.39
LIMS1-203ENST00000393310 CHAC1Q9BUX1 264 aa6.34□□□□□ -1.39
LIMS1-203ENST00000393310 SERP1Q9Y6X1 66 aa6.34□□□□□ -1.39
LIMS1-203ENST00000393310 IGLV1-36A0A0B4J1U3 117 aa6.34□□□□□ -1.39
LIMS1-203ENST00000393310 NDUFS5O43920 106 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms