RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 HSD52Q0P140 79 aa9.35□□□□□ -0.91
CAPRIN1-202ENST00000389645 FAM104BQ5XKR9 115 aa9.35□□□□□ -0.91
CAPRIN1-202ENST00000389645 Q6AWC8 147 aa9.35□□□□□ -0.91
CAPRIN1-202ENST00000389645 OR2K2Q8NGT1 345 aa9.35□□□□□ -0.91
CAPRIN1-202ENST00000389645 EEF1AKMT3Q96AZ1 226 aa9.35□□□□□ -0.91
CAPRIN1-202ENST00000389645 NOTCH2Q04721 2471 aa9.34□□□□□ -0.91
CAPRIN1-202ENST00000389645 UBE2E1P51965 193 aa9.34□□□□□ -0.91
CAPRIN1-202ENST00000389645 C12orf54Q6X4T0 127 aa9.34□□□□□ -0.91
CAPRIN1-202ENST00000389645 AJUBAQ96IF1 538 aa9.34□□□□□ -0.91
CAPRIN1-202ENST00000389645 KLK15Q9H2R5 256 aa9.34□□□□□ -0.91
CAPRIN1-202ENST00000389645 HIST2H2BCQ6DN03 193 aa9.34□□□□□ -0.91
CAPRIN1-202ENST00000389645 PET117Q6UWS5 81 aa9.34□□□□□ -0.91
CAPRIN1-202ENST00000389645 SMAD5-AS1Q9Y6J3 95 aa9.34□□□□□ -0.91
CAPRIN1-202ENST00000389645 CENPVL3A0A0U1RRI6 287 aa9.33□□□□□ -0.92
CAPRIN1-202ENST00000389645 MRPS12O15235 138 aaKnown RBP9.33□□□□□ -0.92
CAPRIN1-202ENST00000389645 SH2D6Q7Z4S9 175 aa9.33□□□□□ -0.92
CAPRIN1-202ENST00000389645 MXRA5Q9NR99 2828 aa9.33□□□□□ -0.92
CAPRIN1-202ENST00000389645 GAGE12HA6NDE8 117 aa9.33□□□□□ -0.92
CAPRIN1-202ENST00000389645 M0R381 172 aa9.33□□□□□ -0.92
CAPRIN1-202ENST00000389645 CD5LO43866 347 aa9.33□□□□□ -0.92
CAPRIN1-202ENST00000389645 ZNF747Q9BV97 191 aa9.33□□□□□ -0.92
CAPRIN1-202ENST00000389645 NPFFR1Q9GZQ6 430 aa9.33□□□□□ -0.92
CAPRIN1-202ENST00000389645 ST20Q9HBF5 79 aa9.33□□□□□ -0.92
CAPRIN1-202ENST00000389645 KMT2BQ9UMN6 2715 aaPredicted RBP9.33□□□□□ -0.92
CAPRIN1-202ENST00000389645 TRAV26-2A0A0B4J265 109 aa9.32□□□□□ -0.92
CAPRIN1-202ENST00000389645 OOSP1A8MZH6 123 aa9.32□□□□□ -0.92
CAPRIN1-202ENST00000389645 FAM110DQ8TAY7 271 aaPredicted RBP9.32□□□□□ -0.92
CAPRIN1-202ENST00000389645 A0A0G2JLM5 398 aa9.32□□□□□ -0.92
CAPRIN1-202ENST00000389645 GAS8-AS1O95177 125 aa9.32□□□□□ -0.92
CAPRIN1-202ENST00000389645 Q6ZQT7 251 aa9.32□□□□□ -0.92
CAPRIN1-202ENST00000389645 MAP1LC3AQ9H492 121 aa9.32□□□□□ -0.92
CAPRIN1-202ENST00000389645 ITPR2Q14571 2701 aa9.32□□□□□ -0.92
CAPRIN1-202ENST00000389645 ZNF469Q96JG9 3925 aaPredicted RBP9.32□□□□□ -0.92
CAPRIN1-202ENST00000389645 A6NJY4 79 aa9.32□□□□□ -0.92
CAPRIN1-202ENST00000389645 BUB3O43684 328 aa9.32□□□□□ -0.92
CAPRIN1-202ENST00000389645 ZNF502Q8TBZ5 544 aa9.32□□□□□ -0.92
CAPRIN1-202ENST00000389645 TRAV41A0A0B4J266 112 aa9.31□□□□□ -0.92
CAPRIN1-202ENST00000389645 HBDP02042 147 aa9.31□□□□□ -0.92
CAPRIN1-202ENST00000389645 ARL3P36405 182 aa9.31□□□□□ -0.92
CAPRIN1-202ENST00000389645 LEPP41159 167 aa9.31□□□□□ -0.92
CAPRIN1-202ENST00000389645 AGPAT4-IT1Q9H0P7 198 aa9.31□□□□□ -0.92
CAPRIN1-202ENST00000389645 A0A1B0GW15 77 aa9.31□□□□□ -0.92
CAPRIN1-202ENST00000389645 H3BVH4 76 aa9.31□□□□□ -0.92
CAPRIN1-202ENST00000389645 IGHV4-38-2P0DP08 117 aa9.31□□□□□ -0.92
CAPRIN1-202ENST00000389645 PAX8Q06710 450 aa9.31□□□□□ -0.92
CAPRIN1-202ENST00000389645 IFI27L1Q96BM0 104 aa9.31□□□□□ -0.92
CAPRIN1-202ENST00000389645 H3BUX3 64 aa9.3□□□□□ -0.92
CAPRIN1-202ENST00000389645 INSL3P51460 131 aa9.3□□□□□ -0.92
CAPRIN1-202ENST00000389645 RPS20P60866 119 aaKnown RBP9.3□□□□□ -0.92
CAPRIN1-202ENST00000389645 PRRC2AP48634 2157 aaKnown RBP9.3□□□□□ -0.92
CAPRIN1-202ENST00000389645 HIST1H1AQ02539 215 aaPredicted RBP9.3□□□□□ -0.92
CAPRIN1-202ENST00000389645 KIR3DS1Q14943 382 aa9.3□□□□□ -0.92
CAPRIN1-202ENST00000389645 C8orf86Q6ZUL3 223 aa9.3□□□□□ -0.92
CAPRIN1-202ENST00000389645 CCDC140Q96MF4 163 aa9.3□□□□□ -0.92
CAPRIN1-202ENST00000389645 IGKV3-20P01619 116 aa9.3□□□□□ -0.92
CAPRIN1-202ENST00000389645 TRBV12-3P01733 135 aa9.3□□□□□ -0.92
CAPRIN1-202ENST00000389645 BOD1L2Q8IYS8 172 aa9.3□□□□□ -0.92
CAPRIN1-202ENST00000389645 AVPP01185 164 aa9.29□□□□□ -0.92
CAPRIN1-202ENST00000389645 MGPP08493 103 aa9.29□□□□□ -0.92
CAPRIN1-202ENST00000389645 ETDBQ3ZM63 59 aa9.29□□□□□ -0.92
CAPRIN1-202ENST00000389645 ADAMTSL5Q6ZMM2 481 aa9.29□□□□□ -0.92
CAPRIN1-202ENST00000389645 WFDC2Q14508 124 aa9.29□□□□□ -0.92
CAPRIN1-202ENST00000389645 Q8N6K4 173 aa9.29□□□□□ -0.92
CAPRIN1-202ENST00000389645 SMPXQ9UHP9 88 aa9.29□□□□□ -0.92
CAPRIN1-202ENST00000389645 B5MCH6 92 aa9.29□□□□□ -0.92
CAPRIN1-202ENST00000389645 F6UB75 175 aa9.29□□□□□ -0.92
CAPRIN1-202ENST00000389645 K7EP34 96 aa9.29□□□□□ -0.92
CAPRIN1-202ENST00000389645 K7ERJ3 54 aa9.29□□□□□ -0.92
CAPRIN1-202ENST00000389645 TGFAP01135 160 aa9.29□□□□□ -0.92
CAPRIN1-202ENST00000389645 TMEM95Q3KNT9 176 aa9.29□□□□□ -0.92
CAPRIN1-202ENST00000389645 TMEM97Q5BJF2 176 aa9.29□□□□□ -0.92
CAPRIN1-202ENST00000389645 UFSP1Q6NVU6 142 aa9.29□□□□□ -0.92
CAPRIN1-202ENST00000389645 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.29□□□□□ -0.92
CAPRIN1-202ENST00000389645 SMIM20Q8N5G0 67 aa9.29□□□□□ -0.92
CAPRIN1-202ENST00000389645 DKK2Q9UBU2 259 aa9.29□□□□□ -0.92
CAPRIN1-202ENST00000389645 NEGR1Q7Z3B1 354 aa9.28□□□□□ -0.92
CAPRIN1-202ENST00000389645 RNF183Q96D59 192 aa9.28□□□□□ -0.92
CAPRIN1-202ENST00000389645 GCN1Q92616 2671 aaKnown RBP9.28□□□□□ -0.92
CAPRIN1-202ENST00000389645 BLCAPP62952 87 aa9.28□□□□□ -0.92
CAPRIN1-202ENST00000389645 FOXC2Q99958 501 aa9.28□□□□□ -0.92
CAPRIN1-202ENST00000389645 SLC50A1Q9BRV3 221 aa9.28□□□□□ -0.92
CAPRIN1-202ENST00000389645 TTTY13Q9BZ97 58 aa9.28□□□□□ -0.92
CAPRIN1-202ENST00000389645 TMEM160Q9NX00 188 aa9.28□□□□□ -0.92
CAPRIN1-202ENST00000389645 TNFRSF6BO95407 300 aa9.28□□□□□ -0.92
CAPRIN1-202ENST00000389645 IGF1P05019 195 aa9.28□□□□□ -0.92
CAPRIN1-202ENST00000389645 MOB4Q9Y3A3 225 aa9.28□□□□□ -0.92
CAPRIN1-202ENST00000389645 MSMBP08118 114 aa9.27□□□□□ -0.93
CAPRIN1-202ENST00000389645 AMTNQ6UX39 209 aa9.27□□□□□ -0.93
CAPRIN1-202ENST00000389645 UNQ9165/PRO28630Q6UXU0 137 aa9.27□□□□□ -0.93
CAPRIN1-202ENST00000389645 IGHV1-69DA0A0B4J2H0 117 aa9.27□□□□□ -0.93
CAPRIN1-202ENST00000389645 IGHV1-69P01742 117 aa9.27□□□□□ -0.93
CAPRIN1-202ENST00000389645 FASNP49327 2511 aaKnown RBP9.27□□□□□ -0.93
CAPRIN1-202ENST00000389645 HECTD1Q9ULT8 2610 aa9.27□□□□□ -0.93
CAPRIN1-202ENST00000389645 IGHG4P01861 327 aa9.26□□□□□ -0.93
CAPRIN1-202ENST00000389645 RNASE4P34096 147 aaKnown RBP9.26□□□□□ -0.93
CAPRIN1-202ENST00000389645 EBI3Q14213 229 aa9.26□□□□□ -0.93
CAPRIN1-202ENST00000389645 CD300EQ496F6 205 aaPredicted RBP9.26□□□□□ -0.93
CAPRIN1-202ENST00000389645 C9orf118A6NHY6 69 aa9.26□□□□□ -0.93
CAPRIN1-202ENST00000389645 LINC01545Q5VT33 79 aa9.26□□□□□ -0.93
CAPRIN1-202ENST00000389645 C5orf56Q8N8D9 126 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms