RNA–Protein interactions for RNA: ENST00000381718.7

NUP58-201, Transcript of nucleoporin 58, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene NUP58, Length 2,489 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-201ENST00000381718 FOXC2Q99958 501 aa12.18□□□□□ -0.46
NUP58-201ENST00000381718 SELENOKQ9Y6D0 94 aa12.17□□□□□ -0.46
NUP58-201ENST00000381718 SYS1-DBNDD2H3BUS1 97 aa12.17□□□□□ -0.46
NUP58-201ENST00000381718 NPYP01303 97 aa12.17□□□□□ -0.46
NUP58-201ENST00000381718 MED14OSP0DP75 135 aa12.17□□□□□ -0.46
NUP58-201ENST00000381718 LINC00173Q6ZV60 143 aa12.17□□□□□ -0.46
NUP58-201ENST00000381718 SPATA12Q7Z6I5 190 aa12.17□□□□□ -0.46
NUP58-201ENST00000381718 ODF3Q96PU9 254 aa12.17□□□□□ -0.46
NUP58-201ENST00000381718 HSPB8Q9UJY1 196 aa12.17□□□□□ -0.46
NUP58-201ENST00000381718 LINC01546A6NGU7 62 aa12.16□□□□□ -0.46
NUP58-201ENST00000381718 A0A096LNJ9 63 aa12.16□□□□□ -0.46
NUP58-201ENST00000381718 TCF21O43680 179 aa12.16□□□□□ -0.46
NUP58-201ENST00000381718 TCTEX1D4Q5JR98 221 aa12.16□□□□□ -0.46
NUP58-201ENST00000381718 C4orf3Q8WVX3 66 aa12.16□□□□□ -0.46
NUP58-201ENST00000381718 MIEN1Q9BRT3 115 aa12.16□□□□□ -0.46
NUP58-201ENST00000381718 SCRT2Q9NQ03 307 aa12.16□□□□□ -0.46
NUP58-201ENST00000381718 SMKR1H3BMG3 65 aa12.15□□□□□ -0.46
NUP58-201ENST00000381718 KIR3DS1Q14943 382 aa12.15□□□□□ -0.46
NUP58-201ENST00000381718 ADAMTSL5Q6ZMM2 481 aa12.15□□□□□ -0.46
NUP58-201ENST00000381718 EVI2AP22794 236 aa12.15□□□□□ -0.46
NUP58-201ENST00000381718 RNASE4P34096 147 aaKnown RBP12.15□□□□□ -0.46
NUP58-201ENST00000381718 SNRPD3P62318 126 aaKnown RBP12.15□□□□□ -0.46
NUP58-201ENST00000381718 WFDC3Q8IUB2 231 aa12.15□□□□□ -0.46
NUP58-201ENST00000381718 HELZ2Q9BYK8 2649 aaKnown RBP12.14□□□□□ -0.47
NUP58-201ENST00000381718 DNAJC9-AS1A6NH13 148 aa12.14□□□□□ -0.47
NUP58-201ENST00000381718 H3BVH4 76 aa12.14□□□□□ -0.47
NUP58-201ENST00000381718 J3KRW8 73 aa12.14□□□□□ -0.47
NUP58-201ENST00000381718 CD5LO43866 347 aa12.14□□□□□ -0.47
NUP58-201ENST00000381718 NCR2O95944 276 aa12.14□□□□□ -0.47
NUP58-201ENST00000381718 ANXA2RQ3ZCQ2 193 aa12.14□□□□□ -0.47
NUP58-201ENST00000381718 Q6ZSV7 163 aa12.14□□□□□ -0.47
NUP58-201ENST00000381718 C18orf65Q6ZTR6 163 aa12.14□□□□□ -0.47
NUP58-201ENST00000381718 DEFB125Q8N687 156 aa12.14□□□□□ -0.47
NUP58-201ENST00000381718 A0A0J9YX75 114 aa12.14□□□□□ -0.47
NUP58-201ENST00000381718 LOC389332A0A1B0GUA5 103 aa12.14□□□□□ -0.47
NUP58-201ENST00000381718 SPATA45Q537H7 98 aa12.14□□□□□ -0.47
NUP58-201ENST00000381718 PET117Q6UWS5 81 aa12.14□□□□□ -0.47
NUP58-201ENST00000381718 ZNF747Q9BV97 191 aa12.14□□□□□ -0.47
NUP58-201ENST00000381718 MAP1LC3CQ9BXW4 147 aa12.14□□□□□ -0.47
NUP58-201ENST00000381718 TLN2Q9Y4G6 2542 aa12.13□□□□□ -0.47
NUP58-201ENST00000381718 AKAP9Q99996 3911 aa12.13□□□□□ -0.47
NUP58-201ENST00000381718 GAS8-AS1O95177 125 aa12.13□□□□□ -0.47
NUP58-201ENST00000381718 ZNF688P0C7X2 276 aa12.13□□□□□ -0.47
NUP58-201ENST00000381718 SPANXN1Q5VSR9 72 aa12.13□□□□□ -0.47
NUP58-201ENST00000381718 SMIM15Q7Z3B0 74 aa12.13□□□□□ -0.47
NUP58-201ENST00000381718 FLNAP21333 2647 aaKnown RBP12.13□□□□□ -0.47
NUP58-201ENST00000381718 CCDC168Q8NDH2 2452 aa12.13□□□□□ -0.47
NUP58-201ENST00000381718 C20orf202A1L168 122 aa12.13□□□□□ -0.47
NUP58-201ENST00000381718 PRSS47A8MTI9 375 aa12.13□□□□□ -0.47
NUP58-201ENST00000381718 LINC01619G3V211 115 aa12.13□□□□□ -0.47
NUP58-201ENST00000381718 ASIPP42127 132 aa12.13□□□□□ -0.47
NUP58-201ENST00000381718 LBHQ53QV2 105 aaPredicted RBP12.13□□□□□ -0.47
NUP58-201ENST00000381718 PSMG4Q5JS54 123 aa12.13□□□□□ -0.47
NUP58-201ENST00000381718 WFDC12Q8WWY7 111 aa12.13□□□□□ -0.47
NUP58-201ENST00000381718 TRAV9-2A0A087WT02 112 aa12.12□□□□□ -0.47
NUP58-201ENST00000381718 TNFRSF6BO95407 300 aa12.12□□□□□ -0.47
NUP58-201ENST00000381718 MAP1LC3AQ9H492 121 aa12.12□□□□□ -0.47
NUP58-201ENST00000381718 SLURP1P55000 103 aa12.12□□□□□ -0.47
NUP58-201ENST00000381718 DEFB136Q30KP8 78 aa12.12□□□□□ -0.47
NUP58-201ENST00000381718 ESM1Q9NQ30 184 aa12.12□□□□□ -0.47
NUP58-201ENST00000381718 RNASE3P12724 160 aaKnown RBP12.11□□□□□ -0.47
NUP58-201ENST00000381718 TFPI2P48307 235 aa12.11□□□□□ -0.47
NUP58-201ENST00000381718 ATOH7Q8N100 152 aa12.11□□□□□ -0.47
NUP58-201ENST00000381718 MYO9AB2RTY4 2548 aa12.11□□□□□ -0.47
NUP58-201ENST00000381718 IGLC3P0DOY3 106 aa12.11□□□□□ -0.47
NUP58-201ENST00000381718 MRPL52Q86TS9 123 aaKnown RBP12.11□□□□□ -0.47
NUP58-201ENST00000381718 OR11H1Q8NG94 326 aa12.11□□□□□ -0.47
NUP58-201ENST00000381718 NXT2Q9NPJ8 142 aaKnown RBP12.11□□□□□ -0.47
NUP58-201ENST00000381718 NXPH4O95158 308 aa12.1□□□□□ -0.47
NUP58-201ENST00000381718 LEPP41159 167 aa12.1□□□□□ -0.47
NUP58-201ENST00000381718 LINC01545Q5VT33 79 aa12.1□□□□□ -0.47
NUP58-201ENST00000381718 NRACQ8N912 160 aa12.1□□□□□ -0.47
NUP58-201ENST00000381718 OR4C46A6NHA9 309 aa12.1□□□□□ -0.47
NUP58-201ENST00000381718 S100A4P26447 101 aaKnown RBP12.1□□□□□ -0.47
NUP58-201ENST00000381718 ZNF705AQ6ZN79 300 aaPredicted RBP12.1□□□□□ -0.47
NUP58-201ENST00000381718 OR1N2Q8NGR9 330 aa12.1□□□□□ -0.47
NUP58-201ENST00000381718 IGLV2-18A0A075B6J9 118 aa12.09□□□□□ -0.47
NUP58-201ENST00000381718 TRAV2A0A0B4J234 112 aa12.09□□□□□ -0.47
NUP58-201ENST00000381718 GNRH2O43555 120 aa12.09□□□□□ -0.47
NUP58-201ENST00000381718 HBDP02042 147 aa12.09□□□□□ -0.47
NUP58-201ENST00000381718 MAJINQ3KP22 176 aa12.09□□□□□ -0.47
NUP58-201ENST00000381718 OR9G4Q8NGQ1 327 aa12.09□□□□□ -0.47
NUP58-201ENST00000381718 OR2K2Q8NGT1 345 aa12.09□□□□□ -0.47
NUP58-201ENST00000381718 MRAP2Q96G30 205 aa12.09□□□□□ -0.47
NUP58-201ENST00000381718 PEMTQ9UBM1 199 aa12.09□□□□□ -0.47
NUP58-201ENST00000381718 C7orf71A4D174 169 aa12.09□□□□□ -0.47
NUP58-201ENST00000381718 GATA1P15976 413 aaPredicted RBP12.09□□□□□ -0.47
NUP58-201ENST00000381718 FOXI2Q6ZQN5 318 aa12.09□□□□□ -0.47
NUP58-201ENST00000381718 C2orf88Q9BSF0 95 aa12.09□□□□□ -0.47
NUP58-201ENST00000381718 UNC79Q9P2D8 2635 aa12.09□□□□□ -0.47
NUP58-201ENST00000381718 PHLDA3Q9Y5J5 127 aa12.09□□□□□ -0.47
NUP58-201ENST00000381718 SONP18583 2426 aaKnown RBP12.08□□□□□ -0.48
NUP58-201ENST00000381718 UQCR10Q9UDW1 63 aa12.08□□□□□ -0.48
NUP58-201ENST00000381718 ITPR2Q14571 2701 aa12.08□□□□□ -0.48
NUP58-201ENST00000381718 DUSP14O95147 198 aaKnown RBP12.08□□□□□ -0.48
NUP58-201ENST00000381718 IGLL1P15814 213 aa12.08□□□□□ -0.48
NUP58-201ENST00000381718 DPF1Q92782 380 aa12.08□□□□□ -0.48
NUP58-201ENST00000381718 FAM159AQ6UWV7 190 aa12.07□□□□□ -0.48
NUP58-201ENST00000381718 Q8N8P6 123 aa12.07□□□□□ -0.48
NUP58-201ENST00000381718 SNHG12Q9BXW3 62 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms