RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 NUPR2A6NF83 97 aa13.88□□□□□ -0.19
GTF3A-201ENST00000381140 B4DEV8 164 aa13.88□□□□□ -0.19
GTF3A-201ENST00000381140 IGLV2-8P01709 118 aa13.88□□□□□ -0.19
GTF3A-201ENST00000381140 ADIRFQ15847 76 aa13.88□□□□□ -0.19
GTF3A-201ENST00000381140 CEMP1Q6PRD7 247 aaPredicted RBP13.88□□□□□ -0.19
GTF3A-201ENST00000381140 ATRAIDQ6UW56 229 aa13.88□□□□□ -0.19
GTF3A-201ENST00000381140 Q6ZTC4 211 aa13.88□□□□□ -0.19
GTF3A-201ENST00000381140 OCC1Q8TAD7 63 aa13.88□□□□□ -0.19
GTF3A-201ENST00000381140 PGPEP1LA6NFU8 196 aa13.87□□□□□ -0.19
GTF3A-201ENST00000381140 MLST8Q9BVC4 326 aa13.87□□□□□ -0.19
GTF3A-201ENST00000381140 DKK2Q9UBU2 259 aa13.87□□□□□ -0.19
GTF3A-201ENST00000381140 ZFP30Q9Y2G7 519 aa13.87□□□□□ -0.19
GTF3A-201ENST00000381140 TENM2Q9NT68 2774 aa13.87□□□□□ -0.19
GTF3A-201ENST00000381140 C12orf74Q32Q52 190 aa13.86□□□□□ -0.19
GTF3A-201ENST00000381140 Q6ZQT7 251 aa13.86□□□□□ -0.19
GTF3A-201ENST00000381140 ISOC2Q96AB3 205 aa13.86□□□□□ -0.19
GTF3A-201ENST00000381140 C16orf74Q96GX8 76 aa13.86□□□□□ -0.19
GTF3A-201ENST00000381140 PYGO2Q9BRQ0 406 aa13.86□□□□□ -0.19
GTF3A-201ENST00000381140 C7orf77A4D0Y5 90 aa13.85□□□□□ -0.19
GTF3A-201ENST00000381140 K7EN84 100 aa13.85□□□□□ -0.19
GTF3A-201ENST00000381140 GCGP01275 180 aa13.85□□□□□ -0.19
GTF3A-201ENST00000381140 PRNTQ86SH4 94 aa13.85□□□□□ -0.19
GTF3A-201ENST00000381140 TMEM183AQ8IXX5 376 aa13.85□□□□□ -0.19
GTF3A-201ENST00000381140 TMEM263Q8WUH6 116 aaKnown RBP13.85□□□□□ -0.19
GTF3A-201ENST00000381140 KLK5Q9Y337 293 aaPredicted RBP13.85□□□□□ -0.19
GTF3A-201ENST00000381140 STARD9Q9P2P6 4700 aa13.85□□□□□ -0.19
GTF3A-201ENST00000381140 A0A087WWC5 75 aa13.84□□□□□ -0.19
GTF3A-201ENST00000381140 TRBV7-9A0A0J9YWB2 115 aa13.84□□□□□ -0.19
GTF3A-201ENST00000381140 CBY3A6NI87 242 aa13.84□□□□□ -0.19
GTF3A-201ENST00000381140 ZNF324O75467 553 aaPredicted RBP13.84□□□□□ -0.19
GTF3A-201ENST00000381140 COX8CQ7Z4L0 72 aa13.84□□□□□ -0.19
GTF3A-201ENST00000381140 NDFIP1Q9BT67 221 aa13.84□□□□□ -0.19
GTF3A-201ENST00000381140 LENEPQ9Y5L5 61 aa13.84□□□□□ -0.19
GTF3A-201ENST00000381140 TEX48A0A1B0GUV7 120 aa13.83□□□□□ -0.19
GTF3A-201ENST00000381140 PLAC8L1A1L4L8 177 aa13.83□□□□□ -0.19
GTF3A-201ENST00000381140 MUC21Q5SSG8 566 aa13.83□□□□□ -0.19
GTF3A-201ENST00000381140 SAPCD1Q5SSQ6 148 aa13.83□□□□□ -0.19
GTF3A-201ENST00000381140 ZNF493Q6ZR52 646 aa13.83□□□□□ -0.19
GTF3A-201ENST00000381140 RNASE8Q8TDE3 154 aaKnown RBP13.83□□□□□ -0.19
GTF3A-201ENST00000381140 BIN3Q9NQY0 253 aa13.83□□□□□ -0.19
GTF3A-201ENST00000381140 TRAV10A0A0B4J240 114 aa13.83□□□□□ -0.2
GTF3A-201ENST00000381140 DEFB130BP0DP73 79 aa13.83□□□□□ -0.2
GTF3A-201ENST00000381140 DEFB130AP0DP74 79 aa13.83□□□□□ -0.2
GTF3A-201ENST00000381140 HTN3P15516 51 aa13.83□□□□□ -0.2
GTF3A-201ENST00000381140 DAD1P61803 113 aa13.83□□□□□ -0.2
GTF3A-201ENST00000381140 NHLRC2Q8NBF2 726 aa13.83□□□□□ -0.2
GTF3A-201ENST00000381140 NOP10Q9NPE3 64 aaKnown RBP13.83□□□□□ -0.2
GTF3A-201ENST00000381140 RPS10P5Q9NQ39 176 aa13.83□□□□□ -0.2
GTF3A-201ENST00000381140 NAGKQ9UJ70 344 aa13.83□□□□□ -0.2
GTF3A-201ENST00000381140 CSMD3Q7Z407 3707 aa13.82□□□□□ -0.2
GTF3A-201ENST00000381140 SNURFLB1AK76 121 aa13.82□□□□□ -0.2
GTF3A-201ENST00000381140 MT-ND4LP03901 98 aa13.82□□□□□ -0.2
GTF3A-201ENST00000381140 MGST1P10620 155 aaKnown RBP13.82□□□□□ -0.2
GTF3A-201ENST00000381140 RNF212Q495C1 297 aa13.82□□□□□ -0.2
GTF3A-201ENST00000381140 SFRP2Q96HF1 295 aa13.82□□□□□ -0.2
GTF3A-201ENST00000381140 C8orf49Q96NF6 230 aa13.82□□□□□ -0.2
GTF3A-201ENST00000381140 CTDSP1Q9GZU7 261 aa13.82□□□□□ -0.2
GTF3A-201ENST00000381140 TIMM8BQ9Y5J9 83 aaPredicted RBP13.82□□□□□ -0.2
GTF3A-201ENST00000381140 IGHV1OR15-1A0A075B7D0 117 aa13.81□□□□□ -0.2
GTF3A-201ENST00000381140 DEFB131BA0A096LNP1 70 aa13.81□□□□□ -0.2
GTF3A-201ENST00000381140 LYRM9A8MSI8 78 aa13.81□□□□□ -0.2
GTF3A-201ENST00000381140 OR5I1Q13606 314 aa13.81□□□□□ -0.2
GTF3A-201ENST00000381140 FAM231DQ6ZW35 169 aa13.81□□□□□ -0.2
GTF3A-201ENST00000381140 ANAPC16Q96DE5 110 aa13.81□□□□□ -0.2
GTF3A-201ENST00000381140 TMEM242Q9NWH2 141 aa13.81□□□□□ -0.2
GTF3A-201ENST00000381140 TP53TG3Q9ULZ0 132 aa13.81□□□□□ -0.2
GTF3A-201ENST00000381140 IGLL5B9A064 214 aa13.8□□□□□ -0.2
GTF3A-201ENST00000381140 PPP1R2P9O14990 202 aa13.8□□□□□ -0.2
GTF3A-201ENST00000381140 SCO1O75880 301 aa13.8□□□□□ -0.2
GTF3A-201ENST00000381140 OSTCQ9NRP0 149 aa13.8□□□□□ -0.2
GTF3A-201ENST00000381140 Q6AWC8 147 aa13.79□□□□□ -0.2
GTF3A-201ENST00000381140 OR10G8Q8NGN5 311 aa13.79□□□□□ -0.2
GTF3A-201ENST00000381140 ZC2HC1AQ96GY0 325 aa13.79□□□□□ -0.2
GTF3A-201ENST00000381140 LINC00467Q9BRT7 94 aa13.79□□□□□ -0.2
GTF3A-201ENST00000381140 GSN-AS1Q9NRJ2 163 aa13.79□□□□□ -0.2
GTF3A-201ENST00000381140 FAM159AQ6UWV7 190 aa13.78□□□□□ -0.2
GTF3A-201ENST00000381140 TRAV21A0A0B4J279 112 aa13.77□□□□□ -0.21
GTF3A-201ENST00000381140 C19orf71A6NCJ1 209 aa13.77□□□□□ -0.21
GTF3A-201ENST00000381140 ERVFC1-1P60608 527 aa13.77□□□□□ -0.21
GTF3A-201ENST00000381140 ANXA2RQ3ZCQ2 193 aa13.77□□□□□ -0.21
GTF3A-201ENST00000381140 SMUG1Q53HV7 270 aa13.77□□□□□ -0.21
GTF3A-201ENST00000381140 IBA57Q5T440 356 aaKnown RBP13.77□□□□□ -0.21
GTF3A-201ENST00000381140 C15orf54Q8N8G6 183 aa13.77□□□□□ -0.21
GTF3A-201ENST00000381140 SMCO4Q9NRQ5 59 aa13.77□□□□□ -0.21
GTF3A-201ENST00000381140 GAGE12BA1L429 117 aa13.76□□□□□ -0.21
GTF3A-201ENST00000381140 GAGE7O76087 117 aa13.76□□□□□ -0.21
GTF3A-201ENST00000381140 GAGE12FP0CL80 117 aa13.76□□□□□ -0.21
GTF3A-201ENST00000381140 GAGE12GP0CL81 117 aa13.76□□□□□ -0.21
GTF3A-201ENST00000381140 GAGE12IP0CL82 117 aa13.76□□□□□ -0.21
GTF3A-201ENST00000381140 ZNF80P51504 273 aaPredicted RBP13.76□□□□□ -0.21
GTF3A-201ENST00000381140 PRR27Q6MZM9 219 aa13.76□□□□□ -0.21
GTF3A-201ENST00000381140 C11orf72Q8NBR9 251 aa13.76□□□□□ -0.21
GTF3A-201ENST00000381140 RNASE7Q9H1E1 156 aaKnown RBP13.76□□□□□ -0.21
GTF3A-201ENST00000381140 V9GYV3 84 aa13.75□□□□□ -0.21
GTF3A-201ENST00000381140 CRIP1P50238 77 aa13.74□□□□□ -0.21
GTF3A-201ENST00000381140 ZNF415Q09FC8 603 aa13.74□□□□□ -0.21
GTF3A-201ENST00000381140 CBLN2Q8IUK8 224 aa13.74□□□□□ -0.21
GTF3A-201ENST00000381140 NUDT10Q8NFP7 164 aa13.74□□□□□ -0.21
GTF3A-201ENST00000381140 NUDT11Q96G61 164 aa13.74□□□□□ -0.21
GTF3A-201ENST00000381140 IGHV4-4A0A075B6R2 117 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms