RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 HLA-DMBP28068 263 aa14□□□□□ -0.17
CNTNAP3-204ENST00000377656 ZFAND6Q6FIF0 208 aa14□□□□□ -0.17
CNTNAP3-204ENST00000377656 EREGO14944 169 aa13.99□□□□□ -0.17
CNTNAP3-204ENST00000377656 VWC2Q2TAL6 325 aa13.99□□□□□ -0.17
CNTNAP3-204ENST00000377656 MRPL35Q9NZE8 188 aaKnown RBP13.99□□□□□ -0.17
CNTNAP3-204ENST00000377656 C20orf78Q9BR46 151 aa13.99□□□□□ -0.17
CNTNAP3-204ENST00000377656 LENEPQ9Y5L5 61 aa13.99□□□□□ -0.17
CNTNAP3-204ENST00000377656 F6UB75 175 aa13.99□□□□□ -0.17
CNTNAP3-204ENST00000377656 F8VRH5 84 aa13.99□□□□□ -0.17
CNTNAP3-204ENST00000377656 CDK2AP2O75956 126 aa13.99□□□□□ -0.17
CNTNAP3-204ENST00000377656 Q6ZWC4 215 aa13.99□□□□□ -0.17
CNTNAP3-204ENST00000377656 DYNAPQ8N1N2 210 aa13.99□□□□□ -0.17
CNTNAP3-204ENST00000377656 MRPL53Q96EL3 112 aaKnown RBP13.99□□□□□ -0.17
CNTNAP3-204ENST00000377656 IGLC2P0DOY2 106 aa13.98□□□□□ -0.17
CNTNAP3-204ENST00000377656 IGLC3P0DOY3 106 aa13.98□□□□□ -0.17
CNTNAP3-204ENST00000377656 KRTAP27-1Q3LI81 207 aa13.98□□□□□ -0.17
CNTNAP3-204ENST00000377656 NDUFA12Q9UI09 145 aa13.98□□□□□ -0.17
CNTNAP3-204ENST00000377656 COX11Q9Y6N1 276 aa13.98□□□□□ -0.17
CNTNAP3-204ENST00000377656 TSSC4Q9Y5U2 329 aaPredicted RBP13.97□□□□□ -0.17
CNTNAP3-204ENST00000377656 ASPHD1Q5U4P2 390 aa13.97□□□□□ -0.17
CNTNAP3-204ENST00000377656 IGHV7-81A0A0B4J1V7 117 aa13.96□□□□□ -0.17
CNTNAP3-204ENST00000377656 PIEZO1Q92508 2521 aa13.96□□□□□ -0.17
CNTNAP3-204ENST00000377656 IGHV4-30-2A0A087WSY4 118 aa13.96□□□□□ -0.18
CNTNAP3-204ENST00000377656 DEFB113Q30KQ7 82 aa13.96□□□□□ -0.18
CNTNAP3-204ENST00000377656 CCL24O00175 119 aa13.95□□□□□ -0.18
CNTNAP3-204ENST00000377656 IGLL1P15814 213 aa13.95□□□□□ -0.18
CNTNAP3-204ENST00000377656 FREM1Q5H8C1 2179 aa13.95□□□□□ -0.18
CNTNAP3-204ENST00000377656 EGR2P11161 476 aaPredicted RBP13.95□□□□□ -0.18
CNTNAP3-204ENST00000377656 ADAMTSL5Q6ZMM2 481 aa13.95□□□□□ -0.18
CNTNAP3-204ENST00000377656 RBAKDNA6NC62 111 aa13.95□□□□□ -0.18
CNTNAP3-204ENST00000377656 K7EN84 100 aa13.95□□□□□ -0.18
CNTNAP3-204ENST00000377656 NPBQ8NG41 125 aa13.95□□□□□ -0.18
CNTNAP3-204ENST00000377656 NXPH4O95158 308 aa13.94□□□□□ -0.18
CNTNAP3-204ENST00000377656 GAGE2AQ6NT46 116 aa13.94□□□□□ -0.18
CNTNAP3-204ENST00000377656 TRBV20-1A0A075B6N2 111 aa13.94□□□□□ -0.18
CNTNAP3-204ENST00000377656 COX8AP10176 69 aa13.94□□□□□ -0.18
CNTNAP3-204ENST00000377656 FOXE3Q13461 319 aa13.94□□□□□ -0.18
CNTNAP3-204ENST00000377656 ZNF106Q9H2Y7 1883 aaKnown RBP13.94□□□□□ -0.18
CNTNAP3-204ENST00000377656 GNRH2O43555 120 aa13.94□□□□□ -0.18
CNTNAP3-204ENST00000377656 IGHV4-38-2P0DP08 117 aa13.94□□□□□ -0.18
CNTNAP3-204ENST00000377656 IGF2BP2-AS1Q96M15 143 aa13.94□□□□□ -0.18
CNTNAP3-204ENST00000377656 SNHG12Q9BXW3 62 aa13.94□□□□□ -0.18
CNTNAP3-204ENST00000377656 PLA2G2EQ9NZK7 142 aa13.94□□□□□ -0.18
CNTNAP3-204ENST00000377656 IGKV1-17P01599 117 aa13.94□□□□□ -0.18
CNTNAP3-204ENST00000377656 K7EIM0 57 aa13.93□□□□□ -0.18
CNTNAP3-204ENST00000377656 SPRY4Q9C004 299 aa13.93□□□□□ -0.18
CNTNAP3-204ENST00000377656 DEFB136Q30KP8 78 aa13.93□□□□□ -0.18
CNTNAP3-204ENST00000377656 ZNF493Q6ZR52 646 aa13.93□□□□□ -0.18
CNTNAP3-204ENST00000377656 IGFBPL1Q8WX77 278 aa13.93□□□□□ -0.18
CNTNAP3-204ENST00000377656 ZNF48Q96MX3 618 aaPredicted RBP13.93□□□□□ -0.18
CNTNAP3-204ENST00000377656 COL4A4P53420 1690 aaPredicted RBP13.93□□□□□ -0.18
CNTNAP3-204ENST00000377656 BLCAPP62952 87 aa13.93□□□□□ -0.18
CNTNAP3-204ENST00000377656 NKAPP1Q8N9T2 125 aa13.93□□□□□ -0.18
CNTNAP3-204ENST00000377656 I3L2K1 104 aa13.93□□□□□ -0.18
CNTNAP3-204ENST00000377656 ANGP03950 147 aaKnown RBP13.93□□□□□ -0.18
CNTNAP3-204ENST00000377656 RHOHQ15669 191 aa13.93□□□□□ -0.18
CNTNAP3-204ENST00000377656 HERVK_113P63121 156 aa13.92□□□□□ -0.18
CNTNAP3-204ENST00000377656 IGLV11-55A0A075B6I3 123 aa13.92□□□□□ -0.18
CNTNAP3-204ENST00000377656 A0A096LPF7 62 aa13.92□□□□□ -0.18
CNTNAP3-204ENST00000377656 ADORA2A-AS1P86434 159 aa13.91□□□□□ -0.18
CNTNAP3-204ENST00000377656 J3QQQ9 107 aa13.91□□□□□ -0.18
CNTNAP3-204ENST00000377656 INAFM2P0DMQ5 153 aa13.91□□□□□ -0.18
CNTNAP3-204ENST00000377656 CFHR4Q92496 578 aa13.91□□□□□ -0.18
CNTNAP3-204ENST00000377656 U3KQE9 123 aa13.91□□□□□ -0.18
CNTNAP3-204ENST00000377656 A0A1W2PNU3 283 aaPredicted RBP13.91□□□□□ -0.18
CNTNAP3-204ENST00000377656 GTSF1LQ9H1H1 148 aa13.91□□□□□ -0.18
CNTNAP3-204ENST00000377656 C10orf105Q8TEF2 133 aa13.91□□□□□ -0.18
CNTNAP3-204ENST00000377656 NOP10Q9NPE3 64 aaKnown RBP13.91□□□□□ -0.18
CNTNAP3-204ENST00000377656 SEM1Q6ZVN7 128 aa13.9□□□□□ -0.18
CNTNAP3-204ENST00000377656 RMI2Q96E14 147 aa13.9□□□□□ -0.18
CNTNAP3-204ENST00000377656 AJUBAQ96IF1 538 aa13.9□□□□□ -0.18
CNTNAP3-204ENST00000377656 CTSGP08311 255 aa13.9□□□□□ -0.18
CNTNAP3-204ENST00000377656 KLF5Q13887 457 aaPredicted RBP13.9□□□□□ -0.18
CNTNAP3-204ENST00000377656 WIPF2Q8TF74 440 aaPredicted RBP13.89□□□□□ -0.19
CNTNAP3-204ENST00000377656 CHD3Q12873 2000 aaKnown RBP13.89□□□□□ -0.19
CNTNAP3-204ENST00000377656 SOCS3O14543 225 aa13.89□□□□□ -0.19
CNTNAP3-204ENST00000377656 CCDC168Q8NDH2 2452 aa13.89□□□□□ -0.19
CNTNAP3-204ENST00000377656 GP9P14770 177 aa13.89□□□□□ -0.19
CNTNAP3-204ENST00000377656 COA6Q5JTJ3 125 aaKnown RBP13.89□□□□□ -0.19
CNTNAP3-204ENST00000377656 SORL1Q92673 2214 aa13.89□□□□□ -0.19
CNTNAP3-204ENST00000377656 K7EMI3 77 aa13.89□□□□□ -0.19
CNTNAP3-204ENST00000377656 PRB1P04280 392 aa13.89□□□□□ -0.19
CNTNAP3-204ENST00000377656 C9orf118A6NHY6 69 aa13.88□□□□□ -0.19
CNTNAP3-204ENST00000377656 RITA1Q96K30 269 aa13.88□□□□□ -0.19
CNTNAP3-204ENST00000377656 PRSS29PA6NIE9 313 aa13.88□□□□□ -0.19
CNTNAP3-204ENST00000377656 FGF6P10767 208 aa13.88□□□□□ -0.19
CNTNAP3-204ENST00000377656 Q8N9W7 124 aa13.88□□□□□ -0.19
CNTNAP3-204ENST00000377656 TMEM126AQ9H061 195 aa13.88□□□□□ -0.19
CNTNAP3-204ENST00000377656 PRO1854Q9UHT4 67 aa13.88□□□□□ -0.19
CNTNAP3-204ENST00000377656 SLURP1P55000 103 aa13.87□□□□□ -0.19
CNTNAP3-204ENST00000377656 RNASE13Q5GAN3 156 aaKnown RBP13.87□□□□□ -0.19
CNTNAP3-204ENST00000377656 DKK2Q9UBU2 259 aa13.87□□□□□ -0.19
CNTNAP3-204ENST00000377656 ZNF747Q9BV97 191 aa13.87□□□□□ -0.19
CNTNAP3-204ENST00000377656 NACAE9PAV3 2078 aa13.87□□□□□ -0.19
CNTNAP3-204ENST00000377656 H3BMM0 161 aa13.86□□□□□ -0.19
CNTNAP3-204ENST00000377656 DAZAP2Q15038 168 aaPredicted RBP13.86□□□□□ -0.19
CNTNAP3-204ENST00000377656 MORN5Q5VZ52 161 aa13.86□□□□□ -0.19
CNTNAP3-204ENST00000377656 PATE2Q6UY27 113 aa13.86□□□□□ -0.19
CNTNAP3-204ENST00000377656 UBE2WQ96B02 151 aa13.86□□□□□ -0.19
CNTNAP3-204ENST00000377656 BUB3O43684 328 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms