RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 CADP27708 2225 aa15.38■□□□□ 0.05
LMO4-202ENST00000370544 F8VRH5 84 aa15.38■□□□□ 0.05
LMO4-202ENST00000370544 COX8AP10176 69 aa15.37■□□□□ 0.05
LMO4-202ENST00000370544 GP9P14770 177 aa15.37■□□□□ 0.05
LMO4-202ENST00000370544 GAGE2AQ6NT46 116 aa15.37■□□□□ 0.05
LMO4-202ENST00000370544 NOP10Q9NPE3 64 aaKnown RBP15.37■□□□□ 0.05
LMO4-202ENST00000370544 IGLL1P15814 213 aa15.37■□□□□ 0.05
LMO4-202ENST00000370544 SLURP1P55000 103 aa15.36■□□□□ 0.05
LMO4-202ENST00000370544 WIPF2Q8TF74 440 aaPredicted RBP15.36■□□□□ 0.05
LMO4-202ENST00000370544 DOPEY2Q9Y3R5 2298 aa15.36■□□□□ 0.05
LMO4-202ENST00000370544 BLCAPP62952 87 aa15.36■□□□□ 0.05
LMO4-202ENST00000370544 HERVK_113P63121 156 aa15.35■□□□□ 0.05
LMO4-202ENST00000370544 U3KQE9 123 aa15.35■□□□□ 0.05
LMO4-202ENST00000370544 RHOHQ15669 191 aa15.35■□□□□ 0.05
LMO4-202ENST00000370544 AJUBAQ96IF1 538 aa15.35■□□□□ 0.05
LMO4-202ENST00000370544 NKAPP1Q8N9T2 125 aa15.34■□□□□ 0.05
LMO4-202ENST00000370544 NXPH4O95158 308 aa15.34■□□□□ 0.05
LMO4-202ENST00000370544 ZNF493Q6ZR52 646 aa15.34■□□□□ 0.05
LMO4-202ENST00000370544 CTSGP08311 255 aa15.34■□□□□ 0.05
LMO4-202ENST00000370544 RNASE13Q5GAN3 156 aaKnown RBP15.34■□□□□ 0.05
LMO4-202ENST00000370544 SPTAN1Q13813 2472 aaKnown RBP15.34■□□□□ 0.05
LMO4-202ENST00000370544 IGKV1-17P01599 117 aa15.34■□□□□ 0.05
LMO4-202ENST00000370544 DAZAP2Q15038 168 aaPredicted RBP15.34■□□□□ 0.05
LMO4-202ENST00000370544 SPINK8P0C7L1 97 aa15.34■□□□□ 0.05
LMO4-202ENST00000370544 Q8N9W7 124 aa15.34■□□□□ 0.05
LMO4-202ENST00000370544 ANGP03950 147 aaKnown RBP15.33■□□□□ 0.05
LMO4-202ENST00000370544 C5orf56Q8N8D9 126 aa15.33■□□□□ 0.05
LMO4-202ENST00000370544 APRG1Q8IVJ8 170 aa15.33■□□□□ 0.04
LMO4-202ENST00000370544 NRGNQ92686 78 aa15.33■□□□□ 0.04
LMO4-202ENST00000370544 IGLV2-23P01705 113 aa15.33■□□□□ 0.04
LMO4-202ENST00000370544 ARFGEF3Q5TH69 2177 aa15.32■□□□□ 0.04
LMO4-202ENST00000370544 GTF3C1Q12789 2109 aa15.32■□□□□ 0.04
LMO4-202ENST00000370544 PATE2Q6UY27 113 aa15.32■□□□□ 0.04
LMO4-202ENST00000370544 SPAG8Q99932 426 aaPredicted RBP15.32■□□□□ 0.04
LMO4-202ENST00000370544 SNHG12Q9BXW3 62 aa15.32■□□□□ 0.04
LMO4-202ENST00000370544 KLF5Q13887 457 aaPredicted RBP15.32■□□□□ 0.04
LMO4-202ENST00000370544 MORN5Q5VZ52 161 aa15.32■□□□□ 0.04
LMO4-202ENST00000370544 DKK2Q9UBU2 259 aa15.32■□□□□ 0.04
LMO4-202ENST00000370544 C9orf118A6NHY6 69 aa15.31■□□□□ 0.04
LMO4-202ENST00000370544 J3QQQ9 107 aa15.31■□□□□ 0.04
LMO4-202ENST00000370544 RMI2Q96E14 147 aa15.31■□□□□ 0.04
LMO4-202ENST00000370544 MALRD1Q5VYJ5 2156 aa15.31■□□□□ 0.04
LMO4-202ENST00000370544 TRBV20-1A0A075B6N2 111 aa15.31■□□□□ 0.04
LMO4-202ENST00000370544 ZFP36P26651 326 aaKnown RBP15.31■□□□□ 0.04
LMO4-202ENST00000370544 CLPSL2Q6UWE3 100 aa15.31■□□□□ 0.04
LMO4-202ENST00000370544 C2orf16Q68DN1 1984 aa15.31■□□□□ 0.04
LMO4-202ENST00000370544 PCNX1Q96RV3 2341 aa15.3■□□□□ 0.04
LMO4-202ENST00000370544 COL4A3Q01955 1670 aa15.3■□□□□ 0.04
LMO4-202ENST00000370544 PRSS29PA6NIE9 313 aa15.3■□□□□ 0.04
LMO4-202ENST00000370544 C16orf54Q6UWD8 224 aa15.3■□□□□ 0.04
LMO4-202ENST00000370544 A0A0J9YY99 117 aa15.3■□□□□ 0.04
LMO4-202ENST00000370544 H3BMM0 161 aa15.3■□□□□ 0.04
LMO4-202ENST00000370544 SPRY2O43597 315 aa15.3■□□□□ 0.04
LMO4-202ENST00000370544 Q8N7P7 452 aa15.3■□□□□ 0.04
LMO4-202ENST00000370544 UBE2WQ96B02 151 aa15.3■□□□□ 0.04
LMO4-202ENST00000370544 DOCK11Q5JSL3 2073 aa15.29■□□□□ 0.04
LMO4-202ENST00000370544 WISP2O76076 250 aa15.29■□□□□ 0.04
LMO4-202ENST00000370544 ZNF48Q96MX3 618 aaPredicted RBP15.29■□□□□ 0.04
LMO4-202ENST00000370544 LTBP2Q14767 1821 aa15.29■□□□□ 0.04
LMO4-202ENST00000370544 CEND1Q8N111 149 aa15.29■□□□□ 0.04
LMO4-202ENST00000370544 K7EMI3 77 aa15.29■□□□□ 0.04
LMO4-202ENST00000370544 TEX22C9J3V5 150 aa15.28■□□□□ 0.04
LMO4-202ENST00000370544 C9orf66Q5T8R8 295 aa15.28■□□□□ 0.04
LMO4-202ENST00000370544 ODF3L1Q8IXM7 274 aa15.28■□□□□ 0.04
LMO4-202ENST00000370544 BUB3O43684 328 aa15.28■□□□□ 0.04
LMO4-202ENST00000370544 IGLV1-47P01700 117 aa15.28■□□□□ 0.04
LMO4-202ENST00000370544 GTSF1LQ9H1H1 148 aa15.28■□□□□ 0.04
LMO4-202ENST00000370544 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.28■□□□□ 0.04
LMO4-202ENST00000370544 IGKV2-29A2NJV5 120 aaPredicted RBP15.28■□□□□ 0.04
LMO4-202ENST00000370544 IGLV2-14P01704 120 aa15.28■□□□□ 0.04
LMO4-202ENST00000370544 ZMAT4Q9H898 229 aa15.28■□□□□ 0.04
LMO4-202ENST00000370544 FGF6P10767 208 aa15.27■□□□□ 0.04
LMO4-202ENST00000370544 ZNF747Q9BV97 191 aa15.27■□□□□ 0.04
LMO4-202ENST00000370544 SOCS3O14543 225 aa15.27■□□□□ 0.04
LMO4-202ENST00000370544 TAL2Q16559 108 aa15.27■□□□□ 0.03
LMO4-202ENST00000370544 MSMPQ1L6U9 139 aa15.27■□□□□ 0.03
LMO4-202ENST00000370544 WI2-2373I1.2A0A1W2PRP0 233 aa15.27■□□□□ 0.03
LMO4-202ENST00000370544 GATA1P15976 413 aaPredicted RBP15.26■□□□□ 0.03
LMO4-202ENST00000370544 BVES-AS1Q5T3Y7 98 aa15.26■□□□□ 0.03
LMO4-202ENST00000370544 RNF152Q8N8N0 203 aa15.26■□□□□ 0.03
LMO4-202ENST00000370544 Q8NA96 180 aa15.26■□□□□ 0.03
LMO4-202ENST00000370544 PRO1854Q9UHT4 67 aa15.26■□□□□ 0.03
LMO4-202ENST00000370544 PCNX2A6NKB5 2137 aa15.26■□□□□ 0.03
LMO4-202ENST00000370544 IGHV4OR15-8A0A075B7B6 117 aa15.26■□□□□ 0.03
LMO4-202ENST00000370544 A0A087WW49 117 aa15.26■□□□□ 0.03
LMO4-202ENST00000370544 INAFM2P0DMQ5 153 aa15.26■□□□□ 0.03
LMO4-202ENST00000370544 ZGRF1Q86YA3 2104 aa15.25■□□□□ 0.03
LMO4-202ENST00000370544 ABCA1O95477 2261 aa15.25■□□□□ 0.03
LMO4-202ENST00000370544 CRYGCP07315 174 aa15.25■□□□□ 0.03
LMO4-202ENST00000370544 FBXL19-AS1Q494R0 122 aa15.25■□□□□ 0.03
LMO4-202ENST00000370544 PLA2G2EQ9NZK7 142 aa15.25■□□□□ 0.03
LMO4-202ENST00000370544 SUMO4Q6EEV6 95 aa15.25■□□□□ 0.03
LMO4-202ENST00000370544 SCRT2Q9NQ03 307 aa15.25■□□□□ 0.03
LMO4-202ENST00000370544 XCL1P47992 114 aa15.24■□□□□ 0.03
LMO4-202ENST00000370544 MAJINQ3KP22 176 aa15.24■□□□□ 0.03
LMO4-202ENST00000370544 C16orf74Q96GX8 76 aa15.24■□□□□ 0.03
LMO4-202ENST00000370544 TRAV13-2A0A0B4J235 113 aa15.24■□□□□ 0.03
LMO4-202ENST00000370544 SIVA1O15304 175 aa15.24■□□□□ 0.03
LMO4-202ENST00000370544 MRAPQ8TCY5 172 aa15.24■□□□□ 0.03
LMO4-202ENST00000370544 FAM167A-AS1Q96KT0 104 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms