RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 V9GYQ6 96 aa0.11□□□□□ -2.39
RNU4-56P-201ENST00000364700 ARHGAP31Q2M1Z3 1444 aa0.11□□□□□ -2.39
RNU4-56P-201ENST00000364700 RBBP6Q7Z6E9 1792 aaKnown RBP0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 A0A096LNT2 108 aa0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 LOC107986453A0A1B0GWG9 222 aa0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 IFITM5A6NNB3 132 aa0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 C5orf58C9J3I9 102 aa0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 SULT1C4O75897 302 aa0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 EVI2AP22794 236 aa0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 SPINK7P58062 85 aa0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 C6orf52Q5T4I8 152 aa0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 SAMD13Q5VXD3 122 aa0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 LYPD5Q6UWN5 251 aa0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 OTOSQ8NHW6 89 aa0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 BRK1Q8WUW1 75 aa0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 MRPL36Q9P0J6 103 aaKnown RBP0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 JPT1Q9UK76 154 aa0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 MYH6P13533 1939 aa0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 AKAP11Q9UKA4 1901 aa0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 PTPRZ1P23471 2315 aaPredicted RBP0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 HRNRQ86YZ3 2850 aaPredicted RBP0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 MDN1Q9NU22 5596 aa0.1□□□□□ -2.39
RNU4-56P-201ENST00000364700 CHD9Q3L8U1 2897 aa0.09□□□□□ -2.39
RNU4-56P-201ENST00000364700 KIF13AQ9H1H9 1805 aa0.09□□□□□ -2.39
RNU4-56P-201ENST00000364700 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.09□□□□□ -2.4
RNU4-56P-201ENST00000364700 LOC107984156A0A0G2JMH3 177 aa0.09□□□□□ -2.4
RNU4-56P-201ENST00000364700 ARL5CA6NH57 179 aa0.09□□□□□ -2.4
RNU4-56P-201ENST00000364700 CDC42EP2O14613 210 aa0.09□□□□□ -2.4
RNU4-56P-201ENST00000364700 UQCRQO14949 82 aa0.09□□□□□ -2.4
RNU4-56P-201ENST00000364700 RHOHQ15669 191 aa0.09□□□□□ -2.4
RNU4-56P-201ENST00000364700 C3orf62Q6ZUJ4 267 aa0.09□□□□□ -2.4
RNU4-56P-201ENST00000364700 ARL17AQ8IVW1 177 aa0.09□□□□□ -2.4
RNU4-56P-201ENST00000364700 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.09□□□□□ -2.4
RNU4-56P-201ENST00000364700 OVOS2A0A0G2JMS6 1433 aa0.09□□□□□ -2.4
RNU4-56P-201ENST00000364700 ZCCHC6Q5VYS8 1495 aaKnown RBP0.09□□□□□ -2.4
RNU4-56P-201ENST00000364700 ZNF142P52746 1687 aaPredicted RBP0.08□□□□□ -2.4
RNU4-56P-201ENST00000364700 CXorf51AA0A1B0GTR3 108 aa0.08□□□□□ -2.4
RNU4-56P-201ENST00000364700 A0A1B0GW64 132 aa0.08□□□□□ -2.4
RNU4-56P-201ENST00000364700 A0A1B0GX51 115 aa0.08□□□□□ -2.4
RNU4-56P-201ENST00000364700 TMEM189A5PLL7 270 aa0.08□□□□□ -2.4
RNU4-56P-201ENST00000364700 H0YJX3 145 aa0.08□□□□□ -2.4
RNU4-56P-201ENST00000364700 PFDN1O60925 122 aa0.08□□□□□ -2.4
RNU4-56P-201ENST00000364700 IGKCP01834 107 aa0.08□□□□□ -2.4
RNU4-56P-201ENST00000364700 TCRAP04437 139 aa0.08□□□□□ -2.4
RNU4-56P-201ENST00000364700 GTF2A1P52655 376 aaPredicted RBP0.08□□□□□ -2.4
RNU4-56P-201ENST00000364700 SNRPD3P62318 126 aaKnown RBP0.08□□□□□ -2.4
RNU4-56P-201ENST00000364700 OR4S1Q8NGB4 309 aa0.08□□□□□ -2.4
RNU4-56P-201ENST00000364700 GINS2Q9Y248 185 aa0.08□□□□□ -2.4
RNU4-56P-201ENST00000364700 DNAJC15Q9Y5T4 150 aa0.08□□□□□ -2.4
RNU4-56P-201ENST00000364700 CADP27708 2225 aa0.07□□□□□ -2.4
RNU4-56P-201ENST00000364700 ASXL3Q9C0F0 2248 aa0.07□□□□□ -2.4
RNU4-56P-201ENST00000364700 DOCK11Q5JSL3 2073 aa0.07□□□□□ -2.4
RNU4-56P-201ENST00000364700 KDM5CP41229 1560 aa0.07□□□□□ -2.4
RNU4-56P-201ENST00000364700 MUC5ACP98088 5654 aa0.07□□□□□ -2.4
RNU4-56P-201ENST00000364700 AHNAKQ09666 5890 aaKnown RBP0.07□□□□□ -2.4
RNU4-56P-201ENST00000364700 TRAV36DV7A0A075B6V5 113 aa0.07□□□□□ -2.4
RNU4-56P-201ENST00000364700 TMEM30CPA0ZSE6 113 aa0.07□□□□□ -2.4
RNU4-56P-201ENST00000364700 EDF1O60869 148 aaKnown RBP0.07□□□□□ -2.4
RNU4-56P-201ENST00000364700 CD3DP04234 171 aa0.07□□□□□ -2.4
RNU4-56P-201ENST00000364700 SCTP09683 121 aa0.07□□□□□ -2.4
RNU4-56P-201ENST00000364700 SDC4P31431 198 aa0.07□□□□□ -2.4
RNU4-56P-201ENST00000364700 OR8B8Q15620 311 aa0.07□□□□□ -2.4
RNU4-56P-201ENST00000364700 ZNF56Q15929 161 aa0.07□□□□□ -2.4
RNU4-56P-201ENST00000364700 TMEM91Q6ZNR0 172 aa0.07□□□□□ -2.4
RNU4-56P-201ENST00000364700 TMEM35BQ8NCS4 154 aa0.07□□□□□ -2.4
RNU4-56P-201ENST00000364700 METTL1Q9UBP6 276 aaKnown RBP0.07□□□□□ -2.4
RNU4-56P-201ENST00000364700 BLMP54132 1417 aaPredicted RBP0.06□□□□□ -2.4
RNU4-56P-201ENST00000364700 CDK12Q9NYV4 1490 aaPredicted RBP0.06□□□□□ -2.4
RNU4-56P-201ENST00000364700 A0A0G2JMM0 328 aa0.06□□□□□ -2.4
RNU4-56P-201ENST00000364700 GNG14A0A1W2PPG7 69 aa0.06□□□□□ -2.4
RNU4-56P-201ENST00000364700 BBIP1A8MTZ0 92 aa0.06□□□□□ -2.4
RNU4-56P-201ENST00000364700 HIGD1CA8MV81 97 aa0.06□□□□□ -2.4
RNU4-56P-201ENST00000364700 J3KT08 172 aa0.06□□□□□ -2.4
RNU4-56P-201ENST00000364700 TNFSF15O95150 251 aa0.06□□□□□ -2.4
RNU4-56P-201ENST00000364700 ADCYAP1P18509 176 aa0.06□□□□□ -2.4
RNU4-56P-201ENST00000364700 ETV6P41212 452 aa0.06□□□□□ -2.4
RNU4-56P-201ENST00000364700 SPINK13Q1W4C9 94 aa0.06□□□□□ -2.4
RNU4-56P-201ENST00000364700 HSD17B12Q53GQ0 312 aa0.06□□□□□ -2.4
RNU4-56P-201ENST00000364700 SMIM15Q7Z3B0 74 aa0.06□□□□□ -2.4
RNU4-56P-201ENST00000364700 TAC4Q86UU9 113 aa0.06□□□□□ -2.4
RNU4-56P-201ENST00000364700 DMAC1Q96GE9 116 aa0.06□□□□□ -2.4
RNU4-56P-201ENST00000364700 PTPRMP28827 1452 aa0.05□□□□□ -2.4
RNU4-56P-201ENST00000364700 IGHV1-24A0A0C4DH33 117 aa0.05□□□□□ -2.4
RNU4-56P-201ENST00000364700 TPST1O60507 370 aa0.05□□□□□ -2.4
RNU4-56P-201ENST00000364700 MT-ND4LP03901 98 aa0.05□□□□□ -2.4
RNU4-56P-201ENST00000364700 S100GP29377 79 aa0.05□□□□□ -2.4
RNU4-56P-201ENST00000364700 TMEM244Q5VVB8 128 aa0.05□□□□□ -2.4
RNU4-56P-201ENST00000364700 OR8J3Q8NGG0 315 aa0.05□□□□□ -2.4
RNU4-56P-201ENST00000364700 AP1S3Q96PC3 154 aa0.05□□□□□ -2.4
RNU4-56P-201ENST00000364700 SELENOSQ9BQE4 189 aa0.05□□□□□ -2.4
RNU4-56P-201ENST00000364700 UBR5O95071 2799 aaPredicted RBP0.05□□□□□ -2.4
RNU4-56P-201ENST00000364700 NCOR2Q9Y618 2525 aa0.05□□□□□ -2.4
RNU4-56P-201ENST00000364700 UNC79Q9P2D8 2635 aa0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 COL7A1Q02388 2944 aa0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 MUC22E2RYF6 1773 aaPredicted RBP0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 PHIPQ8WWQ0 1821 aa0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 C9JAW5 83 aa0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 TSTD3H0UI37 97 aa0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 NEFHP12036 1026 aa0.04□□□□□ -2.4
RNU4-56P-201ENST00000364700 IL7P13232 177 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms