RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 MINOS1-NBL1R4GNA1 71 aa7.03□□□□□ -1.28
COL6A6-201ENST00000358511 TEX22C9J3V5 150 aa7.03□□□□□ -1.28
COL6A6-201ENST00000358511 NDPQ00604 133 aa7.03□□□□□ -1.28
COL6A6-201ENST00000358511 SDHAF1A6NFY7 115 aa7.03□□□□□ -1.28
COL6A6-201ENST00000358511 NUPR1O60356 82 aa7.03□□□□□ -1.28
COL6A6-201ENST00000358511 USMG5Q96IX5 58 aa7.03□□□□□ -1.28
COL6A6-201ENST00000358511 TMEM178BH3BS89 294 aa7.03□□□□□ -1.28
COL6A6-201ENST00000358511 CFC1BP0CG36 223 aa7.03□□□□□ -1.28
COL6A6-201ENST00000358511 CFC1P0CG37 223 aa7.03□□□□□ -1.28
COL6A6-201ENST00000358511 GAFA1Q96PS6 74 aa7.03□□□□□ -1.28
COL6A6-201ENST00000358511 VMO1Q7Z5L0 202 aa7.02□□□□□ -1.28
COL6A6-201ENST00000358511 WFDC2Q14508 124 aa7.02□□□□□ -1.29
COL6A6-201ENST00000358511 LINC01560Q8TB33 94 aa7.02□□□□□ -1.29
COL6A6-201ENST00000358511 ATP5G1P05496 136 aa7.02□□□□□ -1.29
COL6A6-201ENST00000358511 WIPF3A6NGB9 483 aa7.02□□□□□ -1.29
COL6A6-201ENST00000358511 TRGV1A0A0A0MS02 117 aa7.02□□□□□ -1.29
COL6A6-201ENST00000358511 MLANAQ16655 118 aa7.02□□□□□ -1.29
COL6A6-201ENST00000358511 CRLF1O75462 422 aa7.01□□□□□ -1.29
COL6A6-201ENST00000358511 ZNF833PQ6ZTB9 187 aa7.01□□□□□ -1.29
COL6A6-201ENST00000358511 ZMAT4Q9H898 229 aa7.01□□□□□ -1.29
COL6A6-201ENST00000358511 THSD7BQ9C0I4 1608 aa7.01□□□□□ -1.29
COL6A6-201ENST00000358511 EFNA4P52798 201 aa7.01□□□□□ -1.29
COL6A6-201ENST00000358511 CR1LQ2VPA4 569 aa7.01□□□□□ -1.29
COL6A6-201ENST00000358511 IGHG3P01860 377 aa7.01□□□□□ -1.29
COL6A6-201ENST00000358511 C7orf69Q9H7B7 122 aa7.01□□□□□ -1.29
COL6A6-201ENST00000358511 DAZ1Q9NQZ3 744 aaKnown RBP7.01□□□□□ -1.29
COL6A6-201ENST00000358511 PRSS47A8MTI9 375 aa7.01□□□□□ -1.29
COL6A6-201ENST00000358511 M0R1W7 72 aa7.01□□□□□ -1.29
COL6A6-201ENST00000358511 ZNF883P0CG24 379 aa7.01□□□□□ -1.29
COL6A6-201ENST00000358511 FXYD2P54710 66 aa7.01□□□□□ -1.29
COL6A6-201ENST00000358511 RHODO00212 210 aa7.01□□□□□ -1.29
COL6A6-201ENST00000358511 C14orf132Q9NPU4 83 aa7.01□□□□□ -1.29
COL6A6-201ENST00000358511 PRR19A6NJB7 356 aa7.01□□□□□ -1.29
COL6A6-201ENST00000358511 H3BRN7 92 aa7.01□□□□□ -1.29
COL6A6-201ENST00000358511 NDUFV3P56181 108 aaKnown RBP7.01□□□□□ -1.29
COL6A6-201ENST00000358511 GATA4P43694 442 aa7□□□□□ -1.29
COL6A6-201ENST00000358511 ASPHD1Q5U4P2 390 aa7□□□□□ -1.29
COL6A6-201ENST00000358511 HAMPP81172 84 aa7□□□□□ -1.29
COL6A6-201ENST00000358511 SS18Q15532 418 aa7□□□□□ -1.29
COL6A6-201ENST00000358511 Q6ZUT4 128 aa7□□□□□ -1.29
COL6A6-201ENST00000358511 TIMM17AQ99595 171 aa7□□□□□ -1.29
COL6A6-201ENST00000358511 IGHV3-53P01767 116 aa7□□□□□ -1.29
COL6A6-201ENST00000358511 KNCNA6PVL3 124 aa7□□□□□ -1.29
COL6A6-201ENST00000358511 IGFL4Q6B9Z1 124 aa7□□□□□ -1.29
COL6A6-201ENST00000358511 PINLYPA6NC86 204 aa7□□□□□ -1.29
COL6A6-201ENST00000358511 RNASE6Q93091 150 aaKnown RBP7□□□□□ -1.29
COL6A6-201ENST00000358511 K7ERS5 55 aa7□□□□□ -1.29
COL6A6-201ENST00000358511 TTC28Q96AY4 2481 aa7□□□□□ -1.29
COL6A6-201ENST00000358511 A0A1B0GX51 115 aa6.99□□□□□ -1.29
COL6A6-201ENST00000358511 GNLYP22749 145 aa6.99□□□□□ -1.29
COL6A6-201ENST00000358511 RHOHQ15669 191 aa6.99□□□□□ -1.29
COL6A6-201ENST00000358511 FAM120AOSQ5T036 256 aa6.99□□□□□ -1.29
COL6A6-201ENST00000358511 ICOSQ9Y6W8 199 aa6.99□□□□□ -1.29
COL6A6-201ENST00000358511 TRAV12-1A0A0B4J245 112 aa6.99□□□□□ -1.29
COL6A6-201ENST00000358511 PRR20EP86478 221 aa6.99□□□□□ -1.29
COL6A6-201ENST00000358511 PRR20CP86479 221 aa6.99□□□□□ -1.29
COL6A6-201ENST00000358511 PRR20DP86480 221 aa6.99□□□□□ -1.29
COL6A6-201ENST00000358511 PRR20BP86481 221 aa6.99□□□□□ -1.29
COL6A6-201ENST00000358511 PRR20AP86496 221 aa6.99□□□□□ -1.29
COL6A6-201ENST00000358511 ZNF462Q96JM2 2506 aa6.99□□□□□ -1.29
COL6A6-201ENST00000358511 HERVK_113P63121 156 aa6.99□□□□□ -1.29
COL6A6-201ENST00000358511 ETV2O00321 342 aaPredicted RBP6.99□□□□□ -1.29
COL6A6-201ENST00000358511 RBX1P62877 108 aa6.99□□□□□ -1.29
COL6A6-201ENST00000358511 SPATA25Q9BR10 227 aa6.99□□□□□ -1.29
COL6A6-201ENST00000358511 PRDM6Q9NQX0 595 aa6.99□□□□□ -1.29
COL6A6-201ENST00000358511 IGLV3-1P01715 115 aa6.99□□□□□ -1.29
COL6A6-201ENST00000358511 BAALC-AS2P0C853 105 aa6.98□□□□□ -1.29
COL6A6-201ENST00000358511 WFDC9Q8NEX5 89 aa6.98□□□□□ -1.29
COL6A6-201ENST00000358511 IGF2BP2-AS1Q96M15 143 aa6.98□□□□□ -1.29
COL6A6-201ENST00000358511 WT1-ASQ06250 92 aa6.98□□□□□ -1.29
COL6A6-201ENST00000358511 DEFB105AQ8NG35 78 aa6.98□□□□□ -1.29
COL6A6-201ENST00000358511 PLA2G2EQ9NZK7 142 aa6.98□□□□□ -1.29
COL6A6-201ENST00000358511 VWCEQ96DN2 955 aa6.98□□□□□ -1.29
COL6A6-201ENST00000358511 K7EM74 188 aa6.98□□□□□ -1.29
COL6A6-201ENST00000358511 NBL1P41271 181 aa6.98□□□□□ -1.29
COL6A6-201ENST00000358511 B3GALT5-AS1P59052 145 aa6.98□□□□□ -1.29
COL6A6-201ENST00000358511 F5H768 121 aa6.98□□□□□ -1.29
COL6A6-201ENST00000358511 LINC00527Q9UJ94 153 aa6.98□□□□□ -1.29
COL6A6-201ENST00000358511 DKK1O94907 266 aa6.97□□□□□ -1.29
COL6A6-201ENST00000358511 CFHR4Q92496 578 aa6.97□□□□□ -1.29
COL6A6-201ENST00000358511 ORMDL1Q9P0S3 153 aa6.97□□□□□ -1.29
COL6A6-201ENST00000358511 A0A0B4J2C4 111 aa6.97□□□□□ -1.29
COL6A6-201ENST00000358511 RBAKDNA6NC62 111 aa6.97□□□□□ -1.29
COL6A6-201ENST00000358511 Q8NFD4 153 aa6.97□□□□□ -1.29
COL6A6-201ENST00000358511 PRSS22Q9GZN4 317 aa6.97□□□□□ -1.29
COL6A6-201ENST00000358511 CCDC168Q8NDH2 2452 aa6.97□□□□□ -1.29
COL6A6-201ENST00000358511 CFHR1Q03591 330 aa6.97□□□□□ -1.29
COL6A6-201ENST00000358511 BRK1Q8WUW1 75 aa6.97□□□□□ -1.29
COL6A6-201ENST00000358511 MRPL23Q16540 153 aaKnown RBP6.97□□□□□ -1.29
COL6A6-201ENST00000358511 LINC00173Q6ZV60 143 aa6.97□□□□□ -1.29
COL6A6-201ENST00000358511 TMEM219Q86XT9 240 aa6.97□□□□□ -1.29
COL6A6-201ENST00000358511 IGFBPL1Q8WX77 278 aa6.97□□□□□ -1.29
COL6A6-201ENST00000358511 C15orf65H3BRN8 121 aa6.97□□□□□ -1.29
COL6A6-201ENST00000358511 IGHG2P01859 326 aa6.97□□□□□ -1.29
COL6A6-201ENST00000358511 DEFB130BP0DP73 79 aa6.96□□□□□ -1.29
COL6A6-201ENST00000358511 DEFB130AP0DP74 79 aa6.96□□□□□ -1.29
COL6A6-201ENST00000358511 CMC4P56277 68 aaPredicted RBP6.96□□□□□ -1.29
COL6A6-201ENST00000358511 EPOPA6NHQ4 379 aa6.96□□□□□ -1.29
COL6A6-201ENST00000358511 PRR4Q16378 134 aa6.96□□□□□ -1.3
COL6A6-201ENST00000358511 RHPN1-AS1Q9BWJ2 59 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms