RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 DKK2Q9UBU2 259 aa2.84□□□□□ -1.96
CNOT4-202ENST00000356162 PSG8Q9UQ74 426 aa2.84□□□□□ -1.96
CNOT4-202ENST00000356162 KLK5Q9Y337 293 aaPredicted RBP2.84□□□□□ -1.96
CNOT4-202ENST00000356162 TRGV11A0A075B6L2 103 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 IGHV1OR15-1A0A075B7D0 117 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 TRAV8-1A0A0A6YYK1 113 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 TRAV21A0A0B4J279 112 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 PLAC8L1A1L4L8 177 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 PAGE4O60829 102 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 ZNF324O75467 553 aaPredicted RBP2.83□□□□□ -1.96
CNOT4-202ENST00000356162 IGLV2-11P01706 119 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 S100A9P06702 114 aaKnown RBP2.83□□□□□ -1.96
CNOT4-202ENST00000356162 RNASE4P34096 147 aaKnown RBP2.83□□□□□ -1.96
CNOT4-202ENST00000356162 ATP5G3P48201 142 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 NKX2-5P52952 324 aaPredicted RBP2.83□□□□□ -1.96
CNOT4-202ENST00000356162 BLOC1S1P78537 153 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 ZNF415Q09FC8 603 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 C12orf74Q32Q52 190 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 SMUG1Q53HV7 270 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 SAPCD1Q5SSQ6 148 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 IBA57Q5T440 356 aaKnown RBP2.83□□□□□ -1.96
CNOT4-202ENST00000356162 FAM222AQ5U5X8 452 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 CST9LP1Q5W188 147 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 PHLDA1Q8WV24 401 aaPredicted RBP2.83□□□□□ -1.96
CNOT4-202ENST00000356162 C11orf52Q96A22 123 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 FMC1Q96HJ9 113 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 TREM1Q9NP99 234 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 TENM3Q9P273 2699 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 COL7A1Q02388 2944 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 A0A1B0GV50 99 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 SNURFLB1AK76 121 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 AZU1P20160 251 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 EMP1P54849 157 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 TCL1AP56279 114 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 TCTAP57738 103 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 DAD1P61803 113 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 UBE2G1P62253 170 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 Q6ZTC4 211 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 COX8CQ7Z4L0 72 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 PRNTQ86SH4 94 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 LINC00612Q8N6U2 182 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 TVP23CQ96ET8 276 aa2.83□□□□□ -1.96
CNOT4-202ENST00000356162 TIMM8BQ9Y5J9 83 aaPredicted RBP2.83□□□□□ -1.96
CNOT4-202ENST00000356162 CBY3A6NI87 242 aa2.82□□□□□ -1.96
CNOT4-202ENST00000356162 BCL2P10415 239 aa2.82□□□□□ -1.96
CNOT4-202ENST00000356162 DAZ2Q13117 558 aaKnown RBP2.82□□□□□ -1.96
CNOT4-202ENST00000356162 PLECQ15149 4684 aaKnown RBP2.82□□□□□ -1.96
CNOT4-202ENST00000356162 TMEM183BQ1AE95 376 aa2.82□□□□□ -1.96
CNOT4-202ENST00000356162 TDRG1Q3Y452 100 aa2.82□□□□□ -1.96
CNOT4-202ENST00000356162 ALKAL2Q6UX46 152 aa2.82□□□□□ -1.96
CNOT4-202ENST00000356162 C11orf72Q8NBR9 251 aa2.82□□□□□ -1.96
CNOT4-202ENST00000356162 C2CD4CQ8TF44 421 aa2.82□□□□□ -1.96
CNOT4-202ENST00000356162 FAM210BQ96KR6 192 aa2.82□□□□□ -1.96
CNOT4-202ENST00000356162 SDF2L1Q9HCN8 221 aa2.82□□□□□ -1.96
CNOT4-202ENST00000356162 GNG13Q9P2W3 67 aa2.82□□□□□ -1.96
CNOT4-202ENST00000356162 TP53TG3Q9ULZ0 132 aa2.82□□□□□ -1.96
CNOT4-202ENST00000356162 ZFP30Q9Y2G7 519 aa2.82□□□□□ -1.96
CNOT4-202ENST00000356162 KLF12Q9Y4X4 402 aa2.82□□□□□ -1.96
CNOT4-202ENST00000356162 TRAV34A0A0B4J273 112 aa2.82□□□□□ -1.96
CNOT4-202ENST00000356162 NDUFS6O75380 124 aaKnown RBP2.82□□□□□ -1.96
CNOT4-202ENST00000356162 GCGP01275 180 aa2.82□□□□□ -1.96
CNOT4-202ENST00000356162 LTAP01374 205 aa2.82□□□□□ -1.96
CNOT4-202ENST00000356162 PFN1P07737 140 aaKnown RBP2.82□□□□□ -1.96
CNOT4-202ENST00000356162 FAM159AQ6UWV7 190 aa2.82□□□□□ -1.96
CNOT4-202ENST00000356162 KCNS1Q96KK3 526 aa2.82□□□□□ -1.96
CNOT4-202ENST00000356162 DEFB131BA0A096LNP1 70 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 PDE6DO43924 150 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 SPINK4O60575 86 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 PRM2P04554 102 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 TYMSP04818 313 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 HTN1P15515 57 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 CCL20P78556 96 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 MEF2BQ02080 365 aaPredicted RBP2.81□□□□□ -1.96
CNOT4-202ENST00000356162 MUC21Q5SSG8 566 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 ZNF767PQ75MW2 155 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 LYPD6BQ8NI32 183 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 SGK494Q96LW2 274 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 C18orf15Q96N68 181 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 SPXQ9BT56 116 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 NOP10Q9NPE3 64 aaKnown RBP2.81□□□□□ -1.96
CNOT4-202ENST00000356162 VAX2Q9UIW0 290 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 NAGKQ9UJ70 344 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 TGP01266 2768 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 STAB2Q8WWQ8 2551 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 IGHV3-16A0A0C4DH30 117 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 LCE6AA0A183 80 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 ATP5G1P05496 136 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 CXCL1P09341 107 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 ZNF80P51504 273 aaPredicted RBP2.81□□□□□ -1.96
CNOT4-202ENST00000356162 LGALS9BQ3B8N2 356 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 ZNF506Q5JVG8 444 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 FAM162BQ5T6X4 162 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 TMEM183AQ8IXX5 376 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 SMIM12Q96EX1 92 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 ZC2HC1AQ96GY0 325 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 LINC00479Q96M42 142 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 NDUFAF3Q9BU61 184 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 GSN-AS1Q9NRJ2 163 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 SACSQ9NZJ4 4579 aa2.81□□□□□ -1.96
CNOT4-202ENST00000356162 IGHV4-4A0A075B6R2 117 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms