RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 CARD19Q96LW7 228 aa7.32□□□□□ -1.24
SMG6-202ENST00000354901 DPM2O94777 84 aa7.32□□□□□ -1.24
SMG6-202ENST00000354901 NHLRC4P0CG21 123 aaPredicted RBP7.32□□□□□ -1.24
SMG6-202ENST00000354901 ANKRD29Q8N6D5 301 aa7.32□□□□□ -1.24
SMG6-202ENST00000354901 BEX4Q9NWD9 120 aaPredicted RBP7.32□□□□□ -1.24
SMG6-202ENST00000354901 C19orf71A6NCJ1 209 aa7.32□□□□□ -1.24
SMG6-202ENST00000354901 NCBP2LA6PVI3 153 aaKnown RBP7.32□□□□□ -1.24
SMG6-202ENST00000354901 FMC1Q96HJ9 113 aa7.32□□□□□ -1.24
SMG6-202ENST00000354901 VKORC1Q9BQB6 163 aa7.32□□□□□ -1.24
SMG6-202ENST00000354901 PRSS22Q9GZN4 317 aa7.32□□□□□ -1.24
SMG6-202ENST00000354901 A8MWV9 139 aa7.31□□□□□ -1.24
SMG6-202ENST00000354901 IGKV1-17P01599 117 aa7.31□□□□□ -1.24
SMG6-202ENST00000354901 ZNF688P0C7X2 276 aa7.31□□□□□ -1.24
SMG6-202ENST00000354901 KLRB1Q12918 225 aa7.31□□□□□ -1.24
SMG6-202ENST00000354901 ZNF672Q499Z4 452 aaPredicted RBP7.31□□□□□ -1.24
SMG6-202ENST00000354901 TMEM158Q8WZ71 300 aa7.31□□□□□ -1.24
SMG6-202ENST00000354901 MLST8Q9BVC4 326 aa7.31□□□□□ -1.24
SMG6-202ENST00000354901 CFAP126Q5VTH2 177 aa7.31□□□□□ -1.24
SMG6-202ENST00000354901 C8orf49Q96NF6 230 aa7.31□□□□□ -1.24
SMG6-202ENST00000354901 ZNF492Q9P255 531 aa7.31□□□□□ -1.24
SMG6-202ENST00000354901 CRYGBP07316 175 aa7.31□□□□□ -1.24
SMG6-202ENST00000354901 MFAP4P55083 255 aa7.31□□□□□ -1.24
SMG6-202ENST00000354901 C8orf31Q8N9H6 132 aa7.31□□□□□ -1.24
SMG6-202ENST00000354901 MSRB1Q9NZV6 116 aa7.31□□□□□ -1.24
SMG6-202ENST00000354901 HIVEP3Q5T1R4 2406 aa7.3□□□□□ -1.24
SMG6-202ENST00000354901 WI2-2373I1.2A0A1W2PRP0 233 aa7.3□□□□□ -1.24
SMG6-202ENST00000354901 EFNA4P52798 201 aa7.3□□□□□ -1.24
SMG6-202ENST00000354901 KLF12Q9Y4X4 402 aa7.3□□□□□ -1.24
SMG6-202ENST00000354901 COL12A1Q99715 3063 aa7.3□□□□□ -1.24
SMG6-202ENST00000354901 I3L2K1 104 aa7.3□□□□□ -1.24
SMG6-202ENST00000354901 CDSNQ15517 529 aa7.3□□□□□ -1.24
SMG6-202ENST00000354901 C9JAW5 83 aa7.29□□□□□ -1.24
SMG6-202ENST00000354901 IGFL4Q6B9Z1 124 aa7.29□□□□□ -1.24
SMG6-202ENST00000354901 TMEM75Q8N9X5 138 aa7.29□□□□□ -1.24
SMG6-202ENST00000354901 AAMDCQ9H7C9 122 aa7.29□□□□□ -1.24
SMG6-202ENST00000354901 K7EIM0 57 aa7.29□□□□□ -1.24
SMG6-202ENST00000354901 CCL21O00585 134 aa7.29□□□□□ -1.24
SMG6-202ENST00000354901 FAM104BQ5XKR9 115 aa7.29□□□□□ -1.24
SMG6-202ENST00000354901 TEN1Q86WV5 123 aa7.29□□□□□ -1.24
SMG6-202ENST00000354901 HRNRQ86YZ3 2850 aaPredicted RBP7.29□□□□□ -1.24
SMG6-202ENST00000354901 LOC107984640A0A0U1RRK4 108 aa7.29□□□□□ -1.24
SMG6-202ENST00000354901 CT83Q5H943 113 aa7.29□□□□□ -1.24
SMG6-202ENST00000354901 MORN3Q6PF18 240 aaPredicted RBP7.29□□□□□ -1.24
SMG6-202ENST00000354901 OTORQ9NRC9 128 aa7.29□□□□□ -1.24
SMG6-202ENST00000354901 HHLA3Q9XRX5 114 aa7.29□□□□□ -1.24
SMG6-202ENST00000354901 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.28□□□□□ -1.243e-6■■■□□ 15.7
SMG6-202ENST00000354901 Q1RN00 199 aa7.28□□□□□ -1.24
SMG6-202ENST00000354901 RNF125Q96EQ8 232 aa7.28□□□□□ -1.24
SMG6-202ENST00000354901 GFRA4Q9GZZ7 299 aa7.28□□□□□ -1.24
SMG6-202ENST00000354901 HIGD1BQ9P298 99 aa7.28□□□□□ -1.24
SMG6-202ENST00000354901 RAXQ9Y2V3 346 aa7.28□□□□□ -1.24
SMG6-202ENST00000354901 C10orf126Q8N4M7 172 aa7.28□□□□□ -1.24
SMG6-202ENST00000354901 CSDC2Q9Y534 153 aaKnown RBP7.28□□□□□ -1.24
SMG6-202ENST00000354901 NBR2O15453 112 aa7.28□□□□□ -1.24
SMG6-202ENST00000354901 TCL1BO95988 128 aa7.28□□□□□ -1.24
SMG6-202ENST00000354901 IGLV2-11P01706 119 aa7.28□□□□□ -1.24
SMG6-202ENST00000354901 ORM1P02763 201 aa7.28□□□□□ -1.24
SMG6-202ENST00000354901 FBXL19-AS1Q494R0 122 aa7.28□□□□□ -1.24
SMG6-202ENST00000354901 Q8TAT8 98 aa7.28□□□□□ -1.24
SMG6-202ENST00000354901 CHCHD5Q9BSY4 110 aa7.28□□□□□ -1.24
SMG6-202ENST00000354901 DPM3Q9P2X0 92 aa7.28□□□□□ -1.24
SMG6-202ENST00000354901 TRBV19A0A075B6N1 114 aa7.27□□□□□ -1.25
SMG6-202ENST00000354901 RPL7P18124 248 aaKnown RBP7.27□□□□□ -1.25
SMG6-202ENST00000354901 ZNF491Q8N8L2 437 aa7.27□□□□□ -1.25
SMG6-202ENST00000354901 MYOZ3Q8TDC0 251 aa7.27□□□□□ -1.25
SMG6-202ENST00000354901 ZNF815PA8K554 130 aa7.27□□□□□ -1.25
SMG6-202ENST00000354901 TMEM262E9PQX1 116 aa7.27□□□□□ -1.25
SMG6-202ENST00000354901 IGHV4-39P01824 125 aa7.27□□□□□ -1.25
SMG6-202ENST00000354901 C15orf53Q8NAA6 179 aa7.27□□□□□ -1.25
SMG6-202ENST00000354901 CITED2Q99967 270 aaPredicted RBP7.27□□□□□ -1.25
SMG6-202ENST00000354901 IGKV2-40A0A087WW87 121 aaPredicted RBP7.26□□□□□ -1.25
SMG6-202ENST00000354901 TRAV26-2A0A0B4J265 109 aa7.26□□□□□ -1.25
SMG6-202ENST00000354901 IGKV2D-40P01614 121 aaPredicted RBP7.26□□□□□ -1.25
SMG6-202ENST00000354901 NTN5Q8WTR8 489 aaPredicted RBP7.26□□□□□ -1.25
SMG6-202ENST00000354901 SHANK2-AS3Q9BTD1 123 aa7.26□□□□□ -1.25
SMG6-202ENST00000354901 IGHV3OR16-13A0A075B7E8 117 aa7.26□□□□□ -1.25
SMG6-202ENST00000354901 IGHV3-74A0A0B4J1X5 117 aa7.26□□□□□ -1.25
SMG6-202ENST00000354901 ZNF785A8K8V0 405 aa7.26□□□□□ -1.25
SMG6-202ENST00000354901 TRPT1Q86TN4 253 aaKnown RBP7.26□□□□□ -1.25
SMG6-202ENST00000354901 NDPQ00604 133 aa7.26□□□□□ -1.25
SMG6-202ENST00000354901 SIGLEC15Q6ZMC9 328 aa7.26□□□□□ -1.25
SMG6-202ENST00000354901 KLHL30-AS1Q8NEE0 82 aa7.26□□□□□ -1.25
SMG6-202ENST00000354901 TRAV25A0A0B4J276 109 aa7.25□□□□□ -1.25
SMG6-202ENST00000354901 HLA-DMBP28068 263 aa7.25□□□□□ -1.25
SMG6-202ENST00000354901 DYNAPQ8N1N2 210 aa7.25□□□□□ -1.25
SMG6-202ENST00000354901 H3BRN7 92 aa7.25□□□□□ -1.25
SMG6-202ENST00000354901 RHODO00212 210 aa7.25□□□□□ -1.25
SMG6-202ENST00000354901 CRIP1P50238 77 aa7.25□□□□□ -1.25
SMG6-202ENST00000354901 TMEM78Q5T7P6 136 aa7.25□□□□□ -1.25
SMG6-202ENST00000354901 PVRIGQ6DKI7 326 aa7.25□□□□□ -1.25
SMG6-202ENST00000354901 TIMD4Q96H15 378 aa7.25□□□□□ -1.25
SMG6-202ENST00000354901 IGHV3-66A0A0C4DH42 116 aa7.25□□□□□ -1.25
SMG6-202ENST00000354901 SMIM9A6NGZ8 99 aa7.25□□□□□ -1.25
SMG6-202ENST00000354901 LY6LH3BQJ8 138 aa7.25□□□□□ -1.25
SMG6-202ENST00000354901 LINC00694P0DN24 101 aa7.25□□□□□ -1.25
SMG6-202ENST00000354901 CRIP2P52943 208 aaPredicted RBP7.25□□□□□ -1.25
SMG6-202ENST00000354901 EDA2RQ9HAV5 297 aa7.25□□□□□ -1.25
SMG6-202ENST00000354901 A0A087WX48 190 aa7.24□□□□□ -1.25
SMG6-202ENST00000354901 MYMXA0A1B0GTQ4 84 aa7.24□□□□□ -1.25
SMG6-202ENST00000354901 PLEKHB2Q96CS7 222 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms