RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 FAM57AQ8TBR7 257 aa6.03□□□□□ -1.44
CD46-203ENST00000354848 TRIOBPQ9H2D6 2365 aa6.03□□□□□ -1.44
CD46-203ENST00000354848 SLC25A29Q8N8R3 303 aa6.03□□□□□ -1.44
CD46-203ENST00000354848 TMEM126AQ9H061 195 aa6.03□□□□□ -1.44
CD46-203ENST00000354848 SMAD5-AS1Q9Y6J3 95 aa6.03□□□□□ -1.44
CD46-203ENST00000354848 LOC400499M0QZD8 3231 aa6.03□□□□□ -1.44
CD46-203ENST00000354848 RPL13AP40429 203 aaKnown RBP6.03□□□□□ -1.44
CD46-203ENST00000354848 DLX1P56177 255 aa6.03□□□□□ -1.44
CD46-203ENST00000354848 DLX6P56179 175 aa6.03□□□□□ -1.44
CD46-203ENST00000354848 C3orf36Q3SXR2 165 aa6.03□□□□□ -1.44
CD46-203ENST00000354848 PMS2CLQ68D20 193 aa6.03□□□□□ -1.44
CD46-203ENST00000354848 C2orf66Q6UXQ4 117 aa6.03□□□□□ -1.44
CD46-203ENST00000354848 CHCHD5Q9BSY4 110 aa6.03□□□□□ -1.44
CD46-203ENST00000354848 DMXL2Q8TDJ6 3036 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 PRAC2D3DTV9 90 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 EIF4EBP3O60516 100 aaPredicted RBP6.02□□□□□ -1.45
CD46-203ENST00000354848 IGHV1-8P0DP01 117 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 PRSS33Q8NF86 280 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 LINC01587Q99440 93 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 RAB1BQ9H0U4 201 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 CSMD1Q96PZ7 3565 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 TRAV2A0A0B4J234 112 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 IGHV1-3A0A0C4DH29 117 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 C11orf86A6NJI1 115 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 IGHV3-33P01772 117 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 IGHG3P01860 377 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 CRYGDP07320 174 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 ELANEP08246 267 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 SUMO2P61956 95 aaKnown RBP6.02□□□□□ -1.45
CD46-203ENST00000354848 PRB3Q04118 309 aaPredicted RBP6.02□□□□□ -1.45
CD46-203ENST00000354848 FOXC1Q12948 553 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 LINC01620Q4KN68 170 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 SPANXN1Q5VSR9 72 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 LYPD2Q6UXB3 125 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 TIMD4Q96H15 378 aa6.02□□□□□ -1.45
CD46-203ENST00000354848 TIMM23O14925 209 aa6.01□□□□□ -1.45
CD46-203ENST00000354848 EMP1P54849 157 aa6.01□□□□□ -1.45
CD46-203ENST00000354848 TSPEAR-AS2P59090 65 aa6.01□□□□□ -1.45
CD46-203ENST00000354848 IGLV4-69A0A075B6H9 119 aa6.01□□□□□ -1.45
CD46-203ENST00000354848 A4D1N5 150 aa6.01□□□□□ -1.45
CD46-203ENST00000354848 H7C2G1 150 aa6.01□□□□□ -1.45
CD46-203ENST00000354848 LGALS9O00182 355 aa6.01□□□□□ -1.45
CD46-203ENST00000354848 NDUFB3O43676 98 aa6.01□□□□□ -1.45
CD46-203ENST00000354848 P0DMU3 169 aa6.01□□□□□ -1.45
CD46-203ENST00000354848 FAM231AP0DMU4 169 aa6.01□□□□□ -1.45
CD46-203ENST00000354848 FAM231CP0DMU5 169 aa6.01□□□□□ -1.45
CD46-203ENST00000354848 CD59P13987 128 aa6.01□□□□□ -1.45
CD46-203ENST00000354848 LOXP28300 417 aaPredicted RBP6.01□□□□□ -1.45
CD46-203ENST00000354848 HERVK_113P61574 105 aa6.01□□□□□ -1.45
CD46-203ENST00000354848 ZNF474Q6S9Z5 364 aaPredicted RBP6.01□□□□□ -1.45
CD46-203ENST00000354848 C21orf62Q9NYP8 219 aa6.01□□□□□ -1.45
CD46-203ENST00000354848 IGHV4-4A0A075B6R2 117 aa6.01□□□□□ -1.45
CD46-203ENST00000354848 ATXN8Q156A1 80 aa6.01□□□□□ -1.45
CD46-203ENST00000354848 TMEM263Q8WUH6 116 aaKnown RBP6.01□□□□□ -1.45
CD46-203ENST00000354848 LINC01600Q96MT4 127 aa6.01□□□□□ -1.45
CD46-203ENST00000354848 SLC50A1Q9BRV3 221 aa6.01□□□□□ -1.45
CD46-203ENST00000354848 F8W735 103 aaPredicted RBP6□□□□□ -1.45
CD46-203ENST00000354848 H3BMM0 161 aa6□□□□□ -1.45
CD46-203ENST00000354848 TCF15Q12870 199 aa6□□□□□ -1.45
CD46-203ENST00000354848 ATP1A1-AS1Q5TC04 95 aa6□□□□□ -1.45
CD46-203ENST00000354848 NRGNQ92686 78 aa6□□□□□ -1.45
CD46-203ENST00000354848 UBE2WQ96B02 151 aa6□□□□□ -1.45
CD46-203ENST00000354848 RPL39LQ96EH5 51 aaKnown RBP6□□□□□ -1.45
CD46-203ENST00000354848 ROS1P08922 2347 aa6□□□□□ -1.45
CD46-203ENST00000354848 IGHV4-39P01824 125 aa6□□□□□ -1.45
CD46-203ENST00000354848 ATP5J2P56134 94 aa6□□□□□ -1.45
CD46-203ENST00000354848 RNF182Q8N6D2 247 aa6□□□□□ -1.45
CD46-203ENST00000354848 TRBV10-2A0A0K0K1G8 114 aa5.99□□□□□ -1.45
CD46-203ENST00000354848 A0A1W2PNU3 283 aaPredicted RBP5.99□□□□□ -1.45
CD46-203ENST00000354848 RNF223E7ERA6 249 aa5.99□□□□□ -1.45
CD46-203ENST00000354848 DUSP14O95147 198 aaKnown RBP5.99□□□□□ -1.45
CD46-203ENST00000354848 MFAP4P55083 255 aa5.99□□□□□ -1.45
CD46-203ENST00000354848 MRPL23Q16540 153 aaKnown RBP5.99□□□□□ -1.45
CD46-203ENST00000354848 C14orf178Q8N769 122 aaPredicted RBP5.99□□□□□ -1.45
CD46-203ENST00000354848 AMELXQ99217 191 aa5.99□□□□□ -1.45
CD46-203ENST00000354848 CSDC2Q9Y534 153 aaKnown RBP5.99□□□□□ -1.45
CD46-203ENST00000354848 TSHBP01222 138 aa5.99□□□□□ -1.45
CD46-203ENST00000354848 IGLV1-47P01700 117 aa5.99□□□□□ -1.45
CD46-203ENST00000354848 TACC2O95359 2948 aa5.99□□□□□ -1.45
CD46-203ENST00000354848 ARHGAP32A7KAX9 2087 aa5.99□□□□□ -1.45
CD46-203ENST00000354848 IGHV3OR16-8A0A075B7F1 116 aa5.99□□□□□ -1.45
CD46-203ENST00000354848 A0A0B4J2C4 111 aa5.99□□□□□ -1.45
CD46-203ENST00000354848 IGHV3-23P01764 117 aa5.99□□□□□ -1.45
CD46-203ENST00000354848 LINC00694P0DN24 101 aa5.99□□□□□ -1.45
CD46-203ENST00000354848 ZNF56Q15929 161 aa5.99□□□□□ -1.45
CD46-203ENST00000354848 PAPPA-AS1Q5QFB9 102 aa5.99□□□□□ -1.45
CD46-203ENST00000354848 AGPAT4-IT1Q9H0P7 198 aa5.99□□□□□ -1.45
CD46-203ENST00000354848 MSRB2Q9Y3D2 182 aa5.99□□□□□ -1.45
CD46-203ENST00000354848 RBAKDNA6NC62 111 aa5.98□□□□□ -1.45
CD46-203ENST00000354848 TMEM178BH3BS89 294 aa5.98□□□□□ -1.45
CD46-203ENST00000354848 BUB1B-PAK6H3BSN5 160 aa5.98□□□□□ -1.45
CD46-203ENST00000354848 Q1RN00 199 aa5.98□□□□□ -1.45
CD46-203ENST00000354848 FANCD2OSQ96PS1 177 aa5.98□□□□□ -1.45
CD46-203ENST00000354848 J3KRW8 73 aa5.98□□□□□ -1.45
CD46-203ENST00000354848 TMEM170BQ5T4T1 132 aa5.98□□□□□ -1.45
CD46-203ENST00000354848 C22orf34Q6ZV56 151 aa5.98□□□□□ -1.45
CD46-203ENST00000354848 CCL17Q92583 94 aa5.98□□□□□ -1.45
CD46-203ENST00000354848 DNAJC30Q96LL9 226 aa5.98□□□□□ -1.45
CD46-203ENST00000354848 BEX4Q9NWD9 120 aaPredicted RBP5.98□□□□□ -1.45
CD46-203ENST00000354848 IGLV11-55A0A075B6I3 123 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms