RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 ZNF257Q9Y2Q1 563 aa8.23□□□□□ -1.09
RTN3-204ENST00000354497 IGHV3-35A0A0C4DH35 117 aa8.22□□□□□ -1.09
RTN3-204ENST00000354497 CTXND1A0A1B0GTU2 59 aa8.22□□□□□ -1.09
RTN3-204ENST00000354497 FAM24AA6NFZ4 105 aa8.22□□□□□ -1.09
RTN3-204ENST00000354497 M0R2N4 97 aa8.22□□□□□ -1.09
RTN3-204ENST00000354497 SERPINE2P07093 398 aa8.22□□□□□ -1.09
RTN3-204ENST00000354497 PMCHP20382 165 aa8.22□□□□□ -1.09
RTN3-204ENST00000354497 MFAP2P55001 183 aa8.22□□□□□ -1.09
RTN3-204ENST00000354497 UNQ9165/PRO28630Q6UXU0 137 aa8.22□□□□□ -1.09
RTN3-204ENST00000354497 ZNF575Q86XF7 245 aa8.22□□□□□ -1.09
RTN3-204ENST00000354497 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.22□□□□□ -1.09
RTN3-204ENST00000354497 SCGB1C1Q8TD33 95 aa8.22□□□□□ -1.09
RTN3-204ENST00000354497 CCDC140Q96MF4 163 aa8.22□□□□□ -1.09
RTN3-204ENST00000354497 RAB40CQ96S21 281 aa8.22□□□□□ -1.09
RTN3-204ENST00000354497 SPAG8Q99932 426 aaPredicted RBP8.22□□□□□ -1.09
RTN3-204ENST00000354497 SPANXB1Q9NS25 103 aaPredicted RBP8.22□□□□□ -1.09
RTN3-204ENST00000354497 UFC1Q9Y3C8 167 aa8.22□□□□□ -1.09
RTN3-204ENST00000354497 GRIFINA4D1Z8 144 aa8.21□□□□□ -1.09
RTN3-204ENST00000354497 OR5AL1P0C617 328 aa8.21□□□□□ -1.09
RTN3-204ENST00000354497 ODF3L2Q3SX64 289 aa8.21□□□□□ -1.09
RTN3-204ENST00000354497 OR4A16Q8NH70 328 aa8.21□□□□□ -1.09
RTN3-204ENST00000354497 ZNF502Q8TBZ5 544 aa8.21□□□□□ -1.09
RTN3-204ENST00000354497 TSKUQ8WUA8 353 aa8.21□□□□□ -1.09
RTN3-204ENST00000354497 TMEM126AQ9H061 195 aa8.21□□□□□ -1.09
RTN3-204ENST00000354497 TMEM191AQ9H0A3 160 aa8.21□□□□□ -1.09
RTN3-204ENST00000354497 C11orf68Q9H3H3 251 aaKnown RBP8.21□□□□□ -1.09
RTN3-204ENST00000354497 KCNIP2Q9NS61 270 aa8.21□□□□□ -1.09
RTN3-204ENST00000354497 SS18L2Q9UHA2 77 aa8.21□□□□□ -1.09
RTN3-204ENST00000354497 PKD1P98161 4303 aa8.21□□□□□ -1.1
RTN3-204ENST00000354497 IGKV1-6A0A0C4DH72 117 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 FBLL1A6NHQ2 334 aaKnown RBP8.2□□□□□ -1.1
RTN3-204ENST00000354497 FABP2P12104 132 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 APRG1Q8IVJ8 170 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 ZBTB34Q8NCN2 500 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 TMEM70Q9BUB7 260 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 C1QTNF4Q9BXJ3 329 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 SLC39A9Q9NUM3 307 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 SPCS1Q9Y6A9 102 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 TRBV6-6A0A0A6YYG2 114 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 A4D1N5 150 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 OR4C46A6NHA9 309 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 C9JCJ5 164 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 F8W735 103 aaPredicted RBP8.2□□□□□ -1.1
RTN3-204ENST00000354497 RTL8CO15255 209 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 SAA1P0DJI8 122 aaPredicted RBP8.2□□□□□ -1.1
RTN3-204ENST00000354497 COX8AP10176 69 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 TMEM50BP56557 158 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 MMD2Q8IY49 270 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 VGLL1Q99990 258 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 PECRQ9BY49 303 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 PRR13Q9NZ81 148 aa8.2□□□□□ -1.1
RTN3-204ENST00000354497 IGHV4-4A0A075B6R2 117 aa8.19□□□□□ -1.1
RTN3-204ENST00000354497 A0A0A6YYD4 124 aa8.19□□□□□ -1.1
RTN3-204ENST00000354497 C11orf94C9JXX5 98 aa8.19□□□□□ -1.1
RTN3-204ENST00000354497 SOCS1O15524 211 aa8.19□□□□□ -1.1
RTN3-204ENST00000354497 C8orf88P0DMB2 117 aa8.19□□□□□ -1.1
RTN3-204ENST00000354497 DEFA4P12838 97 aa8.19□□□□□ -1.1
RTN3-204ENST00000354497 MYOD1P15172 320 aa8.19□□□□□ -1.1
RTN3-204ENST00000354497 PI3P19957 117 aa8.19□□□□□ -1.1
RTN3-204ENST00000354497 Q6Q795 121 aa8.19□□□□□ -1.1
RTN3-204ENST00000354497 LYZL2Q7Z4W2 148 aa8.19□□□□□ -1.1
RTN3-204ENST00000354497 NHLRC2Q8NBF2 726 aa8.19□□□□□ -1.1
RTN3-204ENST00000354497 NDFIP1Q9BT67 221 aa8.19□□□□□ -1.1
RTN3-204ENST00000354497 A0A087WX48 190 aa8.18□□□□□ -1.1
RTN3-204ENST00000354497 HELTA6NFD8 242 aa8.18□□□□□ -1.1
RTN3-204ENST00000354497 NPIPB5A8MRT5 1133 aa8.18□□□□□ -1.1
RTN3-204ENST00000354497 TEX22C9J3V5 150 aa8.18□□□□□ -1.1
RTN3-204ENST00000354497 CA1P00915 261 aaPredicted RBP8.18□□□□□ -1.1
RTN3-204ENST00000354497 HIST1H1EP10412 219 aaKnown RBP8.18□□□□□ -1.1
RTN3-204ENST00000354497 RPL27AP46776 148 aaKnown RBP8.18□□□□□ -1.1
RTN3-204ENST00000354497 ZNF90Q03938 601 aa8.18□□□□□ -1.1
RTN3-204ENST00000354497 SPATA12Q7Z6I5 190 aa8.18□□□□□ -1.1
RTN3-204ENST00000354497 MAPKAPK5-AS1Q8N8E1 139 aa8.18□□□□□ -1.1
RTN3-204ENST00000354497 OSR1Q8TAX0 266 aaPredicted RBP8.18□□□□□ -1.1
RTN3-204ENST00000354497 TMEM222Q9H0R3 208 aa8.18□□□□□ -1.1
RTN3-204ENST00000354497 FNDC4Q9H6D8 234 aaPredicted RBP8.18□□□□□ -1.1
RTN3-204ENST00000354497 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.18□□□□□ -1.1
RTN3-204ENST00000354497 ANXA10Q9UJ72 324 aa8.18□□□□□ -1.1
RTN3-204ENST00000354497 HSPG2P98160 4391 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 TRBV7-1A0A0A6YYK4 115 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 GAGE12JA6NER3 117 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 LINC00473A8K010 186 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 FCGR3BO75015 233 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 GAGE7O76087 117 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 GAGE12FP0CL80 117 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 GAGE12GP0CL81 117 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 GAGE12IP0CL82 117 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 AREGP15514 252 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 DUTP33316 252 aaKnown RBP8.17□□□□□ -1.1
RTN3-204ENST00000354497 HBG1P69891 147 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 HBG2P69892 147 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 GAGE4Q13068 117 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 ARFRP1Q13795 201 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 TMEM136Q6ZRR5 245 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 BPIFA4PQ86YQ2 179 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 VKORC1L1Q8N0U8 176 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 SMIM20Q8N5G0 67 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 ZNF645Q8N7E2 425 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 ADTRPQ96IZ2 230 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 FANCD2OSQ96PS1 177 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms