RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 FDCSPQ8NFU4 85 aa10.92□□□□□ -0.66
RLIM-202ENST00000349225 SCGB3A1Q96QR1 104 aa10.92□□□□□ -0.66
RLIM-202ENST00000349225 SMIM2Q9BVW6 85 aa10.92□□□□□ -0.66
RLIM-202ENST00000349225 BUB1B-PAK6H3BSN5 160 aa10.92□□□□□ -0.66
RLIM-202ENST00000349225 CRYGDP07320 174 aa10.92□□□□□ -0.66
RLIM-202ENST00000349225 TSPEAR-AS2P59090 65 aa10.92□□□□□ -0.66
RLIM-202ENST00000349225 FAM27E3Q08E93 113 aa10.92□□□□□ -0.66
RLIM-202ENST00000349225 C3orf36Q3SXR2 165 aa10.92□□□□□ -0.66
RLIM-202ENST00000349225 MSRB2Q9Y3D2 182 aa10.92□□□□□ -0.66
RLIM-202ENST00000349225 ELANEP08246 267 aa10.91□□□□□ -0.66
RLIM-202ENST00000349225 C17orf100A8MU93 164 aa10.91□□□□□ -0.66
RLIM-202ENST00000349225 VCX2Q9H322 139 aa10.91□□□□□ -0.66
RLIM-202ENST00000349225 IGHV3-35A0A0C4DH35 117 aa10.9□□□□□ -0.66
RLIM-202ENST00000349225 IGHV3-30P01768 117 aa10.9□□□□□ -0.66
RLIM-202ENST00000349225 IGHV3-30-5P0DP03 117 aa10.9□□□□□ -0.66
RLIM-202ENST00000349225 EMP1P54849 157 aa10.9□□□□□ -0.66
RLIM-202ENST00000349225 GAGE12JA6NER3 117 aa10.9□□□□□ -0.66
RLIM-202ENST00000349225 GAGE7O76087 117 aa10.9□□□□□ -0.66
RLIM-202ENST00000349225 GAGE12FP0CL80 117 aa10.9□□□□□ -0.66
RLIM-202ENST00000349225 GAGE12GP0CL81 117 aa10.9□□□□□ -0.66
RLIM-202ENST00000349225 GAGE12IP0CL82 117 aa10.9□□□□□ -0.66
RLIM-202ENST00000349225 GAGE4Q13068 117 aa10.9□□□□□ -0.66
RLIM-202ENST00000349225 RPL39LQ96EH5 51 aaKnown RBP10.9□□□□□ -0.66
RLIM-202ENST00000349225 TPRP12270 2363 aaKnown RBP10.9□□□□□ -0.66
RLIM-202ENST00000349225 ADIPOQQ15848 244 aa10.9□□□□□ -0.66
RLIM-202ENST00000349225 NCOR1O75376 2440 aa10.9□□□□□ -0.67
RLIM-202ENST00000349225 MBD3L4A6NDZ8 208 aaPredicted RBP10.89□□□□□ -0.67
RLIM-202ENST00000349225 MBD3L3A6NE82 208 aaPredicted RBP10.89□□□□□ -0.67
RLIM-202ENST00000349225 MBD3L5A6NJ08 208 aaPredicted RBP10.89□□□□□ -0.67
RLIM-202ENST00000349225 SLC25A20O43772 301 aa10.89□□□□□ -0.67
RLIM-202ENST00000349225 TMEM95Q3KNT9 176 aa10.89□□□□□ -0.67
RLIM-202ENST00000349225 MBD3L2Q8NHZ7 208 aaPredicted RBP10.89□□□□□ -0.67
RLIM-202ENST00000349225 GAGE2BQ13066 116 aa10.89□□□□□ -0.67
RLIM-202ENST00000349225 GAGE2EQ4V326 116 aa10.89□□□□□ -0.67
RLIM-202ENST00000349225 C10orf126Q8N4M7 172 aa10.89□□□□□ -0.67
RLIM-202ENST00000349225 ODF3Q96PU9 254 aa10.89□□□□□ -0.67
RLIM-202ENST00000349225 GAGE2DQ9UEU5 116 aa10.89□□□□□ -0.67
RLIM-202ENST00000349225 POLEQ07864 2286 aa10.89□□□□□ -0.67
RLIM-202ENST00000349225 RPL7P18124 248 aaKnown RBP10.89□□□□□ -0.67
RLIM-202ENST00000349225 FAM159AQ6UWV7 190 aa10.89□□□□□ -0.67
RLIM-202ENST00000349225 FAM215AQ9Y5M1 114 aa10.89□□□□□ -0.67
RLIM-202ENST00000349225 IGLV4-69A0A075B6H9 119 aa10.88□□□□□ -0.67
RLIM-202ENST00000349225 IGLV11-55A0A075B6I3 123 aa10.88□□□□□ -0.67
RLIM-202ENST00000349225 TRAV8-2A0A0B4J237 113 aa10.88□□□□□ -0.67
RLIM-202ENST00000349225 C9JAW5 83 aa10.88□□□□□ -0.67
RLIM-202ENST00000349225 TMEM262E9PQX1 116 aa10.88□□□□□ -0.67
RLIM-202ENST00000349225 ONECUT1Q9UBC0 465 aa10.88□□□□□ -0.67
RLIM-202ENST00000349225 WNK2Q9Y3S1 2297 aa10.88□□□□□ -0.67
RLIM-202ENST00000349225 C11orf86A6NJI1 115 aa10.88□□□□□ -0.67
RLIM-202ENST00000349225 TSHBP01222 138 aa10.88□□□□□ -0.67
RLIM-202ENST00000349225 COX7A1P24310 79 aa10.88□□□□□ -0.67
RLIM-202ENST00000349225 DEFB104AQ8WTQ1 72 aa10.88□□□□□ -0.67
RLIM-202ENST00000349225 AGPAT4-IT1Q9H0P7 198 aa10.88□□□□□ -0.67
RLIM-202ENST00000349225 LRBAP50851 2863 aa10.88□□□□□ -0.67
RLIM-202ENST00000349225 RAX2Q96IS3 184 aa10.88□□□□□ -0.67
RLIM-202ENST00000349225 ARHGAP32A7KAX9 2087 aa10.87□□□□□ -0.67
RLIM-202ENST00000349225 C2orf66Q6UXQ4 117 aa10.87□□□□□ -0.67
RLIM-202ENST00000349225 AMELXQ99217 191 aa10.87□□□□□ -0.67
RLIM-202ENST00000349225 CTSGP08311 255 aa10.86□□□□□ -0.67
RLIM-202ENST00000349225 NDPQ00604 133 aa10.86□□□□□ -0.67
RLIM-202ENST00000349225 Q8N1Y9 231 aa10.86□□□□□ -0.67
RLIM-202ENST00000349225 RAB1BQ9H0U4 201 aa10.86□□□□□ -0.67
RLIM-202ENST00000349225 TIMM23O14925 209 aa10.86□□□□□ -0.67
RLIM-202ENST00000349225 IFITM1P13164 125 aa10.86□□□□□ -0.67
RLIM-202ENST00000349225 CD59P13987 128 aa10.86□□□□□ -0.67
RLIM-202ENST00000349225 C14orf178Q8N769 122 aaPredicted RBP10.86□□□□□ -0.67
RLIM-202ENST00000349225 IGHV4-4A0A075B6R2 117 aa10.86□□□□□ -0.67
RLIM-202ENST00000349225 LY6LH3BQJ8 138 aa10.86□□□□□ -0.67
RLIM-202ENST00000349225 MFAP4P55083 255 aa10.86□□□□□ -0.67
RLIM-202ENST00000349225 SUMO2P61956 95 aaKnown RBP10.86□□□□□ -0.67
RLIM-202ENST00000349225 PRR9Q5T870 116 aa10.86□□□□□ -0.67
RLIM-202ENST00000349225 TEX49A0A1B0GTD5 131 aa10.85□□□□□ -0.67
RLIM-202ENST00000349225 SNCGO76070 127 aa10.85□□□□□ -0.67
RLIM-202ENST00000349225 DUSP14O95147 198 aaKnown RBP10.85□□□□□ -0.67
RLIM-202ENST00000349225 NTN5Q8WTR8 489 aaPredicted RBP10.85□□□□□ -0.67
RLIM-202ENST00000349225 IGHV3-66A0A0C4DH42 116 aa10.85□□□□□ -0.67
RLIM-202ENST00000349225 SCGB1C2P0DMR2 95 aa10.85□□□□□ -0.67
RLIM-202ENST00000349225 SPANXN1Q5VSR9 72 aa10.85□□□□□ -0.67
RLIM-202ENST00000349225 NUP37Q8NFH4 326 aa10.85□□□□□ -0.67
RLIM-202ENST00000349225 PRO1854Q9UHT4 67 aa10.85□□□□□ -0.67
RLIM-202ENST00000349225 CEP250Q9BV73 2442 aa10.85□□□□□ -0.67
RLIM-202ENST00000349225 CENPVL3A0A0U1RRI6 287 aa10.84□□□□□ -0.67
RLIM-202ENST00000349225 ASIPP42127 132 aa10.84□□□□□ -0.67
RLIM-202ENST00000349225 SLC25A29Q8N8R3 303 aa10.84□□□□□ -0.67
RLIM-202ENST00000349225 IGF1P05019 195 aa10.84□□□□□ -0.67
RLIM-202ENST00000349225 ORMDL2Q53FV1 153 aa10.84□□□□□ -0.67
RLIM-202ENST00000349225 LYRM7Q5U5X0 104 aa10.84□□□□□ -0.67
RLIM-202ENST00000349225 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.84□□□□□ -0.67
RLIM-202ENST00000349225 C21orf62Q9NYP8 219 aa10.84□□□□□ -0.67
RLIM-202ENST00000349225 KAAG1Q9UBP8 84 aa10.83□□□□□ -0.67
RLIM-202ENST00000349225 TNFRSF18Q9Y5U5 241 aa10.83□□□□□ -0.67
RLIM-202ENST00000349225 C3orf56Q8N813 242 aa10.83□□□□□ -0.68
RLIM-202ENST00000349225 TTC32Q5I0X7 151 aa10.83□□□□□ -0.68
RLIM-202ENST00000349225 C1orf122Q6ZSJ8 110 aa10.83□□□□□ -0.68
RLIM-202ENST00000349225 CNOT1A5YKK6 2376 aaKnown RBP10.83□□□□□ -0.68
RLIM-202ENST00000349225 IGHV3OR16-13A0A075B7E8 117 aa10.82□□□□□ -0.68
RLIM-202ENST00000349225 IGHV3-74A0A0B4J1X5 117 aa10.82□□□□□ -0.68
RLIM-202ENST00000349225 IGHV3-33P01772 117 aa10.82□□□□□ -0.68
RLIM-202ENST00000349225 ASH1LQ9NR48 2969 aaKnown RBP10.82□□□□□ -0.68
RLIM-202ENST00000349225 SLC50A1Q9BRV3 221 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms