RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 USP9XQ93008 2570 aaPredicted RBP12.18□□□□□ -0.46
CARMIL3-201ENST00000342740 NPYP01303 97 aa12.18□□□□□ -0.46
CARMIL3-201ENST00000342740 TRAV13-1A0A0B4J241 112 aa12.18□□□□□ -0.46
CARMIL3-201ENST00000342740 MORN3Q6PF18 240 aaPredicted RBP12.18□□□□□ -0.46
CARMIL3-201ENST00000342740 SIGLEC8Q9NYZ4 499 aa12.18□□□□□ -0.46
CARMIL3-201ENST00000342740 TP53TG1Q9Y2A0 90 aa12.18□□□□□ -0.46
CARMIL3-201ENST00000342740 A8MWV9 139 aa12.18□□□□□ -0.46
CARMIL3-201ENST00000342740 LMO4P61968 165 aa12.18□□□□□ -0.46
CARMIL3-201ENST00000342740 FOXE3Q13461 319 aa12.18□□□□□ -0.46
CARMIL3-201ENST00000342740 C19orf84I3L1E1 186 aa12.17□□□□□ -0.46
CARMIL3-201ENST00000342740 DEFB121Q5J5C9 76 aa12.17□□□□□ -0.46
CARMIL3-201ENST00000342740 MRPL53Q96EL3 112 aaKnown RBP12.17□□□□□ -0.46
CARMIL3-201ENST00000342740 ZNF479Q96JC4 524 aa12.17□□□□□ -0.46
CARMIL3-201ENST00000342740 PYGO2Q9BRQ0 406 aa12.17□□□□□ -0.46
CARMIL3-201ENST00000342740 LENEPQ9Y5L5 61 aa12.17□□□□□ -0.46
CARMIL3-201ENST00000342740 USP9YO00507 2555 aaPredicted RBP12.17□□□□□ -0.46
CARMIL3-201ENST00000342740 TMEM238C9JI98 176 aa12.17□□□□□ -0.46
CARMIL3-201ENST00000342740 NUP210LQ5VU65 1888 aa12.17□□□□□ -0.46
CARMIL3-201ENST00000342740 LY6G5BQ8NDX9 201 aa12.16□□□□□ -0.46
CARMIL3-201ENST00000342740 IGHV1-24A0A0C4DH33 117 aa12.16□□□□□ -0.46
CARMIL3-201ENST00000342740 CFHR3Q02985 330 aa12.16□□□□□ -0.46
CARMIL3-201ENST00000342740 NAA38Q9BRA0 125 aaKnown RBP12.16□□□□□ -0.46
CARMIL3-201ENST00000342740 RBAKDNA6NC62 111 aa12.16□□□□□ -0.46
CARMIL3-201ENST00000342740 LINC00158P58513 81 aa12.16□□□□□ -0.46
CARMIL3-201ENST00000342740 C20orf144Q9BQM9 153 aa12.16□□□□□ -0.46
CARMIL3-201ENST00000342740 SPXQ9BT56 116 aa12.16□□□□□ -0.46
CARMIL3-201ENST00000342740 SORL1Q92673 2214 aa12.15□□□□□ -0.46
CARMIL3-201ENST00000342740 C21orf62-AS1Q17RA5 79 aa12.15□□□□□ -0.46
CARMIL3-201ENST00000342740 C1orf229Q6ZS94 237 aaPredicted RBP12.15□□□□□ -0.46
CARMIL3-201ENST00000342740 NACAE9PAV3 2078 aa12.15□□□□□ -0.46
CARMIL3-201ENST00000342740 RBMY1BA6NDE4 496 aaKnown RBP12.15□□□□□ -0.46
CARMIL3-201ENST00000342740 RBMY1EA6NEQ0 496 aaKnown RBP12.15□□□□□ -0.46
CARMIL3-201ENST00000342740 GAGE12JA6NER3 117 aa12.15□□□□□ -0.46
CARMIL3-201ENST00000342740 RBMY1DP0C7P1 496 aaKnown RBP12.15□□□□□ -0.46
CARMIL3-201ENST00000342740 RBMY1A1P0DJD3 496 aaKnown RBP12.15□□□□□ -0.46
CARMIL3-201ENST00000342740 RBMY1CP0DJD4 496 aa12.15□□□□□ -0.46
CARMIL3-201ENST00000342740 GAGE1Q13065 139 aa12.15□□□□□ -0.46
CARMIL3-201ENST00000342740 GAGE4Q13068 117 aa12.15□□□□□ -0.46
CARMIL3-201ENST00000342740 GAGE5Q13069 117 aa12.15□□□□□ -0.46
CARMIL3-201ENST00000342740 GAGE13Q4V321 117 aa12.15□□□□□ -0.46
CARMIL3-201ENST00000342740 FANCD2OSQ96PS1 177 aa12.15□□□□□ -0.46
CARMIL3-201ENST00000342740 GNRH2O43555 120 aa12.15□□□□□ -0.47
CARMIL3-201ENST00000342740 AZU1P20160 251 aa12.15□□□□□ -0.47
CARMIL3-201ENST00000342740 SMIM2Q9BVW6 85 aa12.15□□□□□ -0.47
CARMIL3-201ENST00000342740 FOXI2Q6ZQN5 318 aa12.14□□□□□ -0.47
CARMIL3-201ENST00000342740 NEGR1Q7Z3B1 354 aa12.14□□□□□ -0.47
CARMIL3-201ENST00000342740 CFHR4Q92496 578 aa12.14□□□□□ -0.47
CARMIL3-201ENST00000342740 CCL24O00175 119 aa12.14□□□□□ -0.47
CARMIL3-201ENST00000342740 SAMD5Q5TGI4 173 aa12.14□□□□□ -0.47
CARMIL3-201ENST00000342740 RASL10AQ92737 203 aa12.14□□□□□ -0.47
CARMIL3-201ENST00000342740 LRP4O75096 1905 aa12.13□□□□□ -0.47
CARMIL3-201ENST00000342740 WI2-2373I1.2A0A1W2PRP0 233 aa12.13□□□□□ -0.47
CARMIL3-201ENST00000342740 GAGE12BA1L429 117 aa12.13□□□□□ -0.47
CARMIL3-201ENST00000342740 I3L3M4 83 aa12.13□□□□□ -0.47
CARMIL3-201ENST00000342740 GAGE7O76087 117 aa12.13□□□□□ -0.47
CARMIL3-201ENST00000342740 GAGE12FP0CL80 117 aa12.13□□□□□ -0.47
CARMIL3-201ENST00000342740 GAGE12GP0CL81 117 aa12.13□□□□□ -0.47
CARMIL3-201ENST00000342740 GAGE12IP0CL82 117 aa12.13□□□□□ -0.47
CARMIL3-201ENST00000342740 WIPF2Q8TF74 440 aaPredicted RBP12.13□□□□□ -0.47
CARMIL3-201ENST00000342740 IGHG2P01859 326 aa12.13□□□□□ -0.47
CARMIL3-201ENST00000342740 SLURP1P55000 103 aa12.13□□□□□ -0.47
CARMIL3-201ENST00000342740 CKS1BP61024 79 aa12.13□□□□□ -0.47
CARMIL3-201ENST00000342740 ZNF295-AS1Q8N0V1 137 aa12.13□□□□□ -0.47
CARMIL3-201ENST00000342740 TSSC4Q9Y5U2 329 aaPredicted RBP12.13□□□□□ -0.47
CARMIL3-201ENST00000342740 TMEM86BQ8N661 226 aa12.13□□□□□ -0.47
CARMIL3-201ENST00000342740 ERG28Q9UKR5 140 aa12.13□□□□□ -0.47
CARMIL3-201ENST00000342740 NPC2P61916 151 aa12.12□□□□□ -0.47
CARMIL3-201ENST00000342740 C16orf54Q6UWD8 224 aa12.12□□□□□ -0.47
CARMIL3-201ENST00000342740 TIMM21Q9BVV7 248 aa12.12□□□□□ -0.47
CARMIL3-201ENST00000342740 TNRC6AQ8NDV7 1962 aaKnown RBP12.12□□□□□ -0.47
CARMIL3-201ENST00000342740 SPRY2O43597 315 aa12.11□□□□□ -0.47
CARMIL3-201ENST00000342740 PAX2Q02962 417 aa12.11□□□□□ -0.47
CARMIL3-201ENST00000342740 ZNRF2Q8NHG8 242 aa12.11□□□□□ -0.47
CARMIL3-201ENST00000342740 ESDP10768 282 aa12.11□□□□□ -0.47
CARMIL3-201ENST00000342740 IGF2BP2-AS1Q96M15 143 aa12.11□□□□□ -0.47
CARMIL3-201ENST00000342740 C11orf68Q9H3H3 251 aaKnown RBP12.11□□□□□ -0.47
CARMIL3-201ENST00000342740 C6orf226Q5I0X4 101 aa12.11□□□□□ -0.47
CARMIL3-201ENST00000342740 EIF4EBP1Q13541 118 aaPredicted RBP12.11□□□□□ -0.47
CARMIL3-201ENST00000342740 CHAC1Q9BUX1 264 aa12.11□□□□□ -0.47
CARMIL3-201ENST00000342740 IGKV1D-37A0A075B6S9 117 aa12.1□□□□□ -0.47
CARMIL3-201ENST00000342740 ODF3BA8MYP8 253 aa12.1□□□□□ -0.47
CARMIL3-201ENST00000342740 PMVKQ15126 192 aa12.1□□□□□ -0.47
CARMIL3-201ENST00000342740 SETD2Q9BYW2 2564 aaPredicted RBP12.1□□□□□ -0.47
CARMIL3-201ENST00000342740 JMJD1CQ15652 2540 aa12.1□□□□□ -0.47
CARMIL3-201ENST00000342740 IGLC2P0DOY2 106 aa12.1□□□□□ -0.47
CARMIL3-201ENST00000342740 IGLC3P0DOY3 106 aa12.1□□□□□ -0.47
CARMIL3-201ENST00000342740 ZFYVE26Q68DK2 2539 aa12.1□□□□□ -0.47
CARMIL3-201ENST00000342740 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.1□□□□□ -0.47
CARMIL3-201ENST00000342740 IGHV3-38A0A0C4DH36 116 aa12.1□□□□□ -0.47
CARMIL3-201ENST00000342740 PRAC2D3DTV9 90 aa12.1□□□□□ -0.47
CARMIL3-201ENST00000342740 M0R2P5 195 aa12.1□□□□□ -0.47
CARMIL3-201ENST00000342740 FSTL3O95633 263 aa12.1□□□□□ -0.47
CARMIL3-201ENST00000342740 TMEM141Q96I45 108 aa12.1□□□□□ -0.47
CARMIL3-201ENST00000342740 KLF12Q9Y4X4 402 aa12.1□□□□□ -0.47
CARMIL3-201ENST00000342740 IGLL1P15814 213 aa12.09□□□□□ -0.47
CARMIL3-201ENST00000342740 PLA2G5P39877 138 aa12.09□□□□□ -0.47
CARMIL3-201ENST00000342740 PRIMA1Q86XR5 153 aa12.09□□□□□ -0.47
CARMIL3-201ENST00000342740 SCGB1A1P11684 91 aa12.09□□□□□ -0.47
CARMIL3-201ENST00000342740 C20orf78Q9BR46 151 aa12.09□□□□□ -0.47
CARMIL3-201ENST00000342740 LGALS9BQ3B8N2 356 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms