RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 FXYD7P58549 80 aa13.11□□□□□ -0.31
CDK11B-201ENST00000340677 IFI27P40305 119 aaPredicted RBP13.11□□□□□ -0.31
CDK11B-201ENST00000340677 LINC00596Q86U02 117 aa13.11□□□□□ -0.31
CDK11B-201ENST00000340677 SLC25A2Q9BXI2 301 aa13.11□□□□□ -0.31
CDK11B-201ENST00000340677 CELSR3Q9NYQ7 3312 aa13.11□□□□□ -0.31
CDK11B-201ENST00000340677 WDR83OSQ9Y284 106 aa13.1□□□□□ -0.31
CDK11B-201ENST00000340677 CFAP47Q6ZTR5 3102 aa13.1□□□□□ -0.31
CDK11B-201ENST00000340677 J3QT63 122 aa13.1□□□□□ -0.31
CDK11B-201ENST00000340677 FGF12P61328 243 aa13.1□□□□□ -0.31
CDK11B-201ENST00000340677 NPC2P61916 151 aa13.1□□□□□ -0.31
CDK11B-201ENST00000340677 C11orf45Q8TAV5 145 aa13.1□□□□□ -0.31
CDK11B-201ENST00000340677 DMXL2Q8TDJ6 3036 aa13.1□□□□□ -0.31
CDK11B-201ENST00000340677 IGKV1-6A0A0C4DH72 117 aa13.09□□□□□ -0.31
CDK11B-201ENST00000340677 FP248Q71RG6 208 aaPredicted RBP13.09□□□□□ -0.31
CDK11B-201ENST00000340677 LINC01600Q96MT4 127 aa13.09□□□□□ -0.31
CDK11B-201ENST00000340677 CCL21O00585 134 aa13.09□□□□□ -0.31
CDK11B-201ENST00000340677 FBXL19-AS1Q494R0 122 aa13.09□□□□□ -0.31
CDK11B-201ENST00000340677 Q8IYB0 196 aa13.09□□□□□ -0.31
CDK11B-201ENST00000340677 CD177Q8N6Q3 437 aa13.09□□□□□ -0.31
CDK11B-201ENST00000340677 PGLYRP4Q96LB8 373 aa13.09□□□□□ -0.31
CDK11B-201ENST00000340677 HBDP02042 147 aa13.08□□□□□ -0.32
CDK11B-201ENST00000340677 HIST1H4AP62805 103 aaKnown RBP13.08□□□□□ -0.32
CDK11B-201ENST00000340677 WFDC3Q8IUB2 231 aa13.08□□□□□ -0.32
CDK11B-201ENST00000340677 H3BT86 120 aa13.08□□□□□ -0.32
CDK11B-201ENST00000340677 UBE2L3P68036 154 aaKnown RBP13.08□□□□□ -0.32
CDK11B-201ENST00000340677 FAM90A1Q86YD7 464 aa13.08□□□□□ -0.32
CDK11B-201ENST00000340677 ASPMQ8IZT6 3477 aa13.07□□□□□ -0.32
CDK11B-201ENST00000340677 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.07□□□□□ -0.32
CDK11B-201ENST00000340677 M0R1B8 84 aa13.07□□□□□ -0.32
CDK11B-201ENST00000340677 TLN1Q9Y490 2541 aaKnown RBP13.07□□□□□ -0.32
CDK11B-201ENST00000340677 PIGBOS1A0A0B4J2F0 54 aa13.07□□□□□ -0.32
CDK11B-201ENST00000340677 MIC13Q5XKP0 118 aa13.07□□□□□ -0.32
CDK11B-201ENST00000340677 NUP37Q8NFH4 326 aa13.07□□□□□ -0.32
CDK11B-201ENST00000340677 TRGV8A0A0C4DH27 118 aa13.06□□□□□ -0.32
CDK11B-201ENST00000340677 IGHV3-13P01766 116 aa13.06□□□□□ -0.32
CDK11B-201ENST00000340677 C5orf38Q86SI9 138 aa13.06□□□□□ -0.32
CDK11B-201ENST00000340677 CXXC4Q9H2H0 198 aa13.06□□□□□ -0.32
CDK11B-201ENST00000340677 NDUFA11Q86Y39 141 aa13.06□□□□□ -0.32
CDK11B-201ENST00000340677 PRR14LQ5THK1 2151 aa13.06□□□□□ -0.32
CDK11B-201ENST00000340677 PRRC2CQ9Y520 2896 aaKnown RBP13.06□□□□□ -0.32
CDK11B-201ENST00000340677 TRAV26-2A0A0B4J265 109 aa13.05□□□□□ -0.32
CDK11B-201ENST00000340677 SPRY3O43610 288 aa13.05□□□□□ -0.32
CDK11B-201ENST00000340677 CD40P25942 277 aa13.05□□□□□ -0.32
CDK11B-201ENST00000340677 C20orf204Q6ZNR8 217 aa13.05□□□□□ -0.32
CDK11B-201ENST00000340677 SERP1Q9Y6X1 66 aa13.05□□□□□ -0.32
CDK11B-201ENST00000340677 IGLV3-9A0A075B6K5 115 aa13.05□□□□□ -0.32
CDK11B-201ENST00000340677 TMEM170BQ5T4T1 132 aa13.05□□□□□ -0.32
CDK11B-201ENST00000340677 C1orf158Q8N1D5 194 aa13.05□□□□□ -0.32
CDK11B-201ENST00000340677 UBALD1Q8TB05 177 aa13.05□□□□□ -0.32
CDK11B-201ENST00000340677 HOXB4P17483 251 aaPredicted RBP13.04□□□□□ -0.32
CDK11B-201ENST00000340677 HIST2H2BCQ6DN03 193 aa13.04□□□□□ -0.32
CDK11B-201ENST00000340677 HIST2H2BDQ6DRA6 164 aa13.04□□□□□ -0.32
CDK11B-201ENST00000340677 WDR86Q86TI4 376 aa13.04□□□□□ -0.32
CDK11B-201ENST00000340677 POLEQ07864 2286 aa13.04□□□□□ -0.32
CDK11B-201ENST00000340677 LOC389332A0A1B0GUA5 103 aa13.04□□□□□ -0.32
CDK11B-201ENST00000340677 H3BTX0 84 aa13.03□□□□□ -0.32
CDK11B-201ENST00000340677 CCL8P80075 99 aa13.03□□□□□ -0.32
CDK11B-201ENST00000340677 RNF182Q8N6D2 247 aa13.03□□□□□ -0.32
CDK11B-201ENST00000340677 PIEZO2Q9H5I5 2752 aa13.03□□□□□ -0.32
CDK11B-201ENST00000340677 H3BS24 57 aa13.03□□□□□ -0.32
CDK11B-201ENST00000340677 DGAT2L7PQ6IED9 249 aa13.03□□□□□ -0.32
CDK11B-201ENST00000340677 SERP2Q8N6R1 65 aa13.03□□□□□ -0.32
CDK11B-201ENST00000340677 MGST2Q99735 147 aa13.03□□□□□ -0.32
CDK11B-201ENST00000340677 PRSS22Q9GZN4 317 aa13.03□□□□□ -0.32
CDK11B-201ENST00000340677 Q9UF83 564 aa13.03□□□□□ -0.32
CDK11B-201ENST00000340677 P0DMU3 169 aa13.02□□□□□ -0.32
CDK11B-201ENST00000340677 FAM231AP0DMU4 169 aa13.02□□□□□ -0.32
CDK11B-201ENST00000340677 FAM231CP0DMU5 169 aa13.02□□□□□ -0.32
CDK11B-201ENST00000340677 CXCL5P42830 114 aa13.02□□□□□ -0.32
CDK11B-201ENST00000340677 CD69Q07108 199 aa13.02□□□□□ -0.32
CDK11B-201ENST00000340677 SMCR5Q8TEV8 140 aa13.02□□□□□ -0.32
CDK11B-201ENST00000340677 SMIM26A0A096LP01 95 aa13.02□□□□□ -0.33
CDK11B-201ENST00000340677 PAX8Q06710 450 aa13.02□□□□□ -0.33
CDK11B-201ENST00000340677 LINC00643Q86TS7 51 aa13.02□□□□□ -0.33
CDK11B-201ENST00000340677 RNASE6Q93091 150 aaKnown RBP13.02□□□□□ -0.33
CDK11B-201ENST00000340677 C7orf69Q9H7B7 122 aa13.02□□□□□ -0.33
CDK11B-201ENST00000340677 TEX22C9J3V5 150 aa13.01□□□□□ -0.33
CDK11B-201ENST00000340677 SS18Q15532 418 aa13.01□□□□□ -0.33
CDK11B-201ENST00000340677 C22orf34Q6ZV56 151 aa13.01□□□□□ -0.33
CDK11B-201ENST00000340677 RNF7Q9UBF6 113 aa13.01□□□□□ -0.33
CDK11B-201ENST00000340677 PKD1L2Q7Z442 2459 aa13□□□□□ -0.33
CDK11B-201ENST00000340677 TRBV6-6A0A0A6YYG2 114 aa13□□□□□ -0.33
CDK11B-201ENST00000340677 METTL26Q96S19 204 aa13□□□□□ -0.33
CDK11B-201ENST00000340677 BSNQ9UPA5 3926 aa13□□□□□ -0.33
CDK11B-201ENST00000340677 TRBV10-2A0A0K0K1G8 114 aa13□□□□□ -0.33
CDK11B-201ENST00000340677 MSMPQ1L6U9 139 aa13□□□□□ -0.33
CDK11B-201ENST00000340677 DEFB121Q5J5C9 76 aa13□□□□□ -0.33
CDK11B-201ENST00000340677 C9orf139Q6ZV77 190 aa13□□□□□ -0.33
CDK11B-201ENST00000340677 RPP21Q9H633 154 aaKnown RBP13□□□□□ -0.33
CDK11B-201ENST00000340677 TMEM167BQ9NRX6 74 aa13□□□□□ -0.33
CDK11B-201ENST00000340677 PEMTQ9UBM1 199 aa13□□□□□ -0.33
CDK11B-201ENST00000340677 DIDO1Q9BTC0 2240 aaKnown RBP12.99□□□□□ -0.33
CDK11B-201ENST00000340677 NDUFC2-KCTD14E9PQ53 114 aa12.99□□□□□ -0.33
CDK11B-201ENST00000340677 FHL2Q14192 279 aa12.99□□□□□ -0.33
CDK11B-201ENST00000340677 OXLD1Q5BKU9 147 aa12.99□□□□□ -0.33
CDK11B-201ENST00000340677 ATMQ13315 3056 aa12.99□□□□□ -0.33
CDK11B-201ENST00000340677 RP1L1Q8IWN7 2480 aaPredicted RBP12.99□□□□□ -0.33
CDK11B-201ENST00000340677 HILS1P60008 231 aa12.99□□□□□ -0.33
CDK11B-201ENST00000340677 FAM201AQ5SY85 155 aa12.99□□□□□ -0.33
CDK11B-201ENST00000340677 NCBP2LA6PVI3 153 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms