RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 TP53TG3Q9ULZ0 132 aa11.02□□□□□ -0.65
SEC13-201ENST00000337354 DAZ2Q13117 558 aaKnown RBP11.01□□□□□ -0.65
SEC13-201ENST00000337354 NHLRC2Q8NBF2 726 aa11.01□□□□□ -0.65
SEC13-201ENST00000337354 NAGKQ9UJ70 344 aa11.01□□□□□ -0.65
SEC13-201ENST00000337354 SH2D1AO60880 128 aa11□□□□□ -0.65
SEC13-201ENST00000337354 FAM222AQ5U5X8 452 aa11□□□□□ -0.65
SEC13-201ENST00000337354 C11orf72Q8NBR9 251 aa11□□□□□ -0.65
SEC13-201ENST00000337354 MUC7Q8TAX7 377 aa11□□□□□ -0.65
SEC13-201ENST00000337354 GSN-AS1Q9NRJ2 163 aa11□□□□□ -0.65
SEC13-201ENST00000337354 TRBV20OR9-2A0A075B6H5 130 aa10.99□□□□□ -0.65
SEC13-201ENST00000337354 GNRH2O43555 120 aa10.99□□□□□ -0.65
SEC13-201ENST00000337354 IGLV2-8P01709 118 aa10.99□□□□□ -0.65
SEC13-201ENST00000337354 ORM1P02763 201 aa10.99□□□□□ -0.65
SEC13-201ENST00000337354 CEBPGP53567 150 aa10.99□□□□□ -0.65
SEC13-201ENST00000337354 TCL1AP56279 114 aa10.99□□□□□ -0.65
SEC13-201ENST00000337354 ZNF415Q09FC8 603 aa10.99□□□□□ -0.65
SEC13-201ENST00000337354 FAM74A3Q4VXF1 159 aa10.99□□□□□ -0.65
SEC13-201ENST00000337354 NOP10Q9NPE3 64 aaKnown RBP10.99□□□□□ -0.65
SEC13-201ENST00000337354 C11orf21Q9P2W6 132 aa10.99□□□□□ -0.65
SEC13-201ENST00000337354 LY96Q9Y6Y9 160 aa10.99□□□□□ -0.65
SEC13-201ENST00000337354 IGKV3D-20A0A0C4DH25 116 aa10.98□□□□□ -0.65
SEC13-201ENST00000337354 TYMSP04818 313 aa10.98□□□□□ -0.65
SEC13-201ENST00000337354 SRSF3P84103 164 aaKnown RBP10.98□□□□□ -0.65
SEC13-201ENST00000337354 DAZAP1Q96EP5 407 aaKnown RBP10.98□□□□□ -0.65
SEC13-201ENST00000337354 SPXQ9BT56 116 aa10.98□□□□□ -0.65
SEC13-201ENST00000337354 MDFICQ9P1T7 246 aa10.98□□□□□ -0.65
SEC13-201ENST00000337354 IGHV3-16A0A0C4DH30 117 aa10.97□□□□□ -0.65
SEC13-201ENST00000337354 ZNF727A8MUV8 499 aa10.97□□□□□ -0.65
SEC13-201ENST00000337354 KRBOX1C9JBD0 128 aa10.97□□□□□ -0.65
SEC13-201ENST00000337354 C3orf84H3BNL1 204 aa10.97□□□□□ -0.65
SEC13-201ENST00000337354 MGST1P10620 155 aaKnown RBP10.97□□□□□ -0.65
SEC13-201ENST00000337354 NANOS2P60321 138 aaKnown RBP10.97□□□□□ -0.65
SEC13-201ENST00000337354 LGALS9BQ3B8N2 356 aa10.97□□□□□ -0.65
SEC13-201ENST00000337354 LINC01559Q495D7 138 aa10.97□□□□□ -0.65
SEC13-201ENST00000337354 OCC1Q8TAD7 63 aa10.97□□□□□ -0.65
SEC13-201ENST00000337354 SMIM7Q9BQ49 75 aa10.97□□□□□ -0.65
SEC13-201ENST00000337354 CELA1Q9UNI1 258 aa10.97□□□□□ -0.65
SEC13-201ENST00000337354 B4DEV8 164 aa10.96□□□□□ -0.65
SEC13-201ENST00000337354 C9JQL5 133 aa10.96□□□□□ -0.65
SEC13-201ENST00000337354 C12orf74Q32Q52 190 aa10.96□□□□□ -0.65
SEC13-201ENST00000337354 DNLZQ5SXM8 178 aa10.96□□□□□ -0.65
SEC13-201ENST00000337354 ZFAND6Q6FIF0 208 aa10.96□□□□□ -0.65
SEC13-201ENST00000337354 PRR27Q6MZM9 219 aa10.96□□□□□ -0.65
SEC13-201ENST00000337354 SPINK4O60575 86 aa10.95□□□□□ -0.66
SEC13-201ENST00000337354 DAD1P61803 113 aa10.95□□□□□ -0.66
SEC13-201ENST00000337354 LINC00612Q8N6U2 182 aa10.95□□□□□ -0.66
SEC13-201ENST00000337354 C19orf71A6NCJ1 209 aa10.94□□□□□ -0.66
SEC13-201ENST00000337354 PGPEP1LA6NFU8 196 aa10.94□□□□□ -0.66
SEC13-201ENST00000337354 M0R036 132 aa10.94□□□□□ -0.66
SEC13-201ENST00000337354 DEFB130BP0DP73 79 aa10.94□□□□□ -0.66
SEC13-201ENST00000337354 DEFB130AP0DP74 79 aa10.94□□□□□ -0.66
SEC13-201ENST00000337354 S100A4P26447 101 aaKnown RBP10.94□□□□□ -0.66
SEC13-201ENST00000337354 ASIPP42127 132 aa10.94□□□□□ -0.66
SEC13-201ENST00000337354 OR5I1Q13606 314 aa10.94□□□□□ -0.66
SEC13-201ENST00000337354 TMEM241Q24JQ0 296 aa10.94□□□□□ -0.66
SEC13-201ENST00000337354 SOHLH1Q5JUK2 328 aa10.94□□□□□ -0.66
SEC13-201ENST00000337354 UQCC3Q6UW78 93 aa10.94□□□□□ -0.66
SEC13-201ENST00000337354 C18orf15Q96N68 181 aa10.94□□□□□ -0.66
SEC13-201ENST00000337354 CXCL1P09341 107 aa10.93□□□□□ -0.66
SEC13-201ENST00000337354 Q6ZTC4 211 aa10.93□□□□□ -0.66
SEC13-201ENST00000337354 RASL10AQ92737 203 aa10.93□□□□□ -0.66
SEC13-201ENST00000337354 PTH2Q96A98 100 aa10.93□□□□□ -0.66
SEC13-201ENST00000337354 IL36BQ9NZH7 164 aa10.93□□□□□ -0.66
SEC13-201ENST00000337354 TRGV1A0A0A0MS02 117 aa10.92□□□□□ -0.66
SEC13-201ENST00000337354 TRAV10A0A0B4J240 114 aa10.92□□□□□ -0.66
SEC13-201ENST00000337354 M0R2P5 195 aa10.92□□□□□ -0.66
SEC13-201ENST00000337354 P01737 135 aa10.92□□□□□ -0.66
SEC13-201ENST00000337354 RNASE3P12724 160 aaKnown RBP10.92□□□□□ -0.66
SEC13-201ENST00000337354 RPS20P60866 119 aaKnown RBP10.92□□□□□ -0.66
SEC13-201ENST00000337354 LINC01551Q86U37 167 aa10.92□□□□□ -0.66
SEC13-201ENST00000337354 ZNF575Q86XF7 245 aa10.92□□□□□ -0.66
SEC13-201ENST00000337354 PHLDA1Q8WV24 401 aaPredicted RBP10.92□□□□□ -0.66
SEC13-201ENST00000337354 C9orf85Q96MD7 179 aa10.92□□□□□ -0.66
SEC13-201ENST00000337354 NDUFAF3Q9BU61 184 aa10.92□□□□□ -0.66
SEC13-201ENST00000337354 GAGE12BA1L429 117 aa10.91□□□□□ -0.66
SEC13-201ENST00000337354 XKRY2A2RUG3 117 aa10.91□□□□□ -0.66
SEC13-201ENST00000337354 NUPR2A6NF83 97 aa10.91□□□□□ -0.66
SEC13-201ENST00000337354 K7EN84 100 aa10.91□□□□□ -0.66
SEC13-201ENST00000337354 GAGE7O76087 117 aa10.91□□□□□ -0.66
SEC13-201ENST00000337354 GAGE12FP0CL80 117 aa10.91□□□□□ -0.66
SEC13-201ENST00000337354 GAGE12GP0CL81 117 aa10.91□□□□□ -0.66
SEC13-201ENST00000337354 GAGE12IP0CL82 117 aa10.91□□□□□ -0.66
SEC13-201ENST00000337354 Q6ZTI0 123 aa10.91□□□□□ -0.66
SEC13-201ENST00000337354 FAM231DQ6ZW35 169 aa10.91□□□□□ -0.66
SEC13-201ENST00000337354 NUDT10Q8NFP7 164 aa10.91□□□□□ -0.66
SEC13-201ENST00000337354 NUDT11Q96G61 164 aa10.91□□□□□ -0.66
SEC13-201ENST00000337354 NAT8Q9UHE5 227 aa10.91□□□□□ -0.66
SEC13-201ENST00000337354 TRGV2A0A075B6R0 118 aa10.9□□□□□ -0.66
SEC13-201ENST00000337354 TMSB15BA0A087X1C1 80 aa10.9□□□□□ -0.66
SEC13-201ENST00000337354 GRIFINA4D1Z8 144 aa10.9□□□□□ -0.66
SEC13-201ENST00000337354 LINC00862A6NCI5 91 aa10.9□□□□□ -0.66
SEC13-201ENST00000337354 ATP5G1P05496 136 aa10.9□□□□□ -0.66
SEC13-201ENST00000337354 ARMS2P0C7Q2 107 aa10.9□□□□□ -0.66
SEC13-201ENST00000337354 MED14OSP0DP75 135 aa10.9□□□□□ -0.66
SEC13-201ENST00000337354 PIK3CD-AS1Q5SR53 167 aa10.9□□□□□ -0.66
SEC13-201ENST00000337354 CASC10Q5T4H9 136 aa10.9□□□□□ -0.66
SEC13-201ENST00000337354 CEMP1Q6PRD7 247 aaPredicted RBP10.9□□□□□ -0.66
SEC13-201ENST00000337354 OR2D3Q8NGH3 330 aa10.9□□□□□ -0.66
SEC13-201ENST00000337354 DEFB131BA0A096LNP1 70 aa10.9□□□□□ -0.67
SEC13-201ENST00000337354 SFTA3P0C7M3 94 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms