RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 KCNS1Q96KK3 526 aa10.11□□□□□ -0.79
APOBEC3B-202ENST00000335760 SDF2L1Q9HCN8 221 aa10.11□□□□□ -0.79
APOBEC3B-202ENST00000335760 PLAC8L1A1L4L8 177 aa10.1□□□□□ -0.79
APOBEC3B-202ENST00000335760 GNRH2O43555 120 aa10.1□□□□□ -0.79
APOBEC3B-202ENST00000335760 ORM1P02763 201 aa10.1□□□□□ -0.79
APOBEC3B-202ENST00000335760 TDRG1Q3Y452 100 aa10.1□□□□□ -0.79
APOBEC3B-202ENST00000335760 OCC1Q8TAD7 63 aa10.1□□□□□ -0.79
APOBEC3B-202ENST00000335760 GSN-AS1Q9NRJ2 163 aa10.1□□□□□ -0.79
APOBEC3B-202ENST00000335760 TRGV11A0A075B6L2 103 aa10.09□□□□□ -0.79
APOBEC3B-202ENST00000335760 IGKV3D-20A0A0C4DH25 116 aa10.09□□□□□ -0.79
APOBEC3B-202ENST00000335760 SNURFLB1AK76 121 aa10.09□□□□□ -0.79
APOBEC3B-202ENST00000335760 M0R036 132 aa10.09□□□□□ -0.79
APOBEC3B-202ENST00000335760 TYMSP04818 313 aa10.09□□□□□ -0.79
APOBEC3B-202ENST00000335760 OR5I1Q13606 314 aa10.09□□□□□ -0.79
APOBEC3B-202ENST00000335760 FAM74A3Q4VXF1 159 aa10.09□□□□□ -0.79
APOBEC3B-202ENST00000335760 COMMD7Q86VX2 200 aa10.09□□□□□ -0.79
APOBEC3B-202ENST00000335760 C11orf72Q8NBR9 251 aa10.09□□□□□ -0.79
APOBEC3B-202ENST00000335760 BIN3Q9NQY0 253 aa10.09□□□□□ -0.79
APOBEC3B-202ENST00000335760 CELA1Q9UNI1 258 aa10.09□□□□□ -0.79
APOBEC3B-202ENST00000335760 TGP01266 2768 aa10.08□□□□□ -0.8
APOBEC3B-202ENST00000335760 TMSB15BA0A087X1C1 80 aa10.08□□□□□ -0.8
APOBEC3B-202ENST00000335760 LINC00862A6NCI5 91 aa10.08□□□□□ -0.8
APOBEC3B-202ENST00000335760 B4DEV8 164 aa10.08□□□□□ -0.8
APOBEC3B-202ENST00000335760 K7EN84 100 aa10.08□□□□□ -0.8
APOBEC3B-202ENST00000335760 ZNF415Q09FC8 603 aa10.08□□□□□ -0.8
APOBEC3B-202ENST00000335760 SOHLH1Q5JUK2 328 aa10.08□□□□□ -0.8
APOBEC3B-202ENST00000335760 IBA57Q5T440 356 aaKnown RBP10.08□□□□□ -0.8
APOBEC3B-202ENST00000335760 FAM222AQ5U5X8 452 aa10.08□□□□□ -0.8
APOBEC3B-202ENST00000335760 C11orf45Q8TAV5 145 aa10.08□□□□□ -0.8
APOBEC3B-202ENST00000335760 DAZAP1Q96EP5 407 aaKnown RBP10.08□□□□□ -0.8
APOBEC3B-202ENST00000335760 NOP10Q9NPE3 64 aaKnown RBP10.08□□□□□ -0.8
APOBEC3B-202ENST00000335760 MDFICQ9P1T7 246 aa10.08□□□□□ -0.8
APOBEC3B-202ENST00000335760 TIMM8BQ9Y5J9 83 aaPredicted RBP10.08□□□□□ -0.8
APOBEC3B-202ENST00000335760 LY96Q9Y6Y9 160 aa10.08□□□□□ -0.8
APOBEC3B-202ENST00000335760 IGHV3-16A0A0C4DH30 117 aa10.07□□□□□ -0.8
APOBEC3B-202ENST00000335760 CXorf65A6NEN9 183 aa10.07□□□□□ -0.8
APOBEC3B-202ENST00000335760 KRBOX1C9JBD0 128 aa10.07□□□□□ -0.8
APOBEC3B-202ENST00000335760 SPART-AS1P0CW21 52 aa10.07□□□□□ -0.8
APOBEC3B-202ENST00000335760 LINC01559Q495D7 138 aa10.07□□□□□ -0.8
APOBEC3B-202ENST00000335760 DKK2Q9UBU2 259 aa10.07□□□□□ -0.8
APOBEC3B-202ENST00000335760 GRIFINA4D1Z8 144 aa10.06□□□□□ -0.8
APOBEC3B-202ENST00000335760 C19orf71A6NCJ1 209 aa10.06□□□□□ -0.8
APOBEC3B-202ENST00000335760 SFTA3P0C7M3 94 aa10.06□□□□□ -0.8
APOBEC3B-202ENST00000335760 TCL1AP56279 114 aa10.06□□□□□ -0.8
APOBEC3B-202ENST00000335760 NANOS2P60321 138 aaKnown RBP10.06□□□□□ -0.8
APOBEC3B-202ENST00000335760 RPL19P84098 196 aaKnown RBP10.06□□□□□ -0.8
APOBEC3B-202ENST00000335760 TMEM241Q24JQ0 296 aa10.06□□□□□ -0.8
APOBEC3B-202ENST00000335760 UQCC3Q6UW78 93 aa10.06□□□□□ -0.8
APOBEC3B-202ENST00000335760 IL17DQ8TAD2 202 aa10.06□□□□□ -0.8
APOBEC3B-202ENST00000335760 TEX48A0A1B0GUV7 120 aa10.05□□□□□ -0.8
APOBEC3B-202ENST00000335760 LYRM9A8MSI8 78 aa10.05□□□□□ -0.8
APOBEC3B-202ENST00000335760 DAZ2Q13117 558 aaKnown RBP10.05□□□□□ -0.8
APOBEC3B-202ENST00000335760 LINC01551Q86U37 167 aa10.05□□□□□ -0.8
APOBEC3B-202ENST00000335760 WWC2-AS2Q96NR7 200 aa10.05□□□□□ -0.8
APOBEC3B-202ENST00000335760 NAT8Q9UHE5 227 aa10.05□□□□□ -0.8
APOBEC3B-202ENST00000335760 P01737 135 aa10.04□□□□□ -0.8
APOBEC3B-202ENST00000335760 S100A4P26447 101 aaKnown RBP10.04□□□□□ -0.8
APOBEC3B-202ENST00000335760 ASIPP42127 132 aa10.04□□□□□ -0.8
APOBEC3B-202ENST00000335760 C12orf74Q32Q52 190 aa10.04□□□□□ -0.8
APOBEC3B-202ENST00000335760 NUDT10Q8NFP7 164 aa10.04□□□□□ -0.8
APOBEC3B-202ENST00000335760 NUDT11Q96G61 164 aa10.04□□□□□ -0.8
APOBEC3B-202ENST00000335760 RNASE7Q9H1E1 156 aaKnown RBP10.04□□□□□ -0.8
APOBEC3B-202ENST00000335760 TRGV1A0A0A0MS02 117 aa10.03□□□□□ -0.8
APOBEC3B-202ENST00000335760 DEFB130BP0DP73 79 aa10.03□□□□□ -0.8
APOBEC3B-202ENST00000335760 DEFB130AP0DP74 79 aa10.03□□□□□ -0.8
APOBEC3B-202ENST00000335760 DAD1P61803 113 aa10.03□□□□□ -0.8
APOBEC3B-202ENST00000335760 RPL23P62829 140 aaKnown RBP10.03□□□□□ -0.8
APOBEC3B-202ENST00000335760 ZNF575Q86XF7 245 aa10.03□□□□□ -0.8
APOBEC3B-202ENST00000335760 OR2D3Q8NGH3 330 aa10.03□□□□□ -0.8
APOBEC3B-202ENST00000335760 SPXQ9BT56 116 aa10.03□□□□□ -0.8
APOBEC3B-202ENST00000335760 GAGE12BA1L429 117 aa10.02□□□□□ -0.8
APOBEC3B-202ENST00000335760 SPINK4O60575 86 aa10.02□□□□□ -0.8
APOBEC3B-202ENST00000335760 GAGE7O76087 117 aa10.02□□□□□ -0.8
APOBEC3B-202ENST00000335760 GAGE12FP0CL80 117 aa10.02□□□□□ -0.8
APOBEC3B-202ENST00000335760 GAGE12GP0CL81 117 aa10.02□□□□□ -0.8
APOBEC3B-202ENST00000335760 GAGE12IP0CL82 117 aa10.02□□□□□ -0.8
APOBEC3B-202ENST00000335760 RNASE3P12724 160 aaKnown RBP10.02□□□□□ -0.8
APOBEC3B-202ENST00000335760 ADIRFQ15847 76 aa10.02□□□□□ -0.8
APOBEC3B-202ENST00000335760 DNLZQ5SXM8 178 aa10.02□□□□□ -0.8
APOBEC3B-202ENST00000335760 Q6ZTI0 123 aa10.02□□□□□ -0.8
APOBEC3B-202ENST00000335760 C9orf85Q96MD7 179 aa10.02□□□□□ -0.8
APOBEC3B-202ENST00000335760 MRPL16Q9NX20 251 aaKnown RBP10.02□□□□□ -0.8
APOBEC3B-202ENST00000335760 STAB2Q8WWQ8 2551 aa10.02□□□□□ -0.8
APOBEC3B-202ENST00000335760 TMEM218A2RU14 115 aa10.01□□□□□ -0.81
APOBEC3B-202ENST00000335760 H3BVH4 76 aa10.01□□□□□ -0.81
APOBEC3B-202ENST00000335760 GATCO43716 136 aaKnown RBP10.01□□□□□ -0.81
APOBEC3B-202ENST00000335760 ERVFC1-1P60608 527 aa10.01□□□□□ -0.81
APOBEC3B-202ENST00000335760 RPS20P60866 119 aaKnown RBP10.01□□□□□ -0.81
APOBEC3B-202ENST00000335760 Q6ZTC4 211 aa10.01□□□□□ -0.81
APOBEC3B-202ENST00000335760 FAM231DQ6ZW35 169 aa10.01□□□□□ -0.81
APOBEC3B-202ENST00000335760 RPP21Q9H633 154 aaKnown RBP10.01□□□□□ -0.81
APOBEC3B-202ENST00000335760 IL36BQ9NZH7 164 aa10.01□□□□□ -0.81
APOBEC3B-202ENST00000335760 DNAH7Q8WXX0 4024 aa10.01□□□□□ -0.81
APOBEC3B-202ENST00000335760 M0R2P5 195 aa10.01□□□□□ -0.81
APOBEC3B-202ENST00000335760 CXCL1P09341 107 aa10.01□□□□□ -0.81
APOBEC3B-202ENST00000335760 ARMS2P0C7Q2 107 aa10.01□□□□□ -0.81
APOBEC3B-202ENST00000335760 GZMBP10144 247 aa10.01□□□□□ -0.81
APOBEC3B-202ENST00000335760 LGALS9BQ3B8N2 356 aa10.01□□□□□ -0.81
APOBEC3B-202ENST00000335760 LINC00612Q8N6U2 182 aa10.01□□□□□ -0.81
APOBEC3B-202ENST00000335760 ISOC2Q96AB3 205 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms