RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 K7EIM0 57 aa8.59□□□□□ -1.03
CCDC87-201ENST00000333861 LGALS1P09382 135 aaKnown RBP8.59□□□□□ -1.03
CCDC87-201ENST00000333861 SCGB1C2P0DMR2 95 aa8.59□□□□□ -1.03
CCDC87-201ENST00000333861 IGHV1-8P0DP01 117 aa8.59□□□□□ -1.03
CCDC87-201ENST00000333861 GFRALQ6UXV0 394 aa8.59□□□□□ -1.03
CCDC87-201ENST00000333861 DYNAPQ8N1N2 210 aa8.59□□□□□ -1.03
CCDC87-201ENST00000333861 CFHR4Q92496 578 aa8.59□□□□□ -1.03
CCDC87-201ENST00000333861 RAX2Q96IS3 184 aa8.59□□□□□ -1.03
CCDC87-201ENST00000333861 C11orf21Q9P2W6 132 aa8.59□□□□□ -1.03
CCDC87-201ENST00000333861 IGLV3-9A0A075B6K5 115 aa8.59□□□□□ -1.03
CCDC87-201ENST00000333861 MYMXA0A1B0GTQ4 84 aa8.59□□□□□ -1.03
CCDC87-201ENST00000333861 TNFRSF13BO14836 293 aaPredicted RBP8.59□□□□□ -1.03
CCDC87-201ENST00000333861 BRI3O95415 125 aa8.59□□□□□ -1.03
CCDC87-201ENST00000333861 PRR25Q96S07 402 aa8.59□□□□□ -1.03
CCDC87-201ENST00000333861 IGHV1-3A0A0C4DH29 117 aa8.58□□□□□ -1.04
CCDC87-201ENST00000333861 SLC25A16P16260 332 aa8.58□□□□□ -1.04
CCDC87-201ENST00000333861 ADIPOQQ15848 244 aa8.58□□□□□ -1.04
CCDC87-201ENST00000333861 TMEM78Q5T7P6 136 aa8.58□□□□□ -1.04
CCDC87-201ENST00000333861 TRPT1Q86TN4 253 aaKnown RBP8.58□□□□□ -1.04
CCDC87-201ENST00000333861 AAMDCQ9H7C9 122 aa8.58□□□□□ -1.04
CCDC87-201ENST00000333861 NOTCH3Q9UM47 2321 aa8.58□□□□□ -1.04
CCDC87-201ENST00000333861 TRAV8-2A0A0B4J237 113 aa8.58□□□□□ -1.04
CCDC87-201ENST00000333861 ZNF815PA8K554 130 aa8.58□□□□□ -1.04
CCDC87-201ENST00000333861 TIMM23O14925 209 aa8.58□□□□□ -1.04
CCDC87-201ENST00000333861 SHANK2-AS3Q9BTD1 123 aa8.58□□□□□ -1.04
CCDC87-201ENST00000333861 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.58□□□□□ -1.04
CCDC87-201ENST00000333861 ITPR1Q14643 2758 aa8.58□□□□□ -1.04
CCDC87-201ENST00000333861 RPL32P62910 135 aaKnown RBP8.57□□□□□ -1.04
CCDC87-201ENST00000333861 NDPQ00604 133 aa8.57□□□□□ -1.04
CCDC87-201ENST00000333861 LINC00527Q9UJ94 153 aa8.57□□□□□ -1.04
CCDC87-201ENST00000333861 Q8NA96 180 aa8.57□□□□□ -1.04
CCDC87-201ENST00000333861 PPDPFLQ8WWR9 84 aa8.57□□□□□ -1.04
CCDC87-201ENST00000333861 PRADC1Q9BSG0 188 aa8.57□□□□□ -1.04
CCDC87-201ENST00000333861 RAB9BQ9NP90 201 aa8.57□□□□□ -1.04
CCDC87-201ENST00000333861 IGHV3-64A0A075B6Q5 118 aa8.57□□□□□ -1.04
CCDC87-201ENST00000333861 C17orf100A8MU93 164 aa8.57□□□□□ -1.04
CCDC87-201ENST00000333861 ATP5LO75964 103 aa8.57□□□□□ -1.04
CCDC87-201ENST00000333861 ZNF688P0C7X2 276 aa8.57□□□□□ -1.04
CCDC87-201ENST00000333861 TEN1Q86WV5 123 aa8.57□□□□□ -1.04
CCDC87-201ENST00000333861 DYNLRB1Q9NP97 96 aa8.57□□□□□ -1.04
CCDC87-201ENST00000333861 A0A087WX48 190 aa8.56□□□□□ -1.04
CCDC87-201ENST00000333861 H3BRN7 92 aa8.56□□□□□ -1.04
CCDC87-201ENST00000333861 HIF1ANQ9NWT6 349 aa8.56□□□□□ -1.04
CCDC87-201ENST00000333861 TMEM14CQ9P0S9 112 aa8.56□□□□□ -1.04
CCDC87-201ENST00000333861 SMAD5-AS1Q9Y6J3 95 aa8.56□□□□□ -1.04
CCDC87-201ENST00000333861 NACAE9PAV3 2078 aa8.56□□□□□ -1.04
CCDC87-201ENST00000333861 EPG5Q9HCE0 2579 aa8.56□□□□□ -1.04
CCDC87-201ENST00000333861 TMEM178BH3BS89 294 aa8.56□□□□□ -1.04
CCDC87-201ENST00000333861 FAM159AQ6UWV7 190 aa8.56□□□□□ -1.04
CCDC87-201ENST00000333861 Q6ZS46 218 aa8.56□□□□□ -1.04
CCDC87-201ENST00000333861 RPL39LQ96EH5 51 aaKnown RBP8.56□□□□□ -1.04
CCDC87-201ENST00000333861 NXT2Q9NPJ8 142 aaKnown RBP8.56□□□□□ -1.04
CCDC87-201ENST00000333861 BEX4Q9NWD9 120 aaPredicted RBP8.56□□□□□ -1.04
CCDC87-201ENST00000333861 M0R381 172 aa8.55□□□□□ -1.04
CCDC87-201ENST00000333861 IGLC6P0CF74 106 aa8.55□□□□□ -1.04
CCDC87-201ENST00000333861 UCNP55089 124 aa8.55□□□□□ -1.04
CCDC87-201ENST00000333861 SRSF1Q07955 248 aaKnown RBP eCLIP8.55□□□□□ -1.04
CCDC87-201ENST00000333861 LAGE3Q14657 143 aa8.55□□□□□ -1.04
CCDC87-201ENST00000333861 C1orf162Q8NEQ5 155 aaPredicted RBP8.55□□□□□ -1.04
CCDC87-201ENST00000333861 PIFOQ8TCI5 191 aa8.55□□□□□ -1.04
CCDC87-201ENST00000333861 DOPEY2Q9Y3R5 2298 aa8.55□□□□□ -1.04
CCDC87-201ENST00000333861 C9JAW5 83 aa8.55□□□□□ -1.04
CCDC87-201ENST00000333861 INS-IGF2F8WCM5 200 aa8.55□□□□□ -1.04
CCDC87-201ENST00000333861 LY6DQ14210 128 aa8.55□□□□□ -1.04
CCDC87-201ENST00000333861 IGLV2-18A0A075B6J9 118 aa8.54□□□□□ -1.04
CCDC87-201ENST00000333861 A8MWV9 139 aa8.54□□□□□ -1.04
CCDC87-201ENST00000333861 MRPS12O15235 138 aaKnown RBP8.54□□□□□ -1.04
CCDC87-201ENST00000333861 IGHG4P01861 327 aa8.54□□□□□ -1.04
CCDC87-201ENST00000333861 GAGE2BQ13066 116 aa8.54□□□□□ -1.04
CCDC87-201ENST00000333861 GAGE2EQ4V326 116 aa8.54□□□□□ -1.04
CCDC87-201ENST00000333861 TEX36Q5VZQ5 186 aa8.54□□□□□ -1.04
CCDC87-201ENST00000333861 Q8N8P6 123 aa8.54□□□□□ -1.04
CCDC87-201ENST00000333861 GAGE2DQ9UEU5 116 aa8.54□□□□□ -1.04
CCDC87-201ENST00000333861 SPG11Q96JI7 2443 aa8.54□□□□□ -1.04
CCDC87-201ENST00000333861 NDUFV3P56181 108 aaKnown RBP8.54□□□□□ -1.04
CCDC87-201ENST00000333861 SCGB3A1Q96QR1 104 aa8.54□□□□□ -1.04
CCDC87-201ENST00000333861 ANKHD1Q8IWZ3 2542 aaKnown RBP8.54□□□□□ -1.04
CCDC87-201ENST00000333861 ARL3P36405 182 aa8.53□□□□□ -1.04
CCDC87-201ENST00000333861 TTC32Q5I0X7 151 aa8.53□□□□□ -1.04
CCDC87-201ENST00000333861 IGKV3D-20A0A0C4DH25 116 aa8.53□□□□□ -1.04
CCDC87-201ENST00000333861 VSTM5A8MXK1 200 aa8.53□□□□□ -1.04
CCDC87-201ENST00000333861 TAL2Q16559 108 aa8.53□□□□□ -1.04
CCDC87-201ENST00000333861 GAGE12JA6NER3 117 aa8.53□□□□□ -1.04
CCDC87-201ENST00000333861 F8VRH5 84 aa8.53□□□□□ -1.04
CCDC87-201ENST00000333861 GAGE7O76087 117 aa8.53□□□□□ -1.04
CCDC87-201ENST00000333861 MGPP08493 103 aa8.53□□□□□ -1.04
CCDC87-201ENST00000333861 GAGE12FP0CL80 117 aa8.53□□□□□ -1.04
CCDC87-201ENST00000333861 GAGE12GP0CL81 117 aa8.53□□□□□ -1.04
CCDC87-201ENST00000333861 GAGE12IP0CL82 117 aa8.53□□□□□ -1.04
CCDC87-201ENST00000333861 GATA4P43694 442 aa8.53□□□□□ -1.04
CCDC87-201ENST00000333861 GAGE4Q13068 117 aa8.53□□□□□ -1.04
CCDC87-201ENST00000333861 CREBBPQ92793 2442 aa8.53□□□□□ -1.04
CCDC87-201ENST00000333861 BUB1B-PAK6H3BSN5 160 aa8.52□□□□□ -1.05
CCDC87-201ENST00000333861 SNCGO76070 127 aa8.52□□□□□ -1.05
CCDC87-201ENST00000333861 ELANEP08246 267 aa8.52□□□□□ -1.05
CCDC87-201ENST00000333861 ID1P41134 155 aa8.52□□□□□ -1.05
CCDC87-201ENST00000333861 TMEM155Q4W5P6 130 aa8.52□□□□□ -1.05
CCDC87-201ENST00000333861 SHISA9B4DS77 424 aa8.52□□□□□ -1.05
CCDC87-201ENST00000333861 IGHV4-39P01824 125 aa8.52□□□□□ -1.05
CCDC87-201ENST00000333861 DLX6P56179 175 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms