RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 FAM167A-AS1Q96KT0 104 aa12.21□□□□□ -0.46
PDGFB-201ENST00000331163 CR1P17927 2039 aa12.21□□□□□ -0.46
PDGFB-201ENST00000331163 FAM223BA6NKX1 122 aa12.2□□□□□ -0.46
PDGFB-201ENST00000331163 SYS1-DBNDD2H3BUS1 97 aa12.2□□□□□ -0.46
PDGFB-201ENST00000331163 FAM223AQ8IWN6 122 aa12.2□□□□□ -0.46
PDGFB-201ENST00000331163 TCTEX1D4Q5JR98 221 aa12.2□□□□□ -0.46
PDGFB-201ENST00000331163 TMEM75Q8N9X5 138 aa12.2□□□□□ -0.46
PDGFB-201ENST00000331163 OR1N2Q8NGR9 330 aa12.2□□□□□ -0.46
PDGFB-201ENST00000331163 MAP1LC3CQ9BXW4 147 aa12.2□□□□□ -0.46
PDGFB-201ENST00000331163 DAZ1Q9NQZ3 744 aaKnown RBP12.2□□□□□ -0.46
PDGFB-201ENST00000331163 C7orf71A4D174 169 aa12.2□□□□□ -0.46
PDGFB-201ENST00000331163 MBD6Q96DN6 1003 aa12.19□□□□□ -0.46
PDGFB-201ENST00000331163 SRSF8Q9BRL6 282 aaKnown RBP12.19□□□□□ -0.46
PDGFB-201ENST00000331163 IGHV1-24A0A0C4DH33 117 aa12.19□□□□□ -0.46
PDGFB-201ENST00000331163 H3BUT2 72 aa12.19□□□□□ -0.46
PDGFB-201ENST00000331163 RPL24P83731 157 aaKnown RBP12.19□□□□□ -0.46
PDGFB-201ENST00000331163 FOXE3Q13461 319 aa12.19□□□□□ -0.46
PDGFB-201ENST00000331163 C12orf54Q6X4T0 127 aa12.19□□□□□ -0.46
PDGFB-201ENST00000331163 ZNF702PQ9H963 129 aa12.19□□□□□ -0.46
PDGFB-201ENST00000331163 LY96Q9Y6Y9 160 aa12.19□□□□□ -0.46
PDGFB-201ENST00000331163 MRPL27Q9P0M9 148 aaKnown RBP12.19□□□□□ -0.46
PDGFB-201ENST00000331163 TCRAP04437 139 aa12.18□□□□□ -0.46
PDGFB-201ENST00000331163 VGLL1Q99990 258 aa12.18□□□□□ -0.46
PDGFB-201ENST00000331163 PRAC2D3DTV9 90 aa12.17□□□□□ -0.46
PDGFB-201ENST00000331163 HBBP68871 147 aa12.17□□□□□ -0.46
PDGFB-201ENST00000331163 OR10J6PQ8NGY7 276 aa12.17□□□□□ -0.46
PDGFB-201ENST00000331163 C8orf49Q96NF6 230 aa12.17□□□□□ -0.46
PDGFB-201ENST00000331163 TRBV19A0A075B6N1 114 aa12.16□□□□□ -0.46
PDGFB-201ENST00000331163 FAM231BA6NCW3 169 aa12.16□□□□□ -0.46
PDGFB-201ENST00000331163 OR5AL1P0C617 328 aa12.16□□□□□ -0.46
PDGFB-201ENST00000331163 IGF2BP2-AS1Q96M15 143 aa12.16□□□□□ -0.46
PDGFB-201ENST00000331163 PSG8Q9UQ74 426 aa12.16□□□□□ -0.46
PDGFB-201ENST00000331163 UFC1Q9Y3C8 167 aa12.16□□□□□ -0.46
PDGFB-201ENST00000331163 TRAV12-2A0A075B6T6 113 aa12.16□□□□□ -0.46
PDGFB-201ENST00000331163 H3BRN7 92 aa12.16□□□□□ -0.46
PDGFB-201ENST00000331163 RNASE4P34096 147 aaKnown RBP12.16□□□□□ -0.46
PDGFB-201ENST00000331163 PRSS3P2Q8NHM4 247 aa12.16□□□□□ -0.46
PDGFB-201ENST00000331163 ZNF469Q96JG9 3925 aaPredicted RBP12.16□□□□□ -0.46
PDGFB-201ENST00000331163 FNDC10F2Z333 226 aa12.16□□□□□ -0.46
PDGFB-201ENST00000331163 JMJD8Q96S16 334 aa12.16□□□□□ -0.46
PDGFB-201ENST00000331163 F8W735 103 aaPredicted RBP12.15□□□□□ -0.46
PDGFB-201ENST00000331163 LINC01006Q8NI28 216 aa12.15□□□□□ -0.46
PDGFB-201ENST00000331163 ST20Q9HBF5 79 aa12.15□□□□□ -0.46
PDGFB-201ENST00000331163 URB1-AS1Q96HZ7 61 aa12.15□□□□□ -0.46
PDGFB-201ENST00000331163 IGF1P05019 195 aa12.14□□□□□ -0.47
PDGFB-201ENST00000331163 DEFB131AP59861 70 aa12.14□□□□□ -0.47
PDGFB-201ENST00000331163 LINC00322Q6ZN03 302 aaPredicted RBP12.14□□□□□ -0.47
PDGFB-201ENST00000331163 DLX4Q92988 240 aaPredicted RBP12.14□□□□□ -0.47
PDGFB-201ENST00000331163 CSTL1Q9H114 145 aa12.14□□□□□ -0.47
PDGFB-201ENST00000331163 BUB3O43684 328 aa12.14□□□□□ -0.47
PDGFB-201ENST00000331163 GP9P14770 177 aa12.14□□□□□ -0.47
PDGFB-201ENST00000331163 NMUP48645 174 aa12.14□□□□□ -0.47
PDGFB-201ENST00000331163 EMP1P54849 157 aa12.14□□□□□ -0.47
PDGFB-201ENST00000331163 APRG1Q8IVJ8 170 aa12.14□□□□□ -0.47
PDGFB-201ENST00000331163 DEFB125Q8N687 156 aa12.14□□□□□ -0.47
PDGFB-201ENST00000331163 ZNF414Q96IQ9 312 aa12.14□□□□□ -0.47
PDGFB-201ENST00000331163 OTORQ9NRC9 128 aa12.14□□□□□ -0.47
PDGFB-201ENST00000331163 KNCNA6PVL3 124 aa12.13□□□□□ -0.47
PDGFB-201ENST00000331163 CCL24O00175 119 aa12.13□□□□□ -0.47
PDGFB-201ENST00000331163 FA2HQ7L5A8 372 aa12.13□□□□□ -0.47
PDGFB-201ENST00000331163 C3orf56Q8N813 242 aa12.13□□□□□ -0.47
PDGFB-201ENST00000331163 GPR82Q96P67 336 aa12.13□□□□□ -0.47
PDGFB-201ENST00000331163 TMEM238C9JI98 176 aa12.13□□□□□ -0.47
PDGFB-201ENST00000331163 A8MWL6 223 aa12.13□□□□□ -0.47
PDGFB-201ENST00000331163 RPL35AP18077 110 aaKnown RBP12.13□□□□□ -0.47
PDGFB-201ENST00000331163 SNRPD3P62318 126 aaKnown RBP12.13□□□□□ -0.47
PDGFB-201ENST00000331163 UBE2E2Q96LR5 201 aa12.13□□□□□ -0.47
PDGFB-201ENST00000331163 INS-IGF2F8WCM5 200 aa12.12□□□□□ -0.47
PDGFB-201ENST00000331163 LINC01619G3V211 115 aa12.12□□□□□ -0.47
PDGFB-201ENST00000331163 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.12□□□□□ -0.47
PDGFB-201ENST00000331163 WIPF2Q8TF74 440 aaPredicted RBP12.12□□□□□ -0.47
PDGFB-201ENST00000331163 IGHG4P01861 327 aa12.12□□□□□ -0.47
PDGFB-201ENST00000331163 ELANEP08246 267 aa12.12□□□□□ -0.47
PDGFB-201ENST00000331163 ID1P41134 155 aa12.12□□□□□ -0.47
PDGFB-201ENST00000331163 RPP21Q9H633 154 aaKnown RBP12.12□□□□□ -0.47
PDGFB-201ENST00000331163 BMI1P35226 326 aa12.12□□□□□ -0.47
PDGFB-201ENST00000331163 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.11□□□□□ -0.47
PDGFB-201ENST00000331163 NDUFA4O00483 81 aa12.11□□□□□ -0.47
PDGFB-201ENST00000331163 LGALS1P09382 135 aaKnown RBP12.11□□□□□ -0.47
PDGFB-201ENST00000331163 TRAV12-3A0A0B4J271 114 aa12.1□□□□□ -0.47
PDGFB-201ENST00000331163 K7EMI3 77 aa12.1□□□□□ -0.47
PDGFB-201ENST00000331163 M0R381 172 aa12.1□□□□□ -0.47
PDGFB-201ENST00000331163 NCR2O95944 276 aa12.1□□□□□ -0.47
PDGFB-201ENST00000331163 PPBPP02775 128 aa12.1□□□□□ -0.47
PDGFB-201ENST00000331163 SPINK13Q1W4C9 94 aa12.1□□□□□ -0.47
PDGFB-201ENST00000331163 TMEM97Q5BJF2 176 aa12.1□□□□□ -0.47
PDGFB-201ENST00000331163 GTSF1Q8WW33 167 aa12.1□□□□□ -0.47
PDGFB-201ENST00000331163 TMEM189A5PLL7 270 aa12.1□□□□□ -0.47
PDGFB-201ENST00000331163 PSMB8P28062 276 aa12.1□□□□□ -0.47
PDGFB-201ENST00000331163 FER1L6-AS1Q8NA97 138 aa12.1□□□□□ -0.47
PDGFB-201ENST00000331163 AP5S1Q9NUS5 200 aa12.1□□□□□ -0.47
PDGFB-201ENST00000331163 IGHV7-4-1A0A0J9YVY3 117 aa12.1□□□□□ -0.47
PDGFB-201ENST00000331163 CLUHP3Q96NS8 147 aa12.1□□□□□ -0.47
PDGFB-201ENST00000331163 CYSRT1A8MQ03 144 aa12.09□□□□□ -0.47
PDGFB-201ENST00000331163 F5H697 171 aa12.09□□□□□ -0.47
PDGFB-201ENST00000331163 KIR3DS1Q14943 382 aa12.09□□□□□ -0.47
PDGFB-201ENST00000331163 HSPB8Q9UJY1 196 aa12.09□□□□□ -0.47
PDGFB-201ENST00000331163 GTF2H5Q6ZYL4 71 aa12.09□□□□□ -0.47
PDGFB-201ENST00000331163 SMPXQ9UHP9 88 aa12.09□□□□□ -0.47
PDGFB-201ENST00000331163 FAM74A4Q5TZK3 123 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms