RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 A0A0J9YY99 117 aa8.03□□□□□ -1.12
CHD3-201ENST00000330494 J3QLI3 93 aa8.03□□□□□ -1.12
CHD3-201ENST00000330494 TMEM126AQ9H061 195 aa8.03□□□□□ -1.12
CHD3-201ENST00000330494 IGHV7-4-1A0A0J9YVY3 117 aa8.02□□□□□ -1.12
CHD3-201ENST00000330494 A0A1W2PPM0 123 aa8.02□□□□□ -1.13
CHD3-201ENST00000330494 K7ERJ3 54 aa8.02□□□□□ -1.13
CHD3-201ENST00000330494 CCL24O00175 119 aa8.02□□□□□ -1.13
CHD3-201ENST00000330494 PMVKQ15126 192 aa8.02□□□□□ -1.13
CHD3-201ENST00000330494 SEM1Q6ZVN7 128 aa8.02□□□□□ -1.13
CHD3-201ENST00000330494 CGB7P0DN87 165 aa8.02□□□□□ -1.13
CHD3-201ENST00000330494 PRR14LQ5THK1 2151 aa8.02□□□□□ -1.13
CHD3-201ENST00000330494 PRSS46E5RG02 174 aa8.02□□□□□ -1.13
CHD3-201ENST00000330494 H3BMG7 143 aa8.02□□□□□ -1.13
CHD3-201ENST00000330494 IGFL2Q6UWQ7 119 aa8.02□□□□□ -1.13
CHD3-201ENST00000330494 HOXD3P31249 432 aaPredicted RBP8.02□□□□□ -1.13
CHD3-201ENST00000330494 DYNAPQ8N1N2 210 aa8.02□□□□□ -1.13
CHD3-201ENST00000330494 NOP10Q9NPE3 64 aaKnown RBP8.01□□□□□ -1.13
CHD3-201ENST00000330494 VPREB3Q9UKI3 123 aa8.01□□□□□ -1.13
CHD3-201ENST00000330494 CENPVL3A0A0U1RRI6 287 aa8.01□□□□□ -1.13
CHD3-201ENST00000330494 IGLC7A0M8Q6 106 aa8.01□□□□□ -1.13
CHD3-201ENST00000330494 C18orf32Q8TCD1 76 aa8.01□□□□□ -1.13
CHD3-201ENST00000330494 GFRA4Q9GZZ7 299 aa8.01□□□□□ -1.13
CHD3-201ENST00000330494 LINC01559Q495D7 138 aa8.01□□□□□ -1.13
CHD3-201ENST00000330494 ZNF491Q8N8L2 437 aa8.01□□□□□ -1.13
CHD3-201ENST00000330494 V9GYV3 84 aa8.01□□□□□ -1.13
CHD3-201ENST00000330494 TRBV25-1A0A075B6N4 114 aa8.01□□□□□ -1.13
CHD3-201ENST00000330494 FAM104BQ5XKR9 115 aa8.01□□□□□ -1.13
CHD3-201ENST00000330494 LEPROTO15243 131 aa8.01□□□□□ -1.13
CHD3-201ENST00000330494 BVES-AS1Q5T3Y7 98 aa8.01□□□□□ -1.13
CHD3-201ENST00000330494 BDP1A6H8Y1 2624 aa8□□□□□ -1.13
CHD3-201ENST00000330494 I3L3M4 83 aa8□□□□□ -1.13
CHD3-201ENST00000330494 Q0VG73 95 aa8□□□□□ -1.13
CHD3-201ENST00000330494 MORN5Q5VZ52 161 aa8□□□□□ -1.13
CHD3-201ENST00000330494 KAAG1Q9UBP8 84 aa8□□□□□ -1.13
CHD3-201ENST00000330494 CCL25O15444 150 aa8□□□□□ -1.13
CHD3-201ENST00000330494 NXPH4O95158 308 aa8□□□□□ -1.13
CHD3-201ENST00000330494 IGLL1P15814 213 aa8□□□□□ -1.13
CHD3-201ENST00000330494 LY6G5BQ8NDX9 201 aa8□□□□□ -1.13
CHD3-201ENST00000330494 SDHAF1A6NFY7 115 aa8□□□□□ -1.13
CHD3-201ENST00000330494 RS1O15537 224 aa8□□□□□ -1.13
CHD3-201ENST00000330494 THAP8Q8NA92 274 aa8□□□□□ -1.13
CHD3-201ENST00000330494 FAM208BQ5VWN6 2430 aa8□□□□□ -1.13
CHD3-201ENST00000330494 LINC01549A6NIU2 74 aa7.99□□□□□ -1.13
CHD3-201ENST00000330494 K7EN84 100 aa7.99□□□□□ -1.13
CHD3-201ENST00000330494 C2orf66Q6UXQ4 117 aa7.99□□□□□ -1.13
CHD3-201ENST00000330494 ZNF492Q9P255 531 aa7.99□□□□□ -1.13
CHD3-201ENST00000330494 APOC4P55056 127 aa7.99□□□□□ -1.13
CHD3-201ENST00000330494 MYMXA0A1B0GTQ4 84 aa7.99□□□□□ -1.13
CHD3-201ENST00000330494 HLA-DRB4P13762 266 aa7.99□□□□□ -1.13
CHD3-201ENST00000330494 CFHR4Q92496 578 aa7.99□□□□□ -1.13
CHD3-201ENST00000330494 HLA-DRB4X5D2U9 266 aa7.99□□□□□ -1.13
CHD3-201ENST00000330494 IGHV1-24A0A0C4DH33 117 aa7.99□□□□□ -1.13
CHD3-201ENST00000330494 ZNF561-AS1K7EIQ3 104 aa7.99□□□□□ -1.13
CHD3-201ENST00000330494 TNCP24821 2201 aa7.99□□□□□ -1.13
CHD3-201ENST00000330494 AMTNQ6UX39 209 aa7.99□□□□□ -1.13
CHD3-201ENST00000330494 SMIM27A0A1W2PRY6 76 aa7.98□□□□□ -1.13
CHD3-201ENST00000330494 ZFP36P26651 326 aaKnown RBP7.98□□□□□ -1.13
CHD3-201ENST00000330494 NPYP01303 97 aa7.98□□□□□ -1.13
CHD3-201ENST00000330494 ESM1Q9NQ30 184 aa7.98□□□□□ -1.13
CHD3-201ENST00000330494 Q6ZQT7 251 aa7.98□□□□□ -1.13
CHD3-201ENST00000330494 PTPRQQ9UMZ3 2332 aa7.98□□□□□ -1.13
CHD3-201ENST00000330494 RBM3P98179 157 aaKnown RBP7.98□□□□□ -1.13
CHD3-201ENST00000330494 SIGLEC8Q9NYZ4 499 aa7.98□□□□□ -1.13
CHD3-201ENST00000330494 DSCAMO60469 2012 aa7.98□□□□□ -1.13
CHD3-201ENST00000330494 ANGP03950 147 aaKnown RBP7.98□□□□□ -1.13
CHD3-201ENST00000330494 WIPF2Q8TF74 440 aaPredicted RBP7.98□□□□□ -1.13
CHD3-201ENST00000330494 DNAJC30Q96LL9 226 aa7.98□□□□□ -1.13
CHD3-201ENST00000330494 TMEM243Q9BU79 118 aa7.98□□□□□ -1.13
CHD3-201ENST00000330494 ALPK3Q96L96 1907 aa7.97□□□□□ -1.13
CHD3-201ENST00000330494 IGHV7-81A0A0B4J1V7 117 aa7.97□□□□□ -1.13
CHD3-201ENST00000330494 RNASE8Q8TDE3 154 aaKnown RBP7.97□□□□□ -1.13
CHD3-201ENST00000330494 OVOL2Q9BRP0 275 aa7.97□□□□□ -1.13
CHD3-201ENST00000330494 TMEM14CQ9P0S9 112 aa7.97□□□□□ -1.13
CHD3-201ENST00000330494 PRSS47A8MTI9 375 aa7.97□□□□□ -1.13
CHD3-201ENST00000330494 EGR2P11161 476 aaPredicted RBP7.97□□□□□ -1.13
CHD3-201ENST00000330494 C15orf53Q8NAA6 179 aa7.97□□□□□ -1.13
CHD3-201ENST00000330494 SOCS3O14543 225 aa7.97□□□□□ -1.13
CHD3-201ENST00000330494 CEND1Q8N111 149 aa7.97□□□□□ -1.13
CHD3-201ENST00000330494 Q8N8P6 123 aa7.97□□□□□ -1.13
CHD3-201ENST00000330494 U3KQE9 123 aa7.97□□□□□ -1.13
CHD3-201ENST00000330494 COX8AP10176 69 aa7.97□□□□□ -1.13
CHD3-201ENST00000330494 DEFB1P60022 68 aa7.97□□□□□ -1.13
CHD3-201ENST00000330494 FGF6P10767 208 aa7.97□□□□□ -1.13
CHD3-201ENST00000330494 OR11H6Q8NGC7 330 aa7.97□□□□□ -1.13
CHD3-201ENST00000330494 AJUBAQ96IF1 538 aa7.97□□□□□ -1.13
CHD3-201ENST00000330494 TRAV12-1A0A0B4J245 112 aa7.96□□□□□ -1.13
CHD3-201ENST00000330494 GATA1P15976 413 aaPredicted RBP7.96□□□□□ -1.13
CHD3-201ENST00000330494 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.96□□□□□ -1.14
CHD3-201ENST00000330494 IGKV2-29A2NJV5 120 aaPredicted RBP7.96□□□□□ -1.14
CHD3-201ENST00000330494 ELANEP08246 267 aa7.96□□□□□ -1.14
CHD3-201ENST00000330494 KRTAP27-1Q3LI81 207 aa7.96□□□□□ -1.14
CHD3-201ENST00000330494 Q8NA96 180 aa7.96□□□□□ -1.14
CHD3-201ENST00000330494 Q9HAA7 133 aa7.96□□□□□ -1.14
CHD3-201ENST00000330494 OTOGLQ3ZCN5 2332 aa7.96□□□□□ -1.14
CHD3-201ENST00000330494 RPL32P62910 135 aaKnown RBP7.96□□□□□ -1.14
CHD3-201ENST00000330494 MSMPQ1L6U9 139 aa7.96□□□□□ -1.14
CHD3-201ENST00000330494 SUMO4Q6EEV6 95 aa7.95□□□□□ -1.14
CHD3-201ENST00000330494 UTRNP46939 3433 aa7.95□□□□□ -1.14
CHD3-201ENST00000330494 RHODO00212 210 aa7.95□□□□□ -1.14
CHD3-201ENST00000330494 VWC2Q2TAL6 325 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 409.7 ms