RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 CNFNQ9BYD5 112 aa13.32□□□□□ -0.28
PTP4A3-201ENST00000329397 TMEM160Q9NX00 188 aa13.32□□□□□ -0.28
PTP4A3-201ENST00000329397 MINOS1Q5TGZ0 78 aa13.32□□□□□ -0.28
PTP4A3-201ENST00000329397 TMEM190Q8WZ59 177 aa13.32□□□□□ -0.28
PTP4A3-201ENST00000329397 MINOS1-NBL1R4GNA1 71 aa13.32□□□□□ -0.28
PTP4A3-201ENST00000329397 CSPG4Q6UVK1 2322 aa13.31□□□□□ -0.28
PTP4A3-201ENST00000329397 H3BRM9 83 aa13.31□□□□□ -0.28
PTP4A3-201ENST00000329397 H3BVH4 76 aa13.31□□□□□ -0.28
PTP4A3-201ENST00000329397 ZC2HC1BQ5TFG8 222 aa13.31□□□□□ -0.28
PTP4A3-201ENST00000329397 OR9G4Q8NGQ1 327 aa13.31□□□□□ -0.28
PTP4A3-201ENST00000329397 KLK15Q9H2R5 256 aa13.31□□□□□ -0.28
PTP4A3-201ENST00000329397 CSMD2Q7Z408 3487 aa13.31□□□□□ -0.28
PTP4A3-201ENST00000329397 IGKV3-7A0A075B6H7 116 aa13.3□□□□□ -0.28
PTP4A3-201ENST00000329397 TRAV40A0A0B4J280 105 aa13.3□□□□□ -0.28
PTP4A3-201ENST00000329397 IGHV7-4-1A0A0J9YVY3 117 aa13.3□□□□□ -0.28
PTP4A3-201ENST00000329397 TMEM8BA6NDV4 472 aa13.3□□□□□ -0.28
PTP4A3-201ENST00000329397 TMEM78Q5T7P6 136 aa13.3□□□□□ -0.28
PTP4A3-201ENST00000329397 UFSP1Q6NVU6 142 aa13.3□□□□□ -0.28
PTP4A3-201ENST00000329397 DEFB104AQ8WTQ1 72 aa13.3□□□□□ -0.28
PTP4A3-201ENST00000329397 BPESC1Q9GZL8 116 aa13.3□□□□□ -0.28
PTP4A3-201ENST00000329397 OR2K2Q8NGT1 345 aa13.3□□□□□ -0.28
PTP4A3-201ENST00000329397 SMIM17P0DL12 118 aa13.29□□□□□ -0.28
PTP4A3-201ENST00000329397 TCTEX1D4Q5JR98 221 aa13.29□□□□□ -0.28
PTP4A3-201ENST00000329397 MRPL35Q9NZE8 188 aaKnown RBP13.29□□□□□ -0.28
PTP4A3-201ENST00000329397 TRBV12-3P01733 135 aa13.29□□□□□ -0.28
PTP4A3-201ENST00000329397 IGKCP01834 107 aa13.29□□□□□ -0.28
PTP4A3-201ENST00000329397 NXT2Q9NPJ8 142 aaKnown RBP13.29□□□□□ -0.28
PTP4A3-201ENST00000329397 OR11H12B2RN74 326 aa13.28□□□□□ -0.28
PTP4A3-201ENST00000329397 SPANXN1Q5VSR9 72 aa13.28□□□□□ -0.28
PTP4A3-201ENST00000329397 OR11H1Q8NG94 326 aa13.28□□□□□ -0.28
PTP4A3-201ENST00000329397 OR11H2Q8NH07 326 aa13.28□□□□□ -0.28
PTP4A3-201ENST00000329397 IGLV2-18A0A075B6J9 118 aa13.28□□□□□ -0.28
PTP4A3-201ENST00000329397 OOSP1A8MZH6 123 aa13.28□□□□□ -0.28
PTP4A3-201ENST00000329397 M0QXV9 152 aa13.28□□□□□ -0.28
PTP4A3-201ENST00000329397 OR4X2Q8NGF9 303 aa13.28□□□□□ -0.28
PTP4A3-201ENST00000329397 C20orf173Q96LM9 149 aa13.28□□□□□ -0.28
PTP4A3-201ENST00000329397 METTL26Q96S19 204 aa13.28□□□□□ -0.28
PTP4A3-201ENST00000329397 ITPR1Q14643 2758 aa13.27□□□□□ -0.28
PTP4A3-201ENST00000329397 RPL32P62910 135 aaKnown RBP13.27□□□□□ -0.28
PTP4A3-201ENST00000329397 MRAP2Q96G30 205 aa13.27□□□□□ -0.28
PTP4A3-201ENST00000329397 K7EP34 96 aa13.27□□□□□ -0.29
PTP4A3-201ENST00000329397 BRD3OSQ6XYD6 125 aa13.27□□□□□ -0.29
PTP4A3-201ENST00000329397 NRACQ8N912 160 aa13.27□□□□□ -0.29
PTP4A3-201ENST00000329397 C16orf92Q96LL3 132 aa13.27□□□□□ -0.29
PTP4A3-201ENST00000329397 SLC50A1Q9BRV3 221 aa13.27□□□□□ -0.29
PTP4A3-201ENST00000329397 CHAC1Q9BUX1 264 aa13.27□□□□□ -0.29
PTP4A3-201ENST00000329397 SPCS1Q9Y6A9 102 aa13.27□□□□□ -0.29
PTP4A3-201ENST00000329397 M0R381 172 aa13.26□□□□□ -0.29
PTP4A3-201ENST00000329397 UBE2E1P51965 193 aa13.26□□□□□ -0.29
PTP4A3-201ENST00000329397 Q8N8P6 123 aa13.26□□□□□ -0.29
PTP4A3-201ENST00000329397 DOPEY2Q9Y3R5 2298 aa13.26□□□□□ -0.29
PTP4A3-201ENST00000329397 TRBV25-1A0A075B6N4 114 aa13.26□□□□□ -0.29
PTP4A3-201ENST00000329397 CENPVL3A0A0U1RRI6 287 aa13.26□□□□□ -0.29
PTP4A3-201ENST00000329397 UNQ9165/PRO28630Q6UXU0 137 aa13.26□□□□□ -0.29
PTP4A3-201ENST00000329397 GTF2H5Q6ZYL4 71 aa13.26□□□□□ -0.29
PTP4A3-201ENST00000329397 MAPKAPK5-AS1Q8N8E1 139 aa13.26□□□□□ -0.29
PTP4A3-201ENST00000329397 GLMPQ8WWB7 406 aa13.26□□□□□ -0.29
PTP4A3-201ENST00000329397 VCX2Q9H322 139 aa13.26□□□□□ -0.29
PTP4A3-201ENST00000329397 SORL1Q92673 2214 aa13.26□□□□□ -0.29
PTP4A3-201ENST00000329397 EEF1AKMT3Q96AZ1 226 aa13.26□□□□□ -0.29
PTP4A3-201ENST00000329397 A0A1W2PPM0 123 aa13.25□□□□□ -0.29
PTP4A3-201ENST00000329397 LCNL1Q6ZST4 164 aa13.25□□□□□ -0.29
PTP4A3-201ENST00000329397 COL25A1Q9BXS0 654 aaPredicted RBP13.25□□□□□ -0.29
PTP4A3-201ENST00000329397 ZMAT4Q9H898 229 aa13.25□□□□□ -0.29
PTP4A3-201ENST00000329397 NHP2Q9NX24 153 aaKnown RBP13.25□□□□□ -0.29
PTP4A3-201ENST00000329397 DPM2O94777 84 aa13.25□□□□□ -0.29
PTP4A3-201ENST00000329397 SRSF2Q01130 221 aaKnown RBP13.25□□□□□ -0.29
PTP4A3-201ENST00000329397 F6UB75 175 aa13.24□□□□□ -0.29
PTP4A3-201ENST00000329397 IGHV3-11P01762 117 aa13.24□□□□□ -0.29
PTP4A3-201ENST00000329397 RBAKDNA6NC62 111 aa13.24□□□□□ -0.29
PTP4A3-201ENST00000329397 KLRB1Q12918 225 aa13.24□□□□□ -0.29
PTP4A3-201ENST00000329397 NPFFO15130 113 aa13.23□□□□□ -0.29
PTP4A3-201ENST00000329397 C5orf56Q8N8D9 126 aa13.23□□□□□ -0.29
PTP4A3-201ENST00000329397 LINC01546A6NGU7 62 aa13.23□□□□□ -0.29
PTP4A3-201ENST00000329397 TGFAP01135 160 aa13.23□□□□□ -0.29
PTP4A3-201ENST00000329397 RPL11P62913 178 aaKnown RBP13.23□□□□□ -0.29
PTP4A3-201ENST00000329397 LAGE3Q14657 143 aa13.23□□□□□ -0.29
PTP4A3-201ENST00000329397 RPL39LQ96EH5 51 aaKnown RBP13.23□□□□□ -0.29
PTP4A3-201ENST00000329397 LMO4P61968 165 aa13.22□□□□□ -0.29
PTP4A3-201ENST00000329397 ATP5G2Q06055 141 aa13.22□□□□□ -0.29
PTP4A3-201ENST00000329397 SAMD5Q5TGI4 173 aa13.22□□□□□ -0.29
PTP4A3-201ENST00000329397 CUBNO60494 3623 aa13.22□□□□□ -0.29
PTP4A3-201ENST00000329397 LY6DQ14210 128 aa13.22□□□□□ -0.29
PTP4A3-201ENST00000329397 LY6EQ16553 131 aa13.22□□□□□ -0.29
PTP4A3-201ENST00000329397 MYOZ3Q8TDC0 251 aa13.22□□□□□ -0.29
PTP4A3-201ENST00000329397 SMIM13P0DJ93 91 aa13.21□□□□□ -0.29
PTP4A3-201ENST00000329397 SRD5A1P18405 259 aa13.21□□□□□ -0.29
PTP4A3-201ENST00000329397 NEGR1Q7Z3B1 354 aa13.21□□□□□ -0.29
PTP4A3-201ENST00000329397 C14orf178Q8N769 122 aaPredicted RBP13.21□□□□□ -0.29
PTP4A3-201ENST00000329397 MUC4Q99102 2169 aa13.21□□□□□ -0.3
PTP4A3-201ENST00000329397 C9orf47Q6ZRZ4 202 aa13.2□□□□□ -0.3
PTP4A3-201ENST00000329397 UTP20O75691 2785 aaKnown RBP13.2□□□□□ -0.3
PTP4A3-201ENST00000329397 TRAV41A0A0B4J266 112 aa13.2□□□□□ -0.3
PTP4A3-201ENST00000329397 FABP2P12104 132 aa13.2□□□□□ -0.3
PTP4A3-201ENST00000329397 GPHB5Q86YW7 130 aa13.2□□□□□ -0.3
PTP4A3-201ENST00000329397 TRBV7-1A0A0A6YYK4 115 aa13.2□□□□□ -0.3
PTP4A3-201ENST00000329397 ATP5LO75964 103 aa13.19□□□□□ -0.3
PTP4A3-201ENST00000329397 MGPP08493 103 aa13.19□□□□□ -0.3
PTP4A3-201ENST00000329397 MTURNQ8N3F0 131 aa13.19□□□□□ -0.3
PTP4A3-201ENST00000329397 NPFFR1Q9GZQ6 430 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms