RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 FAM19A4Q96LR4 140 aa9.79□□□□□ -0.84
RPP40-201ENST00000319533 VGLL1Q99990 258 aa9.79□□□□□ -0.84
RPP40-201ENST00000319533 ZNF492Q9P255 531 aa9.79□□□□□ -0.84
RPP40-201ENST00000319533 RBAKDNA6NC62 111 aa9.78□□□□□ -0.84
RPP40-201ENST00000319533 HMGB3O15347 200 aaKnown RBP9.78□□□□□ -0.84
RPP40-201ENST00000319533 RNASE4P34096 147 aaKnown RBP9.78□□□□□ -0.84
RPP40-201ENST00000319533 RAB5CP51148 216 aa9.78□□□□□ -0.84
RPP40-201ENST00000319533 ZNF138P52744 262 aa9.78□□□□□ -0.84
RPP40-201ENST00000319533 BTN1A1Q13410 526 aa9.78□□□□□ -0.84
RPP40-201ENST00000319533 TMPRSS5Q9H3S3 457 aa9.78□□□□□ -0.84
RPP40-201ENST00000319533 A0A096LPF7 62 aa9.77□□□□□ -0.85
RPP40-201ENST00000319533 TRBV7-9A0A0J9YWB2 115 aa9.77□□□□□ -0.85
RPP40-201ENST00000319533 A0A1B0GV50 99 aa9.77□□□□□ -0.85
RPP40-201ENST00000319533 DIRC3C9JPN6 131 aa9.77□□□□□ -0.85
RPP40-201ENST00000319533 ARL14EPLP0DKL9 152 aa9.77□□□□□ -0.85
RPP40-201ENST00000319533 DPPA3Q6W0C5 159 aa9.77□□□□□ -0.85
RPP40-201ENST00000319533 Q6ZTI0 123 aa9.77□□□□□ -0.85
RPP40-201ENST00000319533 RAB24Q969Q5 203 aa9.77□□□□□ -0.85
RPP40-201ENST00000319533 LINC00467Q9BRT7 94 aa9.77□□□□□ -0.85
RPP40-201ENST00000319533 ACTR3CQ9C0K3 210 aaPredicted RBP9.77□□□□□ -0.85
RPP40-201ENST00000319533 CTXND1A0A1B0GTU2 59 aa9.76□□□□□ -0.85
RPP40-201ENST00000319533 MAP1LC3B2A6NCE7 125 aa9.76□□□□□ -0.85
RPP40-201ENST00000319533 PGPA6NDG6 321 aa9.76□□□□□ -0.85
RPP40-201ENST00000319533 STAG3L2P0CL84 134 aa9.76□□□□□ -0.85
RPP40-201ENST00000319533 STAG3L3P0CL85 134 aa9.76□□□□□ -0.85
RPP40-201ENST00000319533 FGF8P55075 233 aaPredicted RBP9.76□□□□□ -0.85
RPP40-201ENST00000319533 LINC00315P59091 139 aa9.76□□□□□ -0.85
RPP40-201ENST00000319533 CCL20P78556 96 aa9.76□□□□□ -0.85
RPP40-201ENST00000319533 C11orf72Q8NBR9 251 aa9.76□□□□□ -0.85
RPP40-201ENST00000319533 LYPD6BQ8NI32 183 aa9.76□□□□□ -0.85
RPP40-201ENST00000319533 Q8TAT8 98 aa9.76□□□□□ -0.85
RPP40-201ENST00000319533 MBD3L1Q8WWY6 194 aa9.76□□□□□ -0.85
RPP40-201ENST00000319533 MAP1LC3BQ9GZQ8 125 aa9.76□□□□□ -0.85
RPP40-201ENST00000319533 RPH3ALQ9UNE2 315 aa9.76□□□□□ -0.85
RPP40-201ENST00000319533 ZNF324O75467 553 aaPredicted RBP9.75□□□□□ -0.85
RPP40-201ENST00000319533 CXorf1O96002 111 aa9.75□□□□□ -0.85
RPP40-201ENST00000319533 GCHFRP30047 84 aa9.75□□□□□ -0.85
RPP40-201ENST00000319533 RAB14P61106 215 aa9.75□□□□□ -0.85
RPP40-201ENST00000319533 BLOC1S1P78537 153 aa9.75□□□□□ -0.85
RPP40-201ENST00000319533 ANXA2RQ3ZCQ2 193 aa9.75□□□□□ -0.85
RPP40-201ENST00000319533 EIF4E3Q8N5X7 224 aaKnown RBP9.75□□□□□ -0.85
RPP40-201ENST00000319533 ZFAND2AQ8N6M9 145 aa9.75□□□□□ -0.85
RPP40-201ENST00000319533 ARL6IP6Q8N6S5 226 aa9.75□□□□□ -0.85
RPP40-201ENST00000319533 TMEM167BQ9NRX6 74 aa9.75□□□□□ -0.85
RPP40-201ENST00000319533 VPS13BQ7Z7G8 4022 aa9.74□□□□□ -0.85
RPP40-201ENST00000319533 LINC00862A6NCI5 91 aa9.74□□□□□ -0.85
RPP40-201ENST00000319533 H2AFB1P0C5Y9 115 aa9.74□□□□□ -0.85
RPP40-201ENST00000319533 IQCF2Q8IXL9 164 aa9.74□□□□□ -0.85
RPP40-201ENST00000319533 SFT2D1Q8WV19 159 aa9.74□□□□□ -0.85
RPP40-201ENST00000319533 GSN-AS1Q9NRJ2 163 aa9.74□□□□□ -0.85
RPP40-201ENST00000319533 LENEPQ9Y5L5 61 aa9.74□□□□□ -0.85
RPP40-201ENST00000319533 IGHV1OR15-1A0A075B7D0 117 aa9.73□□□□□ -0.85
RPP40-201ENST00000319533 TRAV1-1A0A0B4J248 108 aa9.73□□□□□ -0.85
RPP40-201ENST00000319533 SIVA1O15304 175 aa9.73□□□□□ -0.85
RPP40-201ENST00000319533 SPINK4O60575 86 aa9.73□□□□□ -0.85
RPP40-201ENST00000319533 PRR9Q5T870 116 aa9.73□□□□□ -0.85
RPP40-201ENST00000319533 GOLT1AQ6ZVE7 132 aa9.73□□□□□ -0.85
RPP40-201ENST00000319533 TRGV2A0A075B6R0 118 aa9.72□□□□□ -0.85
RPP40-201ENST00000319533 SERTM2A0A1B0GWG4 89 aa9.72□□□□□ -0.85
RPP40-201ENST00000319533 K7EQM0 130 aa9.72□□□□□ -0.85
RPP40-201ENST00000319533 CDPF1Q6NVV7 123 aa9.72□□□□□ -0.85
RPP40-201ENST00000319533 COMMD7Q86VX2 200 aa9.72□□□□□ -0.85
RPP40-201ENST00000319533 SLC7A5P1Q8MH63 180 aa9.72□□□□□ -0.85
RPP40-201ENST00000319533 C5orf17Q8NAS9 161 aa9.72□□□□□ -0.85
RPP40-201ENST00000319533 SUN5Q8TC36 379 aa9.72□□□□□ -0.85
RPP40-201ENST00000319533 TRGV1A0A0A0MS02 117 aa9.71□□□□□ -0.86
RPP40-201ENST00000319533 EPM2AB3EWF7 344 aa9.71□□□□□ -0.86
RPP40-201ENST00000319533 XGP55808 180 aa9.71□□□□□ -0.86
RPP40-201ENST00000319533 TCL1AP56279 114 aa9.71□□□□□ -0.86
RPP40-201ENST00000319533 GNG5P63218 68 aa9.71□□□□□ -0.86
RPP40-201ENST00000319533 IBA57Q5T440 356 aaKnown RBP9.71□□□□□ -0.86
RPP40-201ENST00000319533 NDFIP1Q9BT67 221 aa9.71□□□□□ -0.86
RPP40-201ENST00000319533 MED9Q9NWA0 146 aa9.71□□□□□ -0.86
RPP40-201ENST00000319533 KLF12Q9Y4X4 402 aa9.71□□□□□ -0.86
RPP40-201ENST00000319533 DMBT1Q9UGM3 2413 aaPredicted RBP9.71□□□□□ -0.86
RPP40-201ENST00000319533 NXPH4O95158 308 aa9.7□□□□□ -0.86
RPP40-201ENST00000319533 SRSF3P84103 164 aaKnown RBP9.7□□□□□ -0.86
RPP40-201ENST00000319533 ZNF415Q09FC8 603 aa9.7□□□□□ -0.86
RPP40-201ENST00000319533 Q6AWC8 147 aa9.7□□□□□ -0.86
RPP40-201ENST00000319533 ICOSQ9Y6W8 199 aa9.7□□□□□ -0.86
RPP40-201ENST00000319533 TRAV8-1A0A0A6YYK1 113 aa9.69□□□□□ -0.86
RPP40-201ENST00000319533 A0A1W2PRE2 83 aa9.69□□□□□ -0.86
RPP40-201ENST00000319533 PAX4O43316 350 aa9.69□□□□□ -0.86
RPP40-201ENST00000319533 TCRAP04437 139 aa9.69□□□□□ -0.86
RPP40-201ENST00000319533 ERVFC1-1P60608 527 aa9.69□□□□□ -0.86
RPP40-201ENST00000319533 SUMO1P63165 101 aaKnown RBP9.69□□□□□ -0.86
RPP40-201ENST00000319533 SLAQ13239 276 aa9.69□□□□□ -0.86
RPP40-201ENST00000319533 MUC21Q5SSG8 566 aa9.69□□□□□ -0.86
RPP40-201ENST00000319533 FAM159AQ6UWV7 190 aa9.69□□□□□ -0.86
RPP40-201ENST00000319533 TREM1Q9NP99 234 aa9.69□□□□□ -0.86
RPP40-201ENST00000319533 PRO0255Q9UI72 69 aa9.69□□□□□ -0.86
RPP40-201ENST00000319533 MYCBP2O75592 4640 aa9.68□□□□□ -0.86
RPP40-201ENST00000319533 TRGV11A0A075B6L2 103 aa9.68□□□□□ -0.86
RPP40-201ENST00000319533 GGTLC3B5MD39 225 aa9.68□□□□□ -0.86
RPP40-201ENST00000319533 EREGO14944 169 aa9.68□□□□□ -0.86
RPP40-201ENST00000319533 TOR2AQ5JU69 321 aa9.68□□□□□ -0.86
RPP40-201ENST00000319533 LYPD5Q6UWN5 251 aa9.68□□□□□ -0.86
RPP40-201ENST00000319533 Q6ZQT7 251 aa9.68□□□□□ -0.86
RPP40-201ENST00000319533 NFE4Q86UQ8 179 aa9.68□□□□□ -0.86
RPP40-201ENST00000319533 CYB561D1Q8N8Q1 229 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms