RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 PEF1Q9UBV8 284 aaKnown RBP13.9□□□□□ -0.18
SHISA3-201ENST00000319234 DOPEY2Q9Y3R5 2298 aa13.89□□□□□ -0.19
SHISA3-201ENST00000319234 MUC21A0A0G2JKD1 596 aa13.89□□□□□ -0.19
SHISA3-201ENST00000319234 MUC21A0A140T8X8 626 aa13.89□□□□□ -0.19
SHISA3-201ENST00000319234 MUC21Q5SSG8 566 aa13.89□□□□□ -0.19
SHISA3-201ENST00000319234 TEX29Q8N6K0 151 aa13.89□□□□□ -0.19
SHISA3-201ENST00000319234 IFI27L1Q96BM0 104 aa13.89□□□□□ -0.19
SHISA3-201ENST00000319234 ZNF702PQ9H963 129 aa13.89□□□□□ -0.19
SHISA3-201ENST00000319234 C8orf86Q6ZUL3 223 aa13.89□□□□□ -0.19
SHISA3-201ENST00000319234 MAP1AP78559 2803 aaPredicted RBP13.88□□□□□ -0.19
SHISA3-201ENST00000319234 TRAV8-2A0A0B4J237 113 aa13.88□□□□□ -0.19
SHISA3-201ENST00000319234 SMAD7O15105 426 aaKnown RBP13.88□□□□□ -0.19
SHISA3-201ENST00000319234 IL17RELQ6ZVW7 336 aa13.88□□□□□ -0.19
SHISA3-201ENST00000319234 RNF182Q8N6D2 247 aa13.88□□□□□ -0.19
SHISA3-201ENST00000319234 NXT2Q9NPJ8 142 aaKnown RBP13.88□□□□□ -0.19
SHISA3-201ENST00000319234 CENPEQ02224 2701 aa13.88□□□□□ -0.19
SHISA3-201ENST00000319234 SMKR1H3BMG3 65 aa13.87□□□□□ -0.19
SHISA3-201ENST00000319234 TAX1BP3O14907 124 aa13.87□□□□□ -0.19
SHISA3-201ENST00000319234 CD5LO43866 347 aa13.87□□□□□ -0.19
SHISA3-201ENST00000319234 PSMG4Q5JS54 123 aa13.87□□□□□ -0.19
SHISA3-201ENST00000319234 TMEM78Q5T7P6 136 aa13.87□□□□□ -0.19
SHISA3-201ENST00000319234 C2orf91Q6ZV80 131 aa13.87□□□□□ -0.19
SHISA3-201ENST00000319234 Q6ZVH6 145 aa13.87□□□□□ -0.19
SHISA3-201ENST00000319234 AGPAT4-IT1Q9H0P7 198 aa13.87□□□□□ -0.19
SHISA3-201ENST00000319234 C10orf99Q6UWK7 81 aa13.87□□□□□ -0.19
SHISA3-201ENST00000319234 C9orf47Q6ZRZ4 202 aa13.87□□□□□ -0.19
SHISA3-201ENST00000319234 CACNG7P62955 275 aa13.86□□□□□ -0.19
SHISA3-201ENST00000319234 MSRB1Q9NZV6 116 aa13.86□□□□□ -0.19
SHISA3-201ENST00000319234 FGF6P10767 208 aa13.85□□□□□ -0.19
SHISA3-201ENST00000319234 FOXE3Q13461 319 aa13.85□□□□□ -0.19
SHISA3-201ENST00000319234 APCP25054 2843 aa13.85□□□□□ -0.19
SHISA3-201ENST00000319234 IGKV3D-20A0A0C4DH25 116 aa13.85□□□□□ -0.19
SHISA3-201ENST00000319234 IGHV7-4-1A0A0J9YVY3 117 aa13.85□□□□□ -0.19
SHISA3-201ENST00000319234 ELANEP08246 267 aa13.85□□□□□ -0.19
SHISA3-201ENST00000319234 SEC11AP67812 179 aa13.85□□□□□ -0.19
SHISA3-201ENST00000319234 ANKRD39Q53RE8 183 aa13.85□□□□□ -0.19
SHISA3-201ENST00000319234 GPHB5Q86YW7 130 aa13.85□□□□□ -0.19
SHISA3-201ENST00000319234 C16orf92Q96LL3 132 aa13.85□□□□□ -0.19
SHISA3-201ENST00000319234 FOXC2Q99958 501 aa13.85□□□□□ -0.19
SHISA3-201ENST00000319234 K7EMT4 169 aa13.84□□□□□ -0.19
SHISA3-201ENST00000319234 TNFRSF6BO95407 300 aa13.84□□□□□ -0.19
SHISA3-201ENST00000319234 FCER1GP30273 86 aa13.84□□□□□ -0.19
SHISA3-201ENST00000319234 BOD1L2Q8IYS8 172 aa13.84□□□□□ -0.19
SHISA3-201ENST00000319234 DAZ1Q9NQZ3 744 aaKnown RBP13.84□□□□□ -0.19
SHISA3-201ENST00000319234 LENEPQ9Y5L5 61 aa13.84□□□□□ -0.19
SHISA3-201ENST00000319234 SIVA1O15304 175 aa13.83□□□□□ -0.19
SHISA3-201ENST00000319234 VAMP3Q15836 100 aa13.83□□□□□ -0.19
SHISA3-201ENST00000319234 TM4SF20Q53R12 229 aa13.83□□□□□ -0.19
SHISA3-201ENST00000319234 Q8N2B8 174 aa13.83□□□□□ -0.19
SHISA3-201ENST00000319234 OR9G4Q8NGQ1 327 aa13.83□□□□□ -0.19
SHISA3-201ENST00000319234 TENM4Q6N022 2769 aa13.83□□□□□ -0.2
SHISA3-201ENST00000319234 SMIM15Q7Z3B0 74 aa13.83□□□□□ -0.2
SHISA3-201ENST00000319234 TMEM86BQ8N661 226 aa13.83□□□□□ -0.2
SHISA3-201ENST00000319234 MYOZ3Q8TDC0 251 aa13.83□□□□□ -0.2
SHISA3-201ENST00000319234 RHPN1-AS1Q9BWJ2 59 aa13.83□□□□□ -0.2
SHISA3-201ENST00000319234 IGHV4-4A0A075B6R2 117 aa13.82□□□□□ -0.2
SHISA3-201ENST00000319234 PRSS47A8MTI9 375 aa13.82□□□□□ -0.2
SHISA3-201ENST00000319234 SMPXQ9UHP9 88 aa13.82□□□□□ -0.2
SHISA3-201ENST00000319234 CBY1Q9Y3M2 126 aa13.82□□□□□ -0.2
SHISA3-201ENST00000319234 CREBBPQ92793 2442 aa13.82□□□□□ -0.2
SHISA3-201ENST00000319234 K7EP13 123 aa13.82□□□□□ -0.2
SHISA3-201ENST00000319234 TMEM97Q5BJF2 176 aa13.82□□□□□ -0.2
SHISA3-201ENST00000319234 Q8N8P6 123 aa13.82□□□□□ -0.2
SHISA3-201ENST00000319234 C11orf21Q9P2W6 132 aa13.82□□□□□ -0.2
SHISA3-201ENST00000319234 NBPF19A0A087WUL8 3843 aa13.81□□□□□ -0.2
SHISA3-201ENST00000319234 FXYD7P58549 80 aa13.81□□□□□ -0.2
SHISA3-201ENST00000319234 RNF152Q8N8N0 203 aa13.81□□□□□ -0.2
SHISA3-201ENST00000319234 OR4C5Q8NGB2 326 aa13.81□□□□□ -0.2
SHISA3-201ENST00000319234 DUX5Q96PT3 197 aa13.81□□□□□ -0.2
SHISA3-201ENST00000319234 UFC1Q9Y3C8 167 aa13.81□□□□□ -0.2
SHISA3-201ENST00000319234 SOCS3O14543 225 aa13.8□□□□□ -0.2
SHISA3-201ENST00000319234 SNAI2O43623 268 aa13.8□□□□□ -0.2
SHISA3-201ENST00000319234 LGALS1P09382 135 aaKnown RBP13.8□□□□□ -0.2
SHISA3-201ENST00000319234 LEPP41159 167 aa13.8□□□□□ -0.2
SHISA3-201ENST00000319234 C20orf173Q96LM9 149 aa13.8□□□□□ -0.2
SHISA3-201ENST00000319234 UBE2E2Q96LR5 201 aa13.8□□□□□ -0.2
SHISA3-201ENST00000319234 ZANQ9Y493 2812 aa13.79□□□□□ -0.2
SHISA3-201ENST00000319234 OR2K2Q8NGT1 345 aa13.79□□□□□ -0.2
SHISA3-201ENST00000319234 ZMAT4Q9H898 229 aa13.79□□□□□ -0.2
SHISA3-201ENST00000319234 HSD52Q0P140 79 aa13.78□□□□□ -0.2
SHISA3-201ENST00000319234 IGLV2-18A0A075B6J9 118 aa13.78□□□□□ -0.2
SHISA3-201ENST00000319234 GAS8-AS1O95177 125 aa13.78□□□□□ -0.2
SHISA3-201ENST00000319234 RPL11P62913 178 aaKnown RBP13.78□□□□□ -0.2
SHISA3-201ENST00000319234 KRTAP1-1Q07627 177 aa13.78□□□□□ -0.2
SHISA3-201ENST00000319234 LINC00477Q96M19 166 aa13.78□□□□□ -0.2
SHISA3-201ENST00000319234 ATP5LO75964 103 aa13.77□□□□□ -0.21
SHISA3-201ENST00000319234 EVI2AP22794 236 aa13.77□□□□□ -0.21
SHISA3-201ENST00000319234 A6NDN8 102 aa13.76□□□□□ -0.21
SHISA3-201ENST00000319234 OVOL1O14753 267 aa13.76□□□□□ -0.21
SHISA3-201ENST00000319234 ODF1Q14990 250 aa13.76□□□□□ -0.21
SHISA3-201ENST00000319234 DKK2Q9UBU2 259 aa13.76□□□□□ -0.21
SHISA3-201ENST00000319234 FASNP49327 2511 aaKnown RBP13.76□□□□□ -0.21
SHISA3-201ENST00000319234 CBY3A6NI87 242 aa13.76□□□□□ -0.21
SHISA3-201ENST00000319234 NRACQ8N912 160 aa13.76□□□□□ -0.21
SHISA3-201ENST00000319234 C7orf71A4D174 169 aa13.75□□□□□ -0.21
SHISA3-201ENST00000319234 EDN2P20800 178 aa13.75□□□□□ -0.21
SHISA3-201ENST00000319234 SPANXN1Q5VSR9 72 aa13.75□□□□□ -0.21
SHISA3-201ENST00000319234 TMEM158Q8WZ71 300 aa13.75□□□□□ -0.21
SHISA3-201ENST00000319234 MRAP2Q96G30 205 aa13.75□□□□□ -0.21
SHISA3-201ENST00000319234 C18orf15Q96N68 181 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms