RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 RBFOX3A6NFN3 312 aa6.2□□□□□ -1.42
CHD6-201ENST00000309279 FNDC10F2Z333 226 aa6.2□□□□□ -1.42
CHD6-201ENST00000309279 J3QR89 54 aa6.2□□□□□ -1.42
CHD6-201ENST00000309279 NDUFA4O00483 81 aa6.2□□□□□ -1.42
CHD6-201ENST00000309279 NDUFC2O95298 119 aa6.2□□□□□ -1.42
CHD6-201ENST00000309279 IGKV1-17P01599 117 aa6.2□□□□□ -1.42
CHD6-201ENST00000309279 IGLC1P0CG04 106 aa6.2□□□□□ -1.42
CHD6-201ENST00000309279 GZMBP10144 247 aa6.2□□□□□ -1.42
CHD6-201ENST00000309279 FGF6P10767 208 aa6.2□□□□□ -1.42
CHD6-201ENST00000309279 SYNJ2BPP57105 145 aa6.2□□□□□ -1.42
CHD6-201ENST00000309279 THAP6Q8TBB0 222 aa6.2□□□□□ -1.42
CHD6-201ENST00000309279 TMEM18Q96B42 140 aa6.2□□□□□ -1.42
CHD6-201ENST00000309279 NAA38Q9BRA0 125 aaKnown RBP6.2□□□□□ -1.42
CHD6-201ENST00000309279 RNF126Q9BV68 326 aa6.2□□□□□ -1.42
CHD6-201ENST00000309279 SORL1Q92673 2214 aa6.2□□□□□ -1.42
CHD6-201ENST00000309279 FAM24AA6NFZ4 105 aa6.19□□□□□ -1.42
CHD6-201ENST00000309279 IGLL1P15814 213 aa6.19□□□□□ -1.42
CHD6-201ENST00000309279 INSL3P51460 131 aa6.19□□□□□ -1.42
CHD6-201ENST00000309279 RND2P52198 227 aa6.19□□□□□ -1.42
CHD6-201ENST00000309279 YPEL3P61236 119 aaPredicted RBP6.19□□□□□ -1.42
CHD6-201ENST00000309279 EIF5AP63241 154 aaKnown RBP6.19□□□□□ -1.42
CHD6-201ENST00000309279 SLC38A11Q08AI6 406 aa6.19□□□□□ -1.42
CHD6-201ENST00000309279 BATFQ16520 125 aa6.19□□□□□ -1.42
CHD6-201ENST00000309279 Q5XG85 94 aa6.19□□□□□ -1.42
CHD6-201ENST00000309279 UNQ9165/PRO28630Q6UXU0 137 aa6.19□□□□□ -1.42
CHD6-201ENST00000309279 FOXI2Q6ZQN5 318 aa6.19□□□□□ -1.42
CHD6-201ENST00000309279 TMUB2Q71RG4 321 aa6.19□□□□□ -1.42
CHD6-201ENST00000309279 TMEM252Q8N6L7 170 aa6.19□□□□□ -1.42
CHD6-201ENST00000309279 OR10P1Q8NGE3 313 aa6.19□□□□□ -1.42
CHD6-201ENST00000309279 TMEM190Q8WZ59 177 aa6.19□□□□□ -1.42
CHD6-201ENST00000309279 SLC25A31Q9H0C2 315 aa6.19□□□□□ -1.42
CHD6-201ENST00000309279 TUBA4BQ9H853 241 aa6.19□□□□□ -1.42
CHD6-201ENST00000309279 JPT2Q9H910 190 aa6.19□□□□□ -1.42
CHD6-201ENST00000309279 SMCO4Q9NRQ5 59 aa6.19□□□□□ -1.42
CHD6-201ENST00000309279 YTHDF2Q9Y5A9 579 aaKnown RBP6.19□□□□□ -1.42
CHD6-201ENST00000309279 DNAH3Q8TD57 4116 aa6.19□□□□□ -1.42
CHD6-201ENST00000309279 IGKV1D-37A0A075B6S9 117 aa6.18□□□□□ -1.42
CHD6-201ENST00000309279 IGKV1OR2-108A0A075B7D4 117 aa6.18□□□□□ -1.42
CHD6-201ENST00000309279 IGHV3-35A0A0C4DH35 117 aa6.18□□□□□ -1.42
CHD6-201ENST00000309279 ZNF705EA8MWA4 302 aaPredicted RBP6.18□□□□□ -1.42
CHD6-201ENST00000309279 P01737 135 aa6.18□□□□□ -1.42
CHD6-201ENST00000309279 NHLRC4P0CG21 123 aaPredicted RBP6.18□□□□□ -1.42
CHD6-201ENST00000309279 OR10J1P30954 320 aa6.18□□□□□ -1.42
CHD6-201ENST00000309279 C10orf91Q5T1B1 145 aa6.18□□□□□ -1.42
CHD6-201ENST00000309279 C9orf66Q5T8R8 295 aa6.18□□□□□ -1.42
CHD6-201ENST00000309279 ZNF705AQ6ZN79 300 aaPredicted RBP6.18□□□□□ -1.42
CHD6-201ENST00000309279 C2orf48Q96LS8 159 aa6.18□□□□□ -1.42
CHD6-201ENST00000309279 TMEM70Q9BUB7 260 aa6.18□□□□□ -1.42
CHD6-201ENST00000309279 ZNF471Q9BX82 626 aaPredicted RBP6.18□□□□□ -1.42
CHD6-201ENST00000309279 GNB1LQ9BYB4 327 aa6.18□□□□□ -1.42
CHD6-201ENST00000309279 CYSLTR1Q9Y271 337 aa6.18□□□□□ -1.42
CHD6-201ENST00000309279 TRAV14DV4A0A0A6YYC5 116 aa6.17□□□□□ -1.42
CHD6-201ENST00000309279 TRAV26-2A0A0B4J265 109 aa6.17□□□□□ -1.42
CHD6-201ENST00000309279 C2orf70A6NJV1 201 aa6.17□□□□□ -1.42
CHD6-201ENST00000309279 H7BYZ3 331 aa6.17□□□□□ -1.42
CHD6-201ENST00000309279 EIF5AL1Q6IS14 154 aaKnown RBP6.17□□□□□ -1.42
CHD6-201ENST00000309279 HIST3H2BBQ8N257 126 aa6.17□□□□□ -1.42
CHD6-201ENST00000309279 TRGV9Q99603 122 aa6.17□□□□□ -1.42
CHD6-201ENST00000309279 RARRES2Q99969 163 aa6.17□□□□□ -1.42
CHD6-201ENST00000309279 NPVFQ9HCQ7 196 aa6.17□□□□□ -1.42
CHD6-201ENST00000309279 CST7O76096 145 aa6.17□□□□□ -1.42
CHD6-201ENST00000309279 CXorf1O96002 111 aa6.17□□□□□ -1.42
CHD6-201ENST00000309279 CBLN1P23435 193 aa6.17□□□□□ -1.42
CHD6-201ENST00000309279 EGFEM1PQ0D2K5 195 aa6.17□□□□□ -1.42
CHD6-201ENST00000309279 RIGQ13278 110 aa6.17□□□□□ -1.42
CHD6-201ENST00000309279 KPRPQ5T749 579 aaPredicted RBP6.17□□□□□ -1.42
CHD6-201ENST00000309279 OR51G1Q8NGK1 321 aa6.17□□□□□ -1.42
CHD6-201ENST00000309279 CARD19Q96LW7 228 aa6.17□□□□□ -1.42
CHD6-201ENST00000309279 DAZ1Q9NQZ3 744 aaKnown RBP6.17□□□□□ -1.42
CHD6-201ENST00000309279 VAX2Q9UIW0 290 aa6.17□□□□□ -1.42
CHD6-201ENST00000309279 FBN3Q75N90 2809 aa6.16□□□□□ -1.42
CHD6-201ENST00000309279 A6NDN8 102 aa6.16□□□□□ -1.42
CHD6-201ENST00000309279 ZFP92A6NM28 416 aa6.16□□□□□ -1.42
CHD6-201ENST00000309279 BCL2L11O43521 198 aa6.16□□□□□ -1.42
CHD6-201ENST00000309279 IGLV1-51P01701 117 aa6.16□□□□□ -1.42
CHD6-201ENST00000309279 ATP5G1P05496 136 aa6.16□□□□□ -1.42
CHD6-201ENST00000309279 GPX1P07203 203 aa6.16□□□□□ -1.42
CHD6-201ENST00000309279 HBG1P69891 147 aa6.16□□□□□ -1.42
CHD6-201ENST00000309279 HBG2P69892 147 aa6.16□□□□□ -1.42
CHD6-201ENST00000309279 ZNF90Q03938 601 aa6.16□□□□□ -1.42
CHD6-201ENST00000309279 KHDC3LQ587J8 217 aa6.16□□□□□ -1.42
CHD6-201ENST00000309279 ZNF506Q5JVG8 444 aa6.16□□□□□ -1.42
CHD6-201ENST00000309279 OR2T35Q8NGX2 323 aa6.16□□□□□ -1.42
CHD6-201ENST00000309279 EDA2RQ9HAV5 297 aa6.16□□□□□ -1.42
CHD6-201ENST00000309279 ZNF256Q9Y2P7 627 aaPredicted RBP6.16□□□□□ -1.42
CHD6-201ENST00000309279 MEGF8Q7Z7M0 2845 aa6.15□□□□□ -1.42
CHD6-201ENST00000309279 WI2-2373I1.2A0A1W2PRP0 233 aa6.15□□□□□ -1.42
CHD6-201ENST00000309279 G3V3Q6 166 aa6.15□□□□□ -1.42
CHD6-201ENST00000309279 CCDC179H3BU77 68 aa6.15□□□□□ -1.42
CHD6-201ENST00000309279 IGLC6P0CF74 106 aa6.15□□□□□ -1.42
CHD6-201ENST00000309279 AKR1C1Q04828 323 aa6.15□□□□□ -1.42
CHD6-201ENST00000309279 IQCJQ1A5X6 159 aa6.15□□□□□ -1.42
CHD6-201ENST00000309279 BEAN1Q3B7T3 259 aa6.15□□□□□ -1.42
CHD6-201ENST00000309279 DEFB125Q8N687 156 aa6.15□□□□□ -1.42
CHD6-201ENST00000309279 OVOL2Q9BRP0 275 aa6.15□□□□□ -1.42
CHD6-201ENST00000309279 ZNF586Q9NXT0 402 aa6.15□□□□□ -1.42
CHD6-201ENST00000309279 IGHV3OR16-8A0A075B7F1 116 aa6.14□□□□□ -1.43
CHD6-201ENST00000309279 TRAV5A0A0B4J249 113 aa6.14□□□□□ -1.43
CHD6-201ENST00000309279 IGHV7-4-1A0A0J9YVY3 117 aa6.14□□□□□ -1.43
CHD6-201ENST00000309279 F6UB75 175 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms