RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 PLEKHB2Q96CS7 222 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 LITAFQ99732 161 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 LOC389332A0A1B0GUA5 103 aa4.09□□□□□ -1.75
VPS50-202ENST00000305866 A6NDN8 102 aa4.09□□□□□ -1.75
VPS50-202ENST00000305866 GRNP28799 593 aaKnown RBP4.09□□□□□ -1.75
VPS50-202ENST00000305866 ZFAND2AQ8N6M9 145 aa4.09□□□□□ -1.75
VPS50-202ENST00000305866 MYOZ3Q8TDC0 251 aa4.09□□□□□ -1.75
VPS50-202ENST00000305866 AAMDCQ9H7C9 122 aa4.09□□□□□ -1.75
VPS50-202ENST00000305866 NXT2Q9NPJ8 142 aaKnown RBP4.09□□□□□ -1.75
VPS50-202ENST00000305866 ANK2Q01484 3957 aa4.09□□□□□ -1.75
VPS50-202ENST00000305866 IGKCP01834 107 aa4.09□□□□□ -1.75
VPS50-202ENST00000305866 GTF2H5Q6ZYL4 71 aa4.09□□□□□ -1.75
VPS50-202ENST00000305866 PTH2Q96A98 100 aa4.09□□□□□ -1.75
VPS50-202ENST00000305866 MRAP2Q96G30 205 aa4.09□□□□□ -1.75
VPS50-202ENST00000305866 AGPAT4-IT1Q9H0P7 198 aa4.09□□□□□ -1.75
VPS50-202ENST00000305866 RPH3ALQ9UNE2 315 aa4.09□□□□□ -1.75
VPS50-202ENST00000305866 TSSC4Q9Y5U2 329 aaPredicted RBP4.09□□□□□ -1.75
VPS50-202ENST00000305866 OTOGLQ3ZCN5 2332 aa4.09□□□□□ -1.75
VPS50-202ENST00000305866 FAM186AA6NE01 2351 aa4.09□□□□□ -1.76
VPS50-202ENST00000305866 TRAV40A0A0B4J280 105 aa4.09□□□□□ -1.76
VPS50-202ENST00000305866 FABP5P3A8MUU1 101 aa4.09□□□□□ -1.76
VPS50-202ENST00000305866 LEPP41159 167 aa4.09□□□□□ -1.76
VPS50-202ENST00000305866 WFDC3Q8IUB2 231 aa4.09□□□□□ -1.76
VPS50-202ENST00000305866 LINC01560Q8TB33 94 aa4.09□□□□□ -1.76
VPS50-202ENST00000305866 FBN2P35556 2912 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 K7EMT4 169 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 ELANEP08246 267 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 SMIM13P0DJ93 91 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 GATA3P23771 443 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 GTSCR1Q86UQ5 136 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 C20orf78Q9BR46 151 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 VPS25Q9BRG1 176 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 C22orf24Q9Y442 160 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 ZDBF2Q9HCK1 2354 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 IGHV4OR15-8A0A075B7B6 117 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 A0A087WW49 117 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 TRAV26-2A0A0B4J265 109 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 LINC01549A6NIU2 74 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 H3BMG7 143 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 GNG7O60262 68 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 RNASE3P12724 160 aaKnown RBP4.08□□□□□ -1.76
VPS50-202ENST00000305866 XGP55808 180 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 ATP5G2Q06055 141 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 SAMD13Q5VXD3 122 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 SDIM1Q6ZPB5 146 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 FA2HQ7L5A8 372 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 PRSS3P2Q8NHM4 247 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 BAALCQ8WXS3 180 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 A6NDX4 124 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 FAM90A27PA6NNH2 459 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 LYNX1G3V0Z9 82 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 NDUFA4O00483 81 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 IGHV3-30P01768 117 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 IGHV3-30-5P0DP03 117 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 LYNX1P0DP58 116 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 FOXI1Q12951 378 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 ZC2HC1BQ5TFG8 222 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 Q6ZS46 218 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 RAB37Q96AX2 223 aa4.08□□□□□ -1.76
VPS50-202ENST00000305866 A0A096LNT2 108 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 FSHBP01225 129 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 IGHG2P01859 326 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 TM4SF20Q53R12 229 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 RNF182Q8N6D2 247 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 USMG5Q96IX5 58 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 NPFFO15130 113 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 TCTAP57738 103 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 ZFP2Q6ZN57 461 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 C9orf139Q6ZV77 190 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 EEF1AKMT3Q96AZ1 226 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 LINC00477Q96M19 166 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 COL25A1Q9BXS0 654 aaPredicted RBP4.07□□□□□ -1.76
VPS50-202ENST00000305866 S4R3C0 116 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 GPR179Q6PRD1 2367 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 A0A0J9YY99 117 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 KLLNB2CW77 178 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 H0Y8G0 127 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 CCL21O00585 134 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 ATP5LO75964 103 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 DPM2O94777 84 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 COX7A1P24310 79 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 POLR2KP53803 58 aaKnown RBP4.07□□□□□ -1.76
VPS50-202ENST00000305866 KLRD1Q13241 179 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 PIK3CD-AS1Q5SR53 167 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 AMTNQ6UX39 209 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 ZNRF2Q8NHG8 242 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 LINC00467Q9BRT7 94 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 C1QTNF4Q9BXJ3 329 aa4.07□□□□□ -1.76
VPS50-202ENST00000305866 CMYA5Q8N3K9 4069 aa4.06□□□□□ -1.76
VPS50-202ENST00000305866 MYMXA0A1B0GTQ4 84 aa4.06□□□□□ -1.76
VPS50-202ENST00000305866 PGPEP1Q9NXJ5 209 aa4.06□□□□□ -1.76
VPS50-202ENST00000305866 MOB4Q9Y3A3 225 aa4.06□□□□□ -1.76
VPS50-202ENST00000305866 MXRA5Q9NR99 2828 aa4.06□□□□□ -1.76
VPS50-202ENST00000305866 TRBV6-5A0A0K0K1A5 114 aa4.06□□□□□ -1.76
VPS50-202ENST00000305866 F8VRH5 84 aa4.06□□□□□ -1.76
VPS50-202ENST00000305866 ATP6V0E1O15342 81 aa4.06□□□□□ -1.76
VPS50-202ENST00000305866 CFC1BP0CG36 223 aa4.06□□□□□ -1.76
VPS50-202ENST00000305866 CFC1P0CG37 223 aa4.06□□□□□ -1.76
VPS50-202ENST00000305866 NMUP48645 174 aa4.06□□□□□ -1.76
VPS50-202ENST00000305866 GTSF1LQ9H1H1 148 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms