RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 YAE1D1Q9NRH1 226 aa7.91□□□□□ -1.14
CLDN1-201ENST00000295522 LYPD1Q8N2G4 141 aa7.9□□□□□ -1.14
CLDN1-201ENST00000295522 SPTAN1Q13813 2472 aaKnown RBP7.9□□□□□ -1.14
CLDN1-201ENST00000295522 PRAC2D3DTV9 90 aa7.9□□□□□ -1.14
CLDN1-201ENST00000295522 C2orf66Q6UXQ4 117 aa7.9□□□□□ -1.14
CLDN1-201ENST00000295522 DYNAPQ8N1N2 210 aa7.9□□□□□ -1.14
CLDN1-201ENST00000295522 IGLC6P0CF74 106 aa7.9□□□□□ -1.15
CLDN1-201ENST00000295522 RPL39LQ96EH5 51 aaKnown RBP7.9□□□□□ -1.15
CLDN1-201ENST00000295522 PPDPFQ9H3Y8 114 aa7.9□□□□□ -1.15
CLDN1-201ENST00000295522 PRO1854Q9UHT4 67 aa7.9□□□□□ -1.15
CLDN1-201ENST00000295522 VSTM5A8MXK1 200 aa7.89□□□□□ -1.15
CLDN1-201ENST00000295522 I3L2K1 104 aa7.89□□□□□ -1.15
CLDN1-201ENST00000295522 HOXB4P17483 251 aaPredicted RBP7.89□□□□□ -1.15
CLDN1-201ENST00000295522 NPC2P61916 151 aa7.89□□□□□ -1.15
CLDN1-201ENST00000295522 Q6ZS46 218 aa7.89□□□□□ -1.15
CLDN1-201ENST00000295522 C14orf178Q8N769 122 aaPredicted RBP7.89□□□□□ -1.15
CLDN1-201ENST00000295522 FCN3O75636 299 aa7.89□□□□□ -1.15
CLDN1-201ENST00000295522 TMEM95Q3KNT9 176 aa7.89□□□□□ -1.15
CLDN1-201ENST00000295522 Q8N1Y9 231 aa7.89□□□□□ -1.15
CLDN1-201ENST00000295522 ADGRG4Q8IZF6 3080 aa7.89□□□□□ -1.15
CLDN1-201ENST00000295522 A0A1W2PNU3 283 aaPredicted RBP7.88□□□□□ -1.15
CLDN1-201ENST00000295522 INS-IGF2F8WCM5 200 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 LGALS3P17931 250 aaKnown RBP7.88□□□□□ -1.15
CLDN1-201ENST00000295522 PVRIGQ6DKI7 326 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 GFRALQ6UXV0 394 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 C10orf126Q8N4M7 172 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 MDS2Q8NDY4 140 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 DYNLRB1Q9NP97 96 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 SLC25A15Q9Y619 301 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 CREBBPQ92793 2442 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 IGKV3-7A0A075B6H7 116 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 SMIM2Q9BVW6 85 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 TEX22C9J3V5 150 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 F5H697 171 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 K7EIM0 57 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 M0QXV9 152 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 CFC1BP0CG36 223 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 CFC1P0CG37 223 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 FAM27E3Q08E93 113 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 FOXC1Q12948 553 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 LINC01559Q495D7 138 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 FDCSPQ8NFU4 85 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 ATMQ13315 3056 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 ZZEF1O43149 2961 aa7.88□□□□□ -1.15
CLDN1-201ENST00000295522 BRI3O95415 125 aa7.87□□□□□ -1.15
CLDN1-201ENST00000295522 IGLV1-44P01699 117 aa7.87□□□□□ -1.15
CLDN1-201ENST00000295522 DOPEY2Q9Y3R5 2298 aa7.87□□□□□ -1.15
CLDN1-201ENST00000295522 A4D1N5 150 aa7.87□□□□□ -1.15
CLDN1-201ENST00000295522 MFAP4P55083 255 aa7.87□□□□□ -1.15
CLDN1-201ENST00000295522 PRSS33Q8NF86 280 aa7.87□□□□□ -1.15
CLDN1-201ENST00000295522 FAM57AQ8TBR7 257 aa7.87□□□□□ -1.15
CLDN1-201ENST00000295522 TIMD4Q96H15 378 aa7.87□□□□□ -1.15
CLDN1-201ENST00000295522 IGHV1-3A0A0C4DH29 117 aa7.87□□□□□ -1.15
CLDN1-201ENST00000295522 TRBV6-1A0A0K0K1D8 114 aa7.87□□□□□ -1.15
CLDN1-201ENST00000295522 CEACAM4O75871 244 aa7.87□□□□□ -1.15
CLDN1-201ENST00000295522 IGHV1-8P0DP01 117 aa7.87□□□□□ -1.15
CLDN1-201ENST00000295522 UBE2D3P61077 147 aa7.87□□□□□ -1.15
CLDN1-201ENST00000295522 UBE2D2P62837 147 aa7.87□□□□□ -1.15
CLDN1-201ENST00000295522 DEFB109BQ30KR1 87 aa7.87□□□□□ -1.15
CLDN1-201ENST00000295522 ORMDL2Q53FV1 153 aa7.87□□□□□ -1.15
CLDN1-201ENST00000295522 C2orf82Q6UX34 121 aa7.87□□□□□ -1.15
CLDN1-201ENST00000295522 BAALCQ8WXS3 180 aa7.87□□□□□ -1.15
CLDN1-201ENST00000295522 UBE2D1P51668 147 aa7.86□□□□□ -1.15
CLDN1-201ENST00000295522 SUMO2P61956 95 aaKnown RBP7.86□□□□□ -1.15
CLDN1-201ENST00000295522 ADIPOQQ15848 244 aa7.86□□□□□ -1.15
CLDN1-201ENST00000295522 C1orf162Q8NEQ5 155 aaPredicted RBP7.86□□□□□ -1.15
CLDN1-201ENST00000295522 RASL10AQ92737 203 aa7.86□□□□□ -1.15
CLDN1-201ENST00000295522 DUX3Q96PT4 197 aa7.86□□□□□ -1.15
CLDN1-201ENST00000295522 UBTD1Q9HAC8 227 aa7.86□□□□□ -1.15
CLDN1-201ENST00000295522 C11orf86A6NJI1 115 aa7.86□□□□□ -1.15
CLDN1-201ENST00000295522 COL6A6A6NMZ7 2263 aa7.86□□□□□ -1.15
CLDN1-201ENST00000295522 ADARB2-AS1A8MUL3 147 aa7.86□□□□□ -1.15
CLDN1-201ENST00000295522 DUSP14O95147 198 aaKnown RBP7.86□□□□□ -1.15
CLDN1-201ENST00000295522 ATP5J2P56134 94 aa7.86□□□□□ -1.15
CLDN1-201ENST00000295522 TMEM30BQ3MIR4 351 aa7.86□□□□□ -1.15
CLDN1-201ENST00000295522 RAI1Q7Z5J4 1906 aaPredicted RBP7.86□□□□□ -1.15
CLDN1-201ENST00000295522 C21orf62Q9NYP8 219 aa7.86□□□□□ -1.15
CLDN1-201ENST00000295522 PHLDA3Q9Y5J5 127 aa7.86□□□□□ -1.15
CLDN1-201ENST00000295522 IGKV3D-20A0A0C4DH25 116 aa7.86□□□□□ -1.15
CLDN1-201ENST00000295522 SRD5A1P18405 259 aa7.86□□□□□ -1.15
CLDN1-201ENST00000295522 PDE6HQ13956 83 aa7.86□□□□□ -1.15
CLDN1-201ENST00000295522 OR10J6PQ8NGY7 276 aa7.86□□□□□ -1.15
CLDN1-201ENST00000295522 LYNX1G3V0Z9 82 aa7.85□□□□□ -1.15
CLDN1-201ENST00000295522 H3BMM0 161 aa7.85□□□□□ -1.15
CLDN1-201ENST00000295522 CD7P09564 240 aa7.85□□□□□ -1.15
CLDN1-201ENST00000295522 LYNX1P0DP58 116 aa7.85□□□□□ -1.15
CLDN1-201ENST00000295522 ASIPP42127 132 aa7.85□□□□□ -1.15
CLDN1-201ENST00000295522 UBE2WQ96B02 151 aa7.85□□□□□ -1.15
CLDN1-201ENST00000295522 DMXL1Q9Y485 3027 aa7.85□□□□□ -1.15
CLDN1-201ENST00000295522 TIMM23O14925 209 aa7.85□□□□□ -1.15
CLDN1-201ENST00000295522 RPL11P62913 178 aaKnown RBP7.85□□□□□ -1.15
CLDN1-201ENST00000295522 MRGPRG-AS1Q2M3A8 158 aa7.85□□□□□ -1.15
CLDN1-201ENST00000295522 ZNF474Q6S9Z5 364 aaPredicted RBP7.85□□□□□ -1.15
CLDN1-201ENST00000295522 NRACQ8N912 160 aa7.85□□□□□ -1.15
CLDN1-201ENST00000295522 C11orf21Q9P2W6 132 aa7.85□□□□□ -1.15
CLDN1-201ENST00000295522 A0A0J9YY99 117 aa7.84□□□□□ -1.15
CLDN1-201ENST00000295522 TNFRSF13BO14836 293 aaPredicted RBP7.84□□□□□ -1.15
CLDN1-201ENST00000295522 NOTCH3Q9UM47 2321 aa7.84□□□□□ -1.15
CLDN1-201ENST00000295522 IGLV2-18A0A075B6J9 118 aa7.84□□□□□ -1.15
CLDN1-201ENST00000295522 TRAV12-3A0A0B4J271 114 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms