RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 ZNF524Q96C55 264 aa12.76□□□□□ -0.37
SSRP1-202ENST00000293880 MYLKQ15746 1914 aa12.75□□□□□ -0.37
SSRP1-202ENST00000293880 IGKV2D-24A0A075B6R9 120 aa12.75□□□□□ -0.37
SSRP1-202ENST00000293880 IGHV2-70DA0A0C4DH43 119 aa12.75□□□□□ -0.37
SSRP1-202ENST00000293880 C22orf46C9J442 243 aa12.75□□□□□ -0.37
SSRP1-202ENST00000293880 TDRG1Q3Y452 100 aa12.75□□□□□ -0.37
SSRP1-202ENST00000293880 DEFB136Q30KP8 78 aa12.75□□□□□ -0.37
SSRP1-202ENST00000293880 RPL39LQ96EH5 51 aaKnown RBP12.75□□□□□ -0.37
SSRP1-202ENST00000293880 NCR3O14931 201 aa12.74□□□□□ -0.37
SSRP1-202ENST00000293880 APRG1Q8IVJ8 170 aa12.74□□□□□ -0.37
SSRP1-202ENST00000293880 TMEM190Q8WZ59 177 aa12.74□□□□□ -0.37
SSRP1-202ENST00000293880 ORMDL1Q9P0S3 153 aa12.74□□□□□ -0.37
SSRP1-202ENST00000293880 Q9H8V8 135 aa12.74□□□□□ -0.37
SSRP1-202ENST00000293880 LTAP01374 205 aa12.74□□□□□ -0.37
SSRP1-202ENST00000293880 HERVK_113P63121 156 aa12.73□□□□□ -0.37
SSRP1-202ENST00000293880 LINC00173Q6ZV60 143 aa12.73□□□□□ -0.37
SSRP1-202ENST00000293880 FREM3P0C091 2139 aa12.73□□□□□ -0.37
SSRP1-202ENST00000293880 DOCK6Q96HP0 2047 aa12.73□□□□□ -0.37
SSRP1-202ENST00000293880 DAND5Q8N907 189 aa12.73□□□□□ -0.37
SSRP1-202ENST00000293880 DOCK10Q96BY6 2186 aa12.73□□□□□ -0.37
SSRP1-202ENST00000293880 CR1LQ2VPA4 569 aa12.73□□□□□ -0.37
SSRP1-202ENST00000293880 C10orf91Q5T1B1 145 aa12.73□□□□□ -0.37
SSRP1-202ENST00000293880 F8VRH5 84 aa12.72□□□□□ -0.37
SSRP1-202ENST00000293880 UBE2BP63146 152 aa12.72□□□□□ -0.37
SSRP1-202ENST00000293880 IGLV10-54A0A075B6I4 117 aa12.72□□□□□ -0.37
SSRP1-202ENST00000293880 IGLL5B9A064 214 aa12.72□□□□□ -0.37
SSRP1-202ENST00000293880 IGLC1P0CG04 106 aa12.72□□□□□ -0.37
SSRP1-202ENST00000293880 SPRNQ5BIV9 151 aa12.72□□□□□ -0.37
SSRP1-202ENST00000293880 ZSWIM8A7E2V4 1837 aa12.72□□□□□ -0.37
SSRP1-202ENST00000293880 SPANXDQ9BXN6 97 aa12.72□□□□□ -0.37
SSRP1-202ENST00000293880 NDUFA4O00483 81 aa12.71□□□□□ -0.37
SSRP1-202ENST00000293880 LOXP28300 417 aaPredicted RBP12.71□□□□□ -0.37
SSRP1-202ENST00000293880 C15orf65H3BRN8 121 aa12.71□□□□□ -0.37
SSRP1-202ENST00000293880 POLEQ07864 2286 aa12.71□□□□□ -0.38
SSRP1-202ENST00000293880 HOXB4P17483 251 aaPredicted RBP12.71□□□□□ -0.38
SSRP1-202ENST00000293880 IGHV7-4-1A0A0J9YVY3 117 aa12.7□□□□□ -0.38
SSRP1-202ENST00000293880 TMEM14CQ9P0S9 112 aa12.7□□□□□ -0.38
SSRP1-202ENST00000293880 THSD7BQ9C0I4 1608 aa12.7□□□□□ -0.38
SSRP1-202ENST00000293880 A0A0B4J2C4 111 aa12.7□□□□□ -0.38
SSRP1-202ENST00000293880 ATOX1O00244 68 aa12.7□□□□□ -0.38
SSRP1-202ENST00000293880 COX7B2Q8TF08 81 aa12.7□□□□□ -0.38
SSRP1-202ENST00000293880 RITA1Q96K30 269 aa12.7□□□□□ -0.38
SSRP1-202ENST00000293880 FANCMQ8IYD8 2048 aa12.7□□□□□ -0.38
SSRP1-202ENST00000293880 ZNF493Q6ZR52 646 aa12.7□□□□□ -0.38
SSRP1-202ENST00000293880 C5orf38Q86SI9 138 aa12.7□□□□□ -0.38
SSRP1-202ENST00000293880 ESM1Q9NQ30 184 aa12.7□□□□□ -0.38
SSRP1-202ENST00000293880 LRRK1Q38SD2 2015 aa12.69□□□□□ -0.38
SSRP1-202ENST00000293880 MRPL53Q96EL3 112 aaKnown RBP12.69□□□□□ -0.38
SSRP1-202ENST00000293880 V9GYY9 64 aa12.69□□□□□ -0.38
SSRP1-202ENST00000293880 CRYGBP07316 175 aa12.69□□□□□ -0.38
SSRP1-202ENST00000293880 C17orf82Q86X59 251 aaPredicted RBP12.69□□□□□ -0.38
SSRP1-202ENST00000293880 KIF26BQ2KJY2 2108 aa12.69□□□□□ -0.38
SSRP1-202ENST00000293880 IGHV3-30P01768 117 aa12.69□□□□□ -0.38
SSRP1-202ENST00000293880 IGHV3-33P01772 117 aa12.69□□□□□ -0.38
SSRP1-202ENST00000293880 IGHV3-30-3P0DP02 117 aa12.69□□□□□ -0.38
SSRP1-202ENST00000293880 IGHV3-30-5P0DP03 117 aa12.69□□□□□ -0.38
SSRP1-202ENST00000293880 DEFB125Q8N687 156 aa12.69□□□□□ -0.38
SSRP1-202ENST00000293880 DOCK8Q8NF50 2099 aa12.69□□□□□ -0.38
SSRP1-202ENST00000293880 NUPR1O60356 82 aa12.69□□□□□ -0.38
SSRP1-202ENST00000293880 APOC4P55056 127 aa12.69□□□□□ -0.38
SSRP1-202ENST00000293880 ALPK2Q86TB3 2170 aa12.68□□□□□ -0.38
SSRP1-202ENST00000293880 PTH2Q96A98 100 aa12.68□□□□□ -0.38
SSRP1-202ENST00000293880 IGHV4OR15-8A0A075B7B6 117 aa12.68□□□□□ -0.38
SSRP1-202ENST00000293880 A0A087WW49 117 aa12.68□□□□□ -0.38
SSRP1-202ENST00000293880 FAM231DQ6ZW35 169 aa12.68□□□□□ -0.38
SSRP1-202ENST00000293880 TRAV4A0A0B4J268 109 aa12.67□□□□□ -0.38
SSRP1-202ENST00000293880 TTTY13Q9BZ97 58 aa12.67□□□□□ -0.38
SSRP1-202ENST00000293880 PROK2Q9HC23 129 aa12.67□□□□□ -0.38
SSRP1-202ENST00000293880 Q8TCH9 128 aa12.67□□□□□ -0.38
SSRP1-202ENST00000293880 LYPD6BQ8NI32 183 aa12.67□□□□□ -0.38
SSRP1-202ENST00000293880 IGLV3-9A0A075B6K5 115 aa12.67□□□□□ -0.38
SSRP1-202ENST00000293880 FOXI2Q6ZQN5 318 aa12.67□□□□□ -0.38
SSRP1-202ENST00000293880 CLEC2BQ92478 149 aa12.67□□□□□ -0.38
SSRP1-202ENST00000293880 SIP14410 1827 aa12.66□□□□□ -0.38
SSRP1-202ENST00000293880 LMO1P25800 156 aa12.66□□□□□ -0.38
SSRP1-202ENST00000293880 C1orf147Q96MC9 270 aaPredicted RBP12.66□□□□□ -0.38
SSRP1-202ENST00000293880 AKAP6Q13023 2319 aa12.66□□□□□ -0.38
SSRP1-202ENST00000293880 ZFP2Q6ZN57 461 aa12.66□□□□□ -0.38
SSRP1-202ENST00000293880 Q6ZS92 163 aa12.66□□□□□ -0.38
SSRP1-202ENST00000293880 SPANXCQ9NY87 97 aa12.66□□□□□ -0.38
SSRP1-202ENST00000293880 SLURP1P55000 103 aa12.65□□□□□ -0.38
SSRP1-202ENST00000293880 MP68P56378 58 aa12.65□□□□□ -0.38
SSRP1-202ENST00000293880 PRSS33Q8NF86 280 aa12.65□□□□□ -0.38
SSRP1-202ENST00000293880 DKK4Q9UBT3 224 aa12.65□□□□□ -0.38
SSRP1-202ENST00000293880 ZNF747Q9BV97 191 aa12.65□□□□□ -0.38
SSRP1-202ENST00000293880 ICOSQ9Y6W8 199 aa12.65□□□□□ -0.38
SSRP1-202ENST00000293880 RBAKDNA6NC62 111 aa12.65□□□□□ -0.38
SSRP1-202ENST00000293880 WFDC11Q8NEX6 87 aa12.65□□□□□ -0.38
SSRP1-202ENST00000293880 TRAV23DV6A0A075B6W5 121 aa12.65□□□□□ -0.38
SSRP1-202ENST00000293880 TIMM17AQ99595 171 aa12.65□□□□□ -0.38
SSRP1-202ENST00000293880 TICRRQ7Z2Z1 1910 aa12.65□□□□□ -0.39
SSRP1-202ENST00000293880 GPR179Q6PRD1 2367 aa12.64□□□□□ -0.39
SSRP1-202ENST00000293880 SIVA1O15304 175 aa12.64□□□□□ -0.39
SSRP1-202ENST00000293880 FOXI1Q12951 378 aa12.64□□□□□ -0.39
SSRP1-202ENST00000293880 E9PQ18 207 aa12.64□□□□□ -0.39
SSRP1-202ENST00000293880 PYGO2Q9BRQ0 406 aa12.64□□□□□ -0.39
SSRP1-202ENST00000293880 G3V4G9 280 aa12.64□□□□□ -0.39
SSRP1-202ENST00000293880 K7ENP7 123 aa12.64□□□□□ -0.39
SSRP1-202ENST00000293880 BUB3O43684 328 aa12.64□□□□□ -0.39
SSRP1-202ENST00000293880 FXYD2P54710 66 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms