RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 KLHL30-AS1Q8NEE0 82 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 PRSS3P2Q8NHM4 247 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 DUX3Q96PT4 197 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 TMEM160Q9NX00 188 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 PEMTQ9UBM1 199 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 NBPF19A0A087WUL8 3843 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 CKS2P33552 79 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 CACNG7P62955 275 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 PMCHL1Q16048 86 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 EBLN2Q6P2I7 272 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 TEX43Q6ZNM6 134 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 OR9G4Q8NGQ1 327 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 OR10AG1Q8NH19 301 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 DLX4Q92988 240 aaPredicted RBP7.17□□□□□ -1.26
TRIM55-201ENST00000276573 ODF3Q96PU9 254 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 C16orf95Q9H693 158 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 FASNP49327 2511 aaKnown RBP7.17□□□□□ -1.26
TRIM55-201ENST00000276573 IGHV1-24A0A0C4DH33 117 aa7.16□□□□□ -1.26
TRIM55-201ENST00000276573 SMKR1H3BMG3 65 aa7.16□□□□□ -1.26
TRIM55-201ENST00000276573 H3BVH4 76 aa7.16□□□□□ -1.26
TRIM55-201ENST00000276573 PPBPP02775 128 aa7.16□□□□□ -1.26
TRIM55-201ENST00000276573 HIST2H2BDQ6DRA6 164 aa7.16□□□□□ -1.26
TRIM55-201ENST00000276573 LOC389332A0A1B0GUA5 103 aa7.15□□□□□ -1.26
TRIM55-201ENST00000276573 GNRH2O43555 120 aa7.15□□□□□ -1.26
TRIM55-201ENST00000276573 IFI27P40305 119 aaPredicted RBP7.15□□□□□ -1.26
TRIM55-201ENST00000276573 LEPP41159 167 aa7.15□□□□□ -1.26
TRIM55-201ENST00000276573 ASIPP42127 132 aa7.15□□□□□ -1.26
TRIM55-201ENST00000276573 TDRG1Q3Y452 100 aa7.15□□□□□ -1.26
TRIM55-201ENST00000276573 SPANXN1Q5VSR9 72 aa7.15□□□□□ -1.26
TRIM55-201ENST00000276573 FA2HQ7L5A8 372 aa7.15□□□□□ -1.26
TRIM55-201ENST00000276573 SMIM15Q7Z3B0 74 aa7.15□□□□□ -1.26
TRIM55-201ENST00000276573 LINC01006Q8NI28 216 aa7.15□□□□□ -1.26
TRIM55-201ENST00000276573 ZNF418Q8TF45 676 aaPredicted RBP7.15□□□□□ -1.26
TRIM55-201ENST00000276573 SIGLEC8Q9NYZ4 499 aa7.15□□□□□ -1.26
TRIM55-201ENST00000276573 FLNAP21333 2647 aaKnown RBP7.15□□□□□ -1.26
TRIM55-201ENST00000276573 CCDC168Q8NDH2 2452 aa7.15□□□□□ -1.26
TRIM55-201ENST00000276573 DUSP14O95147 198 aaKnown RBP7.15□□□□□ -1.27
TRIM55-201ENST00000276573 NPYP01303 97 aa7.15□□□□□ -1.27
TRIM55-201ENST00000276573 MED14OSP0DP75 135 aa7.15□□□□□ -1.27
TRIM55-201ENST00000276573 CD28P10747 220 aa7.15□□□□□ -1.27
TRIM55-201ENST00000276573 BTF3P20290 206 aaKnown RBP7.15□□□□□ -1.27
TRIM55-201ENST00000276573 EVI2AP22794 236 aa7.15□□□□□ -1.27
TRIM55-201ENST00000276573 S100A4P26447 101 aaKnown RBP7.15□□□□□ -1.27
TRIM55-201ENST00000276573 SMR3AQ99954 134 aa7.15□□□□□ -1.27
TRIM55-201ENST00000276573 AP5S1Q9NUS5 200 aa7.15□□□□□ -1.27
TRIM55-201ENST00000276573 TIMM8BQ9Y5J9 83 aaPredicted RBP7.15□□□□□ -1.27
TRIM55-201ENST00000276573 GCN1Q92616 2671 aaKnown RBP7.14□□□□□ -1.27
TRIM55-201ENST00000276573 ITPR2Q14571 2701 aa7.14□□□□□ -1.27
TRIM55-201ENST00000276573 TRAV2A0A0B4J234 112 aa7.14□□□□□ -1.27
TRIM55-201ENST00000276573 C7orf71A4D174 169 aa7.14□□□□□ -1.27
TRIM55-201ENST00000276573 TCF21O43680 179 aa7.14□□□□□ -1.27
TRIM55-201ENST00000276573 GAS8-AS1O95177 125 aa7.14□□□□□ -1.27
TRIM55-201ENST00000276573 LEPROTL1O95214 131 aa7.14□□□□□ -1.27
TRIM55-201ENST00000276573 NCR2O95944 276 aa7.14□□□□□ -1.27
TRIM55-201ENST00000276573 IGKV3-20P01619 116 aa7.14□□□□□ -1.27
TRIM55-201ENST00000276573 DDTP30046 118 aa7.14□□□□□ -1.27
TRIM55-201ENST00000276573 FOXI2Q6ZQN5 318 aa7.14□□□□□ -1.27
TRIM55-201ENST00000276573 LINC00173Q6ZV60 143 aa7.14□□□□□ -1.27
TRIM55-201ENST00000276573 RAX2Q96IS3 184 aa7.14□□□□□ -1.27
TRIM55-201ENST00000276573 SCRT2Q9NQ03 307 aa7.14□□□□□ -1.27
TRIM55-201ENST00000276573 ZNF469Q96JG9 3925 aaPredicted RBP7.14□□□□□ -1.27
TRIM55-201ENST00000276573 TRAV12-3A0A0B4J271 114 aa7.13□□□□□ -1.27
TRIM55-201ENST00000276573 LY6G6DO95868 133 aa7.13□□□□□ -1.27
TRIM55-201ENST00000276573 RNASE3P12724 160 aaKnown RBP7.13□□□□□ -1.27
TRIM55-201ENST00000276573 HILS1P60008 231 aa7.13□□□□□ -1.27
TRIM55-201ENST00000276573 DEFB114Q30KQ6 69 aa7.13□□□□□ -1.27
TRIM55-201ENST00000276573 FAM159AQ6UWV7 190 aa7.13□□□□□ -1.27
TRIM55-201ENST00000276573 C11orf44Q8N8P7 122 aa7.13□□□□□ -1.27
TRIM55-201ENST00000276573 TMEM70Q9BUB7 260 aa7.13□□□□□ -1.27
TRIM55-201ENST00000276573 LAMTOR2Q9Y2Q5 125 aa7.13□□□□□ -1.27
TRIM55-201ENST00000276573 UNC79Q9P2D8 2635 aa7.13□□□□□ -1.27
TRIM55-201ENST00000276573 TLN2Q9Y4G6 2542 aa7.13□□□□□ -1.27
TRIM55-201ENST00000276573 KIR2DL5BA0A0G2JN68 375 aa7.13□□□□□ -1.27
TRIM55-201ENST00000276573 KIR2DL5BA0A0G2JPC4 375 aa7.13□□□□□ -1.27
TRIM55-201ENST00000276573 SPRY2O43597 315 aa7.13□□□□□ -1.27
TRIM55-201ENST00000276573 TNFRSF6BO95407 300 aa7.13□□□□□ -1.27
TRIM55-201ENST00000276573 GATA1P15976 413 aaPredicted RBP7.13□□□□□ -1.27
TRIM55-201ENST00000276573 TSPOP30536 169 aa7.13□□□□□ -1.27
TRIM55-201ENST00000276573 TMEM61Q8N0U2 210 aa7.13□□□□□ -1.27
TRIM55-201ENST00000276573 KIR2DL5AQ8N109 375 aa7.13□□□□□ -1.27
TRIM55-201ENST00000276573 PHLDA3Q9Y5J5 127 aa7.13□□□□□ -1.27
TRIM55-201ENST00000276573 A0A1W2PRX2 142 aa7.12□□□□□ -1.27
TRIM55-201ENST00000276573 CCL24O00175 119 aa7.12□□□□□ -1.27
TRIM55-201ENST00000276573 CDKN1BP46527 198 aa7.12□□□□□ -1.27
TRIM55-201ENST00000276573 DEFB131AP59861 70 aa7.12□□□□□ -1.27
TRIM55-201ENST00000276573 FHL3Q13643 280 aa7.12□□□□□ -1.27
TRIM55-201ENST00000276573 AMTNQ6UX39 209 aa7.12□□□□□ -1.27
TRIM55-201ENST00000276573 DYNLRB2Q8TF09 96 aa7.12□□□□□ -1.27
TRIM55-201ENST00000276573 CITED2Q99967 270 aaPredicted RBP7.12□□□□□ -1.27
TRIM55-201ENST00000276573 VAMP8Q9BV40 100 aa7.12□□□□□ -1.27
TRIM55-201ENST00000276573 MAP1LC3AQ9H492 121 aa7.12□□□□□ -1.27
TRIM55-201ENST00000276573 TSSC4Q9Y5U2 329 aaPredicted RBP7.12□□□□□ -1.27
TRIM55-201ENST00000276573 SONP18583 2426 aaKnown RBP7.11□□□□□ -1.27
TRIM55-201ENST00000276573 KNCNA6PVL3 124 aa7.11□□□□□ -1.27
TRIM55-201ENST00000276573 SYS1-DBNDD2H3BUS1 97 aa7.11□□□□□ -1.27
TRIM55-201ENST00000276573 M0R381 172 aa7.11□□□□□ -1.27
TRIM55-201ENST00000276573 CRXO43186 299 aaPredicted RBP7.11□□□□□ -1.27
TRIM55-201ENST00000276573 SPATA12Q7Z6I5 190 aa7.11□□□□□ -1.27
TRIM55-201ENST00000276573 C20orf144Q9BQM9 153 aa7.11□□□□□ -1.27
TRIM55-201ENST00000276573 HSPB8Q9UJY1 196 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms