RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 RITA1Q96K30 269 aa9.1□□□□□ -0.95
VPS33A-201ENST00000267199 H3BUX3 64 aa9.09□□□□□ -0.95
VPS33A-201ENST00000267199 K7ENP7 123 aa9.09□□□□□ -0.95
VPS33A-201ENST00000267199 IGLV2-8P01709 118 aa9.09□□□□□ -0.95
VPS33A-201ENST00000267199 LINC00322Q6ZN03 302 aaPredicted RBP9.09□□□□□ -0.95
VPS33A-201ENST00000267199 LINC00477Q96M19 166 aa9.09□□□□□ -0.95
VPS33A-201ENST00000267199 OR11H6Q8NGC7 330 aa9.09□□□□□ -0.95
VPS33A-201ENST00000267199 SS18L2Q9UHA2 77 aa9.09□□□□□ -0.95
VPS33A-201ENST00000267199 TNRC6AQ8NDV7 1962 aaKnown RBP9.09□□□□□ -0.95
VPS33A-201ENST00000267199 YAE1D1Q9NRH1 226 aa9.09□□□□□ -0.96
VPS33A-201ENST00000267199 PRSS33Q8NF86 280 aa9.08□□□□□ -0.96
VPS33A-201ENST00000267199 SORL1Q92673 2214 aa9.08□□□□□ -0.96
VPS33A-201ENST00000267199 TRBV7-1A0A0A6YYK4 115 aa9.08□□□□□ -0.96
VPS33A-201ENST00000267199 DAZAP2Q15038 168 aaPredicted RBP9.08□□□□□ -0.96
VPS33A-201ENST00000267199 TIMM21Q9BVV7 248 aa9.08□□□□□ -0.96
VPS33A-201ENST00000267199 SHISA9B4DS77 424 aa9.08□□□□□ -0.96
VPS33A-201ENST00000267199 IGKV1-17P01599 117 aa9.08□□□□□ -0.96
VPS33A-201ENST00000267199 DYNAPQ8N1N2 210 aa9.08□□□□□ -0.96
VPS33A-201ENST00000267199 TMEM101Q96IK0 257 aa9.08□□□□□ -0.96
VPS33A-201ENST00000267199 MYO18BQ8IUG5 2567 aa9.07□□□□□ -0.96
VPS33A-201ENST00000267199 A0A087WX48 190 aa9.07□□□□□ -0.96
VPS33A-201ENST00000267199 KNCNA6PVL3 124 aa9.07□□□□□ -0.96
VPS33A-201ENST00000267199 ADARB2-AS1A8MUL3 147 aa9.07□□□□□ -0.96
VPS33A-201ENST00000267199 SLC25A20O43772 301 aa9.07□□□□□ -0.96
VPS33A-201ENST00000267199 GRNP28799 593 aaKnown RBP9.07□□□□□ -0.96
VPS33A-201ENST00000267199 CR1LQ2VPA4 569 aa9.07□□□□□ -0.96
VPS33A-201ENST00000267199 BOD1L2Q8IYS8 172 aa9.07□□□□□ -0.96
VPS33A-201ENST00000267199 NTN5Q8WTR8 489 aaPredicted RBP9.07□□□□□ -0.96
VPS33A-201ENST00000267199 PRO1854Q9UHT4 67 aa9.07□□□□□ -0.96
VPS33A-201ENST00000267199 FOXI2Q6ZQN5 318 aa9.07□□□□□ -0.96
VPS33A-201ENST00000267199 SDHAF1A6NFY7 115 aa9.07□□□□□ -0.96
VPS33A-201ENST00000267199 G3V4G9 280 aa9.07□□□□□ -0.96
VPS33A-201ENST00000267199 C8orf86Q6ZUL3 223 aa9.07□□□□□ -0.96
VPS33A-201ENST00000267199 PHLDA1Q8WV24 401 aaPredicted RBP9.07□□□□□ -0.96
VPS33A-201ENST00000267199 RHPN1-AS1Q9BWJ2 59 aa9.07□□□□□ -0.96
VPS33A-201ENST00000267199 C5orf42Q9H799 3197 aa9.06□□□□□ -0.96
VPS33A-201ENST00000267199 PRSS29PA6NIE9 313 aa9.06□□□□□ -0.96
VPS33A-201ENST00000267199 C8orf31Q8N9H6 132 aa9.06□□□□□ -0.96
VPS33A-201ENST00000267199 OVOL3O00110 214 aa9.06□□□□□ -0.96
VPS33A-201ENST00000267199 FOXE3Q13461 319 aa9.06□□□□□ -0.96
VPS33A-201ENST00000267199 PMVKQ15126 192 aa9.06□□□□□ -0.96
VPS33A-201ENST00000267199 KLHL30-AS1Q8NEE0 82 aa9.06□□□□□ -0.96
VPS33A-201ENST00000267199 CCDC168Q8NDH2 2452 aa9.06□□□□□ -0.96
VPS33A-201ENST00000267199 H3BMM0 161 aa9.06□□□□□ -0.96
VPS33A-201ENST00000267199 CGB3P0DN86 165 aa9.06□□□□□ -0.96
VPS33A-201ENST00000267199 CGB7P0DN87 165 aa9.06□□□□□ -0.96
VPS33A-201ENST00000267199 TAL2Q16559 108 aa9.06□□□□□ -0.96
VPS33A-201ENST00000267199 FAM110DQ8TAY7 271 aaPredicted RBP9.06□□□□□ -0.96
VPS33A-201ENST00000267199 CFHR4Q92496 578 aa9.06□□□□□ -0.96
VPS33A-201ENST00000267199 UBE2WQ96B02 151 aa9.06□□□□□ -0.96
VPS33A-201ENST00000267199 C1QTNF4Q9BXJ3 329 aa9.06□□□□□ -0.96
VPS33A-201ENST00000267199 EDA2RQ9HAV5 297 aa9.06□□□□□ -0.96
VPS33A-201ENST00000267199 RUSC1-AS1Q66K80 236 aa9.05□□□□□ -0.96
VPS33A-201ENST00000267199 C1orf229Q6ZS94 237 aaPredicted RBP9.05□□□□□ -0.96
VPS33A-201ENST00000267199 ZNF48Q96MX3 618 aaPredicted RBP9.05□□□□□ -0.96
VPS33A-201ENST00000267199 CHD7Q9P2D1 2997 aa9.05□□□□□ -0.96
VPS33A-201ENST00000267199 SONP18583 2426 aaKnown RBP9.05□□□□□ -0.96
VPS33A-201ENST00000267199 UBE2E1P51965 193 aa9.05□□□□□ -0.96
VPS33A-201ENST00000267199 C1orf159Q96HA4 380 aa9.05□□□□□ -0.96
VPS33A-201ENST00000267199 AGPAT4-IT1Q9H0P7 198 aa9.05□□□□□ -0.96
VPS33A-201ENST00000267199 TRGV2A0A075B6R0 118 aa9.05□□□□□ -0.96
VPS33A-201ENST00000267199 LINC00310P59036 64 aa9.05□□□□□ -0.96
VPS33A-201ENST00000267199 TRAV13-1A0A0B4J241 112 aa9.04□□□□□ -0.96
VPS33A-201ENST00000267199 HIST1H4AP62805 103 aaKnown RBP9.04□□□□□ -0.96
VPS33A-201ENST00000267199 GATD1Q8NB37 220 aa9.04□□□□□ -0.96
VPS33A-201ENST00000267199 HTTP42858 3142 aa9.04□□□□□ -0.96
VPS33A-201ENST00000267199 A0A1B0GXF2 115 aa9.04□□□□□ -0.96
VPS33A-201ENST00000267199 GNLYP22749 145 aa9.04□□□□□ -0.96
VPS33A-201ENST00000267199 LINC00158P58513 81 aa9.04□□□□□ -0.96
VPS33A-201ENST00000267199 EIF4EBP1Q13541 118 aaPredicted RBP9.04□□□□□ -0.96
VPS33A-201ENST00000267199 TRAV26-1A0A087WT03 109 aa9.04□□□□□ -0.96
VPS33A-201ENST00000267199 J3QQQ9 107 aa9.04□□□□□ -0.96
VPS33A-201ENST00000267199 K7EIM0 57 aa9.04□□□□□ -0.96
VPS33A-201ENST00000267199 GAGE2AQ6NT46 116 aa9.04□□□□□ -0.96
VPS33A-201ENST00000267199 PTH2Q96A98 100 aa9.04□□□□□ -0.96
VPS33A-201ENST00000267199 ATG2AQ2TAZ0 1938 aa9.03□□□□□ -0.96
VPS33A-201ENST00000267199 C9orf153Q5TBE3 101 aa9.03□□□□□ -0.96
VPS33A-201ENST00000267199 LY6G5BQ8NDX9 201 aa9.03□□□□□ -0.96
VPS33A-201ENST00000267199 C11orf68Q9H3H3 251 aaKnown RBP9.03□□□□□ -0.96
VPS33A-201ENST00000267199 F6UB75 175 aa9.03□□□□□ -0.96
VPS33A-201ENST00000267199 MORN3Q6PF18 240 aaPredicted RBP9.03□□□□□ -0.96
VPS33A-201ENST00000267199 ANKRD11Q6UB99 2663 aaPredicted RBP9.03□□□□□ -0.96
VPS33A-201ENST00000267199 TRGV11A0A075B6L2 103 aa9.03□□□□□ -0.96
VPS33A-201ENST00000267199 I3L2K1 104 aa9.03□□□□□ -0.96
VPS33A-201ENST00000267199 IGHV3-53P01767 116 aa9.03□□□□□ -0.96
VPS33A-201ENST00000267199 IFITM1P13164 125 aa9.03□□□□□ -0.96
VPS33A-201ENST00000267199 RNASE13Q5GAN3 156 aaKnown RBP9.03□□□□□ -0.96
VPS33A-201ENST00000267199 PRSS22Q9GZN4 317 aa9.03□□□□□ -0.96
VPS33A-201ENST00000267199 KLK9Q9UKQ9 250 aa9.03□□□□□ -0.96
VPS33A-201ENST00000267199 MSRB2Q9Y3D2 182 aa9.03□□□□□ -0.96
VPS33A-201ENST00000267199 C19orf71A6NCJ1 209 aa9.02□□□□□ -0.96
VPS33A-201ENST00000267199 DUSP14O95147 198 aaKnown RBP9.02□□□□□ -0.96
VPS33A-201ENST00000267199 RPL39LQ96EH5 51 aaKnown RBP9.02□□□□□ -0.96
VPS33A-201ENST00000267199 SPAG8Q99932 426 aaPredicted RBP9.02□□□□□ -0.96
VPS33A-201ENST00000267199 C22orf34Q6ZV56 151 aa9.02□□□□□ -0.97
VPS33A-201ENST00000267199 PRIMA1Q86XR5 153 aa9.02□□□□□ -0.97
VPS33A-201ENST00000267199 C11orf44Q8N8P7 122 aa9.02□□□□□ -0.97
VPS33A-201ENST00000267199 TRAV12-2A0A075B6T6 113 aa9.02□□□□□ -0.97
VPS33A-201ENST00000267199 IGLV2-23P01705 113 aa9.02□□□□□ -0.97
VPS33A-201ENST00000267199 C15orf53Q8NAA6 179 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 205.8 ms