RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 IGKV3D-20A0A0C4DH25 116 aa11.9□□□□□ -0.5
CHCHD3-201ENST00000262570 ZNF727A8MUV8 499 aa11.9□□□□□ -0.5
CHCHD3-201ENST00000262570 GNRH2O43555 120 aa11.9□□□□□ -0.5
CHCHD3-201ENST00000262570 MGST1P10620 155 aaKnown RBP11.9□□□□□ -0.5
CHCHD3-201ENST00000262570 IBA57Q5T440 356 aaKnown RBP11.9□□□□□ -0.5
CHCHD3-201ENST00000262570 PRR27Q6MZM9 219 aa11.9□□□□□ -0.5
CHCHD3-201ENST00000262570 SDF2L1Q9HCN8 221 aa11.9□□□□□ -0.5
CHCHD3-201ENST00000262570 TRGV11A0A075B6L2 103 aa11.89□□□□□ -0.51
CHCHD3-201ENST00000262570 TYMSP04818 313 aa11.89□□□□□ -0.51
CHCHD3-201ENST00000262570 FAM74A3Q4VXF1 159 aa11.89□□□□□ -0.51
CHCHD3-201ENST00000262570 GSN-AS1Q9NRJ2 163 aa11.89□□□□□ -0.51
CHCHD3-201ENST00000262570 DKK2Q9UBU2 259 aa11.89□□□□□ -0.51
CHCHD3-201ENST00000262570 TIMM8BQ9Y5J9 83 aaPredicted RBP11.89□□□□□ -0.51
CHCHD3-201ENST00000262570 LY96Q9Y6Y9 160 aa11.89□□□□□ -0.51
CHCHD3-201ENST00000262570 LINC00862A6NCI5 91 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 K7EN84 100 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 ORM1P02763 201 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 LINC01559Q495D7 138 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 ZNF575Q86XF7 245 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 BIN3Q9NQY0 253 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 MDFICQ9P1T7 246 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 CELA1Q9UNI1 258 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 DNAH7Q8WXX0 4024 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 IGHV3-16A0A0C4DH30 117 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 C19orf71A6NCJ1 209 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 SNURFLB1AK76 121 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 KRBOX1C9JBD0 128 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 SPART-AS1P0CW21 52 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 TCL1AP56279 114 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 DAZ2Q13117 558 aaKnown RBP11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 OR5I1Q13606 314 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 SOHLH1Q5JUK2 328 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 FAM222AQ5U5X8 452 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 IL17DQ8TAD2 202 aa11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 NOP10Q9NPE3 64 aaKnown RBP11.88□□□□□ -0.51
CHCHD3-201ENST00000262570 CXorf65A6NEN9 183 aa11.87□□□□□ -0.51
CHCHD3-201ENST00000262570 LYRM9A8MSI8 78 aa11.87□□□□□ -0.51
CHCHD3-201ENST00000262570 B4DEV8 164 aa11.87□□□□□ -0.51
CHCHD3-201ENST00000262570 M0R036 132 aa11.87□□□□□ -0.51
CHCHD3-201ENST00000262570 UQCC3Q6UW78 93 aa11.87□□□□□ -0.51
CHCHD3-201ENST00000262570 C11orf45Q8TAV5 145 aa11.87□□□□□ -0.51
CHCHD3-201ENST00000262570 WWC2-AS2Q96NR7 200 aa11.87□□□□□ -0.51
CHCHD3-201ENST00000262570 TEX48A0A1B0GUV7 120 aa11.86□□□□□ -0.51
CHCHD3-201ENST00000262570 SFTA3P0C7M3 94 aa11.86□□□□□ -0.51
CHCHD3-201ENST00000262570 ZNF415Q09FC8 603 aa11.86□□□□□ -0.51
CHCHD3-201ENST00000262570 TMEM241Q24JQ0 296 aa11.86□□□□□ -0.51
CHCHD3-201ENST00000262570 LINC01551Q86U37 167 aa11.86□□□□□ -0.51
CHCHD3-201ENST00000262570 COMMD7Q86VX2 200 aa11.86□□□□□ -0.51
CHCHD3-201ENST00000262570 DAZAP1Q96EP5 407 aaKnown RBP11.86□□□□□ -0.51
CHCHD3-201ENST00000262570 NANOS2P60321 138 aaKnown RBP11.84□□□□□ -0.51
CHCHD3-201ENST00000262570 RPL19P84098 196 aaKnown RBP11.84□□□□□ -0.51
CHCHD3-201ENST00000262570 C12orf74Q32Q52 190 aa11.84□□□□□ -0.51
CHCHD3-201ENST00000262570 DNLZQ5SXM8 178 aa11.84□□□□□ -0.51
CHCHD3-201ENST00000262570 NAT8Q9UHE5 227 aa11.84□□□□□ -0.51
CHCHD3-201ENST00000262570 TMSB15BA0A087X1C1 80 aa11.84□□□□□ -0.51
CHCHD3-201ENST00000262570 SPINK4O60575 86 aa11.84□□□□□ -0.51
CHCHD3-201ENST00000262570 P01737 135 aa11.84□□□□□ -0.51
CHCHD3-201ENST00000262570 RNASE3P12724 160 aaKnown RBP11.84□□□□□ -0.51
CHCHD3-201ENST00000262570 LINC00612Q8N6U2 182 aa11.84□□□□□ -0.51
CHCHD3-201ENST00000262570 NUDT10Q8NFP7 164 aa11.84□□□□□ -0.51
CHCHD3-201ENST00000262570 NUDT11Q96G61 164 aa11.84□□□□□ -0.51
CHCHD3-201ENST00000262570 SPXQ9BT56 116 aa11.84□□□□□ -0.51
CHCHD3-201ENST00000262570 GRIFINA4D1Z8 144 aa11.83□□□□□ -0.52
CHCHD3-201ENST00000262570 ASIPP42127 132 aa11.83□□□□□ -0.52
CHCHD3-201ENST00000262570 RPL23P62829 140 aaKnown RBP11.83□□□□□ -0.52
CHCHD3-201ENST00000262570 LGALS9BQ3B8N2 356 aa11.83□□□□□ -0.52
CHCHD3-201ENST00000262570 C9orf85Q96MD7 179 aa11.83□□□□□ -0.52
CHCHD3-201ENST00000262570 RNASE7Q9H1E1 156 aaKnown RBP11.83□□□□□ -0.52
CHCHD3-201ENST00000262570 CXCL1P09341 107 aa11.82□□□□□ -0.52
CHCHD3-201ENST00000262570 S100A4P26447 101 aaKnown RBP11.82□□□□□ -0.52
CHCHD3-201ENST00000262570 Q6ZTI0 123 aa11.82□□□□□ -0.52
CHCHD3-201ENST00000262570 FAM231DQ6ZW35 169 aa11.82□□□□□ -0.52
CHCHD3-201ENST00000262570 IL36BQ9NZH7 164 aa11.82□□□□□ -0.52
CHCHD3-201ENST00000262570 TRGV1A0A0A0MS02 117 aa11.81□□□□□ -0.52
CHCHD3-201ENST00000262570 TMEM218A2RU14 115 aa11.81□□□□□ -0.52
CHCHD3-201ENST00000262570 DEFB130BP0DP73 79 aa11.81□□□□□ -0.52
CHCHD3-201ENST00000262570 DEFB130AP0DP74 79 aa11.81□□□□□ -0.52
CHCHD3-201ENST00000262570 DAD1P61803 113 aa11.81□□□□□ -0.52
CHCHD3-201ENST00000262570 Q6ZTC4 211 aa11.81□□□□□ -0.52
CHCHD3-201ENST00000262570 OR2D3Q8NGH3 330 aa11.81□□□□□ -0.52
CHCHD3-201ENST00000262570 M0R2P5 195 aa11.8□□□□□ -0.52
CHCHD3-201ENST00000262570 ARMS2P0C7Q2 107 aa11.8□□□□□ -0.52
CHCHD3-201ENST00000262570 RASL10AQ92737 203 aa11.8□□□□□ -0.52
CHCHD3-201ENST00000262570 ISOC2Q96AB3 205 aa11.8□□□□□ -0.52
CHCHD3-201ENST00000262570 GAGE12BA1L429 117 aa11.79□□□□□ -0.52
CHCHD3-201ENST00000262570 H3BVH4 76 aa11.79□□□□□ -0.52
CHCHD3-201ENST00000262570 GAGE7O76087 117 aa11.79□□□□□ -0.52
CHCHD3-201ENST00000262570 GAGE12FP0CL80 117 aa11.79□□□□□ -0.52
CHCHD3-201ENST00000262570 GAGE12GP0CL81 117 aa11.79□□□□□ -0.52
CHCHD3-201ENST00000262570 GAGE12IP0CL82 117 aa11.79□□□□□ -0.52
CHCHD3-201ENST00000262570 ERVFC1-1P60608 527 aa11.79□□□□□ -0.52
CHCHD3-201ENST00000262570 RPS20P60866 119 aaKnown RBP11.79□□□□□ -0.52
CHCHD3-201ENST00000262570 ADIRFQ15847 76 aa11.79□□□□□ -0.52
CHCHD3-201ENST00000262570 MUC7Q8TAX7 377 aa11.79□□□□□ -0.52
CHCHD3-201ENST00000262570 SCRT2Q9NQ03 307 aa11.79□□□□□ -0.52
CHCHD3-201ENST00000262570 MRPL16Q9NX20 251 aaKnown RBP11.79□□□□□ -0.52
CHCHD3-201ENST00000262570 CSMD3Q7Z407 3707 aa11.79□□□□□ -0.52
CHCHD3-201ENST00000262570 PTH2Q96A98 100 aa11.79□□□□□ -0.52
CHCHD3-201ENST00000262570 C18orf15Q96N68 181 aa11.79□□□□□ -0.52
CHCHD3-201ENST00000262570 RPP21Q9H633 154 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms