RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 PDZD2O15018 2839 aa11.2□□□□□ -0.62
MBD4-201ENST00000249910 F6UB75 175 aa11.2□□□□□ -0.62
MBD4-201ENST00000249910 TMEM78Q5T7P6 136 aa11.2□□□□□ -0.62
MBD4-201ENST00000249910 C11orf21Q9P2W6 132 aa11.2□□□□□ -0.62
MBD4-201ENST00000249910 KMT2BQ9UMN6 2715 aaPredicted RBP11.2□□□□□ -0.62
MBD4-201ENST00000249910 FASNP49327 2511 aaKnown RBP11.2□□□□□ -0.62
MBD4-201ENST00000249910 FABP5P3A8MUU1 101 aa11.19□□□□□ -0.62
MBD4-201ENST00000249910 M0R2Z0 102 aa11.19□□□□□ -0.62
MBD4-201ENST00000249910 CKS1BP61024 79 aa11.19□□□□□ -0.62
MBD4-201ENST00000249910 AMN1Q8IY45 258 aa11.19□□□□□ -0.62
MBD4-201ENST00000249910 PEF1Q9UBV8 284 aaKnown RBP11.19□□□□□ -0.62
MBD4-201ENST00000249910 VPREB3Q9UKI3 123 aa11.19□□□□□ -0.62
MBD4-201ENST00000249910 BRI3O95415 125 aa11.19□□□□□ -0.62
MBD4-201ENST00000249910 C3orf79P0CE67 100 aa11.19□□□□□ -0.62
MBD4-201ENST00000249910 FOXE3Q13461 319 aa11.19□□□□□ -0.62
MBD4-201ENST00000249910 HIST2H2BDQ6DRA6 164 aa11.19□□□□□ -0.62
MBD4-201ENST00000249910 NIPBLQ6KC79 2804 aaeCLIP11.19□□□□□ -0.62
MBD4-201ENST00000249910 TWIST1Q15672 202 aa11.18□□□□□ -0.62
MBD4-201ENST00000249910 Q6YL49 198 aa11.18□□□□□ -0.62
MBD4-201ENST00000249910 FER1L6-AS1Q8NA97 138 aa11.18□□□□□ -0.62
MBD4-201ENST00000249910 DAZ1Q9NQZ3 744 aaKnown RBP11.18□□□□□ -0.62
MBD4-201ENST00000249910 TIMM8BQ9Y5J9 83 aaPredicted RBP11.18□□□□□ -0.62
MBD4-201ENST00000249910 WNK1Q9H4A3 2382 aa11.18□□□□□ -0.62
MBD4-201ENST00000249910 GCN1Q92616 2671 aaKnown RBP11.18□□□□□ -0.62
MBD4-201ENST00000249910 IGKV3D-20A0A0C4DH25 116 aa11.18□□□□□ -0.62
MBD4-201ENST00000249910 FAM181BA6NEQ2 426 aa11.18□□□□□ -0.62
MBD4-201ENST00000249910 H0Y8G0 127 aa11.18□□□□□ -0.62
MBD4-201ENST00000249910 SPATA45Q537H7 98 aa11.18□□□□□ -0.62
MBD4-201ENST00000249910 BORCS7Q96B45 105 aa11.18□□□□□ -0.62
MBD4-201ENST00000249910 RBAKDNA6NC62 111 aa11.17□□□□□ -0.62
MBD4-201ENST00000249910 FSHBP01225 129 aa11.17□□□□□ -0.62
MBD4-201ENST00000249910 AZU1P20160 251 aa11.17□□□□□ -0.62
MBD4-201ENST00000249910 WFDC3Q8IUB2 231 aa11.17□□□□□ -0.62
MBD4-201ENST00000249910 ATOH7Q8N100 152 aa11.17□□□□□ -0.62
MBD4-201ENST00000249910 Q8N976 141 aa11.17□□□□□ -0.62
MBD4-201ENST00000249910 FBLL1A6NHQ2 334 aaKnown RBP11.17□□□□□ -0.62
MBD4-201ENST00000249910 KIR3DS1Q14943 382 aa11.17□□□□□ -0.62
MBD4-201ENST00000249910 PRR9Q5T870 116 aa11.17□□□□□ -0.62
MBD4-201ENST00000249910 Q6AWC8 147 aa11.17□□□□□ -0.62
MBD4-201ENST00000249910 EBLN2Q6P2I7 272 aa11.17□□□□□ -0.62
MBD4-201ENST00000249910 IGHV7-4-1A0A0J9YVY3 117 aa11.16□□□□□ -0.62
MBD4-201ENST00000249910 TSPOP30536 169 aa11.16□□□□□ -0.62
MBD4-201ENST00000249910 LINC00173Q6ZV60 143 aa11.16□□□□□ -0.62
MBD4-201ENST00000249910 DPF1Q92782 380 aa11.16□□□□□ -0.62
MBD4-201ENST00000249910 D6R8Y8 96 aa11.16□□□□□ -0.62
MBD4-201ENST00000249910 SOCS3O14543 225 aa11.16□□□□□ -0.62
MBD4-201ENST00000249910 PSMG3-AS1Q96PY0 264 aa11.16□□□□□ -0.62
MBD4-201ENST00000249910 LOC389332A0A1B0GUA5 103 aa11.15□□□□□ -0.62
MBD4-201ENST00000249910 SMKR1H3BMG3 65 aa11.15□□□□□ -0.62
MBD4-201ENST00000249910 IGLC6P0CF74 106 aa11.15□□□□□ -0.62
MBD4-201ENST00000249910 C9orf47Q6ZRZ4 202 aa11.15□□□□□ -0.62
MBD4-201ENST00000249910 C9orf139Q6ZV77 190 aa11.15□□□□□ -0.62
MBD4-201ENST00000249910 LRRC75A-AS1Q8N1F1 130 aa11.15□□□□□ -0.62
MBD4-201ENST00000249910 ZNF702PQ9H963 129 aa11.15□□□□□ -0.62
MBD4-201ENST00000249910 SPRY2O43597 315 aa11.15□□□□□ -0.62
MBD4-201ENST00000249910 FAM106AQ4KMX7 169 aa11.15□□□□□ -0.62
MBD4-201ENST00000249910 SIGMAR1Q99720 223 aa11.15□□□□□ -0.62
MBD4-201ENST00000249910 IGHV1-24A0A0C4DH33 117 aa11.14□□□□□ -0.63
MBD4-201ENST00000249910 GAS8-AS1O95177 125 aa11.14□□□□□ -0.63
MBD4-201ENST00000249910 AMMECR1LQ6DCA0 310 aa11.14□□□□□ -0.63
MBD4-201ENST00000249910 KLHDC1Q8N7A1 406 aa11.14□□□□□ -0.63
MBD4-201ENST00000249910 FAM110AQ9BQ89 295 aa11.14□□□□□ -0.63
MBD4-201ENST00000249910 SPXQ9BT56 116 aa11.14□□□□□ -0.63
MBD4-201ENST00000249910 SYNJ2BPP57105 145 aa11.14□□□□□ -0.63
MBD4-201ENST00000249910 HERV-K104P63124 156 aa11.14□□□□□ -0.63
MBD4-201ENST00000249910 HIST1H1AQ02539 215 aaPredicted RBP11.14□□□□□ -0.63
MBD4-201ENST00000249910 FAM104BQ5XKR9 115 aa11.14□□□□□ -0.63
MBD4-201ENST00000249910 ZNF493Q6ZR52 646 aa11.14□□□□□ -0.63
MBD4-201ENST00000249910 NCR2O95944 276 aa11.13□□□□□ -0.63
MBD4-201ENST00000249910 SMAGPQ0VAQ4 97 aa11.13□□□□□ -0.63
MBD4-201ENST00000249910 LINC01559Q495D7 138 aa11.13□□□□□ -0.63
MBD4-201ENST00000249910 PET117Q6UWS5 81 aa11.13□□□□□ -0.63
MBD4-201ENST00000249910 C18orf65Q6ZTR6 163 aa11.13□□□□□ -0.63
MBD4-201ENST00000249910 MRPL53Q96EL3 112 aaKnown RBP11.13□□□□□ -0.63
MBD4-201ENST00000249910 MCRIP2Q9BUT9 160 aaKnown RBP11.13□□□□□ -0.63
MBD4-201ENST00000249910 C2orf70A6NJV1 201 aa11.13□□□□□ -0.63
MBD4-201ENST00000249910 TAX1BP3O14907 124 aa11.13□□□□□ -0.63
MBD4-201ENST00000249910 IFI27P40305 119 aaPredicted RBP11.13□□□□□ -0.63
MBD4-201ENST00000249910 FXYD7P58549 80 aa11.13□□□□□ -0.63
MBD4-201ENST00000249910 DEFB136Q30KP8 78 aa11.13□□□□□ -0.63
MBD4-201ENST00000249910 TCTEX1D4Q5JR98 221 aa11.13□□□□□ -0.63
MBD4-201ENST00000249910 ERASQ7Z444 233 aa11.13□□□□□ -0.63
MBD4-201ENST00000249910 SPATA12Q7Z6I5 190 aa11.13□□□□□ -0.63
MBD4-201ENST00000249910 AGRNO00468 2067 aa11.13□□□□□ -0.63
MBD4-201ENST00000249910 A0A1B0GW15 77 aa11.12□□□□□ -0.63
MBD4-201ENST00000249910 TSPAN13O95857 204 aa11.12□□□□□ -0.63
MBD4-201ENST00000249910 MRPL51Q4U2R6 128 aaKnown RBP11.12□□□□□ -0.63
MBD4-201ENST00000249910 OR10AG1Q8NH19 301 aa11.12□□□□□ -0.63
MBD4-201ENST00000249910 MTURNQ8N3F0 131 aa11.12□□□□□ -0.63
MBD4-201ENST00000249910 OR10J6PQ8NGY7 276 aa11.12□□□□□ -0.63
MBD4-201ENST00000249910 ZNF580Q9UK33 172 aa11.12□□□□□ -0.63
MBD4-201ENST00000249910 IGHV4OR15-8A0A075B7B6 117 aa11.11□□□□□ -0.63
MBD4-201ENST00000249910 A0A087WW49 117 aa11.11□□□□□ -0.63
MBD4-201ENST00000249910 GATD1Q8NB37 220 aa11.11□□□□□ -0.63
MBD4-201ENST00000249910 PRSS3P2Q8NHM4 247 aa11.11□□□□□ -0.63
MBD4-201ENST00000249910 GTSF1LQ9H1H1 148 aa11.11□□□□□ -0.63
MBD4-201ENST00000249910 LEPROTL1O95214 131 aa11.11□□□□□ -0.63
MBD4-201ENST00000249910 EVI2AP22794 236 aa11.11□□□□□ -0.63
MBD4-201ENST00000249910 ZFAND2AQ8N6M9 145 aa11.11□□□□□ -0.63
MBD4-201ENST00000249910 PRELID3AQ96N28 172 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms