RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 SPTAN1Q13813 2472 aaKnown RBP12.38□□□□□ -0.43
SIN3B-201ENST00000248054 IGFL4Q6B9Z1 124 aa12.38□□□□□ -0.43
SIN3B-201ENST00000248054 INSP01308 110 aa12.38□□□□□ -0.43
SIN3B-201ENST00000248054 LTAP01374 205 aa12.38□□□□□ -0.43
SIN3B-201ENST00000248054 NSUN5P1Q3KNT7 163 aa12.38□□□□□ -0.43
SIN3B-201ENST00000248054 SCRT2Q9NQ03 307 aa12.38□□□□□ -0.43
SIN3B-201ENST00000248054 IGHV7-4-1A0A0J9YVY3 117 aa12.37□□□□□ -0.43
SIN3B-201ENST00000248054 RBAKDNA6NC62 111 aa12.37□□□□□ -0.43
SIN3B-201ENST00000248054 CRPP02741 224 aa12.37□□□□□ -0.43
SIN3B-201ENST00000248054 TIMM21Q9BVV7 248 aa12.37□□□□□ -0.43
SIN3B-201ENST00000248054 LENEPQ9Y5L5 61 aa12.37□□□□□ -0.43
SIN3B-201ENST00000248054 F8W1H4 67 aa12.37□□□□□ -0.43
SIN3B-201ENST00000248054 LGALS1P09382 135 aaKnown RBP12.37□□□□□ -0.43
SIN3B-201ENST00000248054 ERCC8Q13216 396 aa12.37□□□□□ -0.43
SIN3B-201ENST00000248054 BRCA2P51587 3418 aa12.37□□□□□ -0.43
SIN3B-201ENST00000248054 TRAV12-3A0A0B4J271 114 aa12.36□□□□□ -0.43
SIN3B-201ENST00000248054 SMKR1H3BMG3 65 aa12.36□□□□□ -0.43
SIN3B-201ENST00000248054 Q8N9W7 124 aa12.36□□□□□ -0.43
SIN3B-201ENST00000248054 TEX22C9J3V5 150 aa12.36□□□□□ -0.43
SIN3B-201ENST00000248054 CHCHD5Q9BSY4 110 aa12.36□□□□□ -0.43
SIN3B-201ENST00000248054 K7EMI3 77 aa12.36□□□□□ -0.43
SIN3B-201ENST00000248054 C2orf82Q6UX34 121 aa12.36□□□□□ -0.43
SIN3B-201ENST00000248054 TMEM213A2RRL7 107 aa12.36□□□□□ -0.43
SIN3B-201ENST00000248054 MRPL51Q4U2R6 128 aaKnown RBP12.36□□□□□ -0.43
SIN3B-201ENST00000248054 C16orf54Q6UWD8 224 aa12.36□□□□□ -0.43
SIN3B-201ENST00000248054 DEFB112Q30KQ8 113 aa12.35□□□□□ -0.43
SIN3B-201ENST00000248054 C11orf44Q8N8P7 122 aa12.35□□□□□ -0.43
SIN3B-201ENST00000248054 DYSFO75923 2080 aa12.35□□□□□ -0.43
SIN3B-201ENST00000248054 K7ERJ3 54 aa12.35□□□□□ -0.43
SIN3B-201ENST00000248054 MAPK1IP1LQ8NDC0 245 aa12.35□□□□□ -0.43
SIN3B-201ENST00000248054 IGKV1-17P01599 117 aa12.35□□□□□ -0.43
SIN3B-201ENST00000248054 RITA1Q96K30 269 aa12.35□□□□□ -0.43
SIN3B-201ENST00000248054 VGLL1Q99990 258 aa12.35□□□□□ -0.43
SIN3B-201ENST00000248054 PLCE1Q9P212 2302 aa12.35□□□□□ -0.43
SIN3B-201ENST00000248054 ANKHD1Q8IWZ3 2542 aaKnown RBP12.34□□□□□ -0.43
SIN3B-201ENST00000248054 H3BMG7 143 aa12.34□□□□□ -0.43
SIN3B-201ENST00000248054 PROP1O75360 226 aa12.34□□□□□ -0.43
SIN3B-201ENST00000248054 GP9P14770 177 aa12.34□□□□□ -0.43
SIN3B-201ENST00000248054 ZFP36P26651 326 aaKnown RBP12.34□□□□□ -0.43
SIN3B-201ENST00000248054 C2orf66Q6UXQ4 117 aa12.34□□□□□ -0.43
SIN3B-201ENST00000248054 C22orf34Q6ZV56 151 aa12.34□□□□□ -0.43
SIN3B-201ENST00000248054 ODF3BA8MYP8 253 aa12.34□□□□□ -0.43
SIN3B-201ENST00000248054 LINC00158P58513 81 aa12.34□□□□□ -0.43
SIN3B-201ENST00000248054 IGKV3D-20A0A0C4DH25 116 aa12.34□□□□□ -0.43
SIN3B-201ENST00000248054 PMVKQ15126 192 aa12.34□□□□□ -0.43
SIN3B-201ENST00000248054 C5orf56Q8N8D9 126 aa12.34□□□□□ -0.43
SIN3B-201ENST00000248054 SVIPQ8NHG7 77 aa12.34□□□□□ -0.43
SIN3B-201ENST00000248054 KMT2EQ8IZD2 1858 aa12.34□□□□□ -0.43
SIN3B-201ENST00000248054 TMEM89A2RUT3 159 aa12.33□□□□□ -0.43
SIN3B-201ENST00000248054 C8orf49Q96NF6 230 aa12.33□□□□□ -0.43
SIN3B-201ENST00000248054 C20orf78Q9BR46 151 aa12.33□□□□□ -0.43
SIN3B-201ENST00000248054 LEPROTO15243 131 aa12.33□□□□□ -0.44
SIN3B-201ENST00000248054 SH2D6Q7Z4S9 175 aa12.33□□□□□ -0.44
SIN3B-201ENST00000248054 PRB4P10163 310 aaPredicted RBP12.33□□□□□ -0.44
SIN3B-201ENST00000248054 BRWD1-AS2P59051 145 aa12.33□□□□□ -0.44
SIN3B-201ENST00000248054 FOXE3Q13461 319 aa12.33□□□□□ -0.44
SIN3B-201ENST00000248054 ZNF295-AS1Q8N0V1 137 aa12.32□□□□□ -0.44
SIN3B-201ENST00000248054 AMTNQ6UX39 209 aa12.32□□□□□ -0.44
SIN3B-201ENST00000248054 IGHV3-64A0A075B6Q5 118 aa12.32□□□□□ -0.44
SIN3B-201ENST00000248054 PATE2Q6UY27 113 aa12.32□□□□□ -0.44
SIN3B-201ENST00000248054 SIGLEC8Q9NYZ4 499 aa12.32□□□□□ -0.44
SIN3B-201ENST00000248054 LINC00310P59036 64 aa12.32□□□□□ -0.44
SIN3B-201ENST00000248054 WI2-2373I1.2A0A1W2PRP0 233 aa12.31□□□□□ -0.44
SIN3B-201ENST00000248054 C2orf70A6NJV1 201 aa12.31□□□□□ -0.44
SIN3B-201ENST00000248054 IGHV4-59P01825 116 aa12.31□□□□□ -0.44
SIN3B-201ENST00000248054 IGHV4-38-2P0DP08 117 aa12.31□□□□□ -0.44
SIN3B-201ENST00000248054 DEFB131AP59861 70 aa12.31□□□□□ -0.44
SIN3B-201ENST00000248054 DNAJC30Q96LL9 226 aa12.31□□□□□ -0.44
SIN3B-201ENST00000248054 ATG2AQ2TAZ0 1938 aa12.31□□□□□ -0.44
SIN3B-201ENST00000248054 HLA-DRB4P13762 266 aa12.31□□□□□ -0.44
SIN3B-201ENST00000248054 HLA-DRB4X5D2U9 266 aa12.31□□□□□ -0.44
SIN3B-201ENST00000248054 BDP1A6H8Y1 2624 aa12.31□□□□□ -0.44
SIN3B-201ENST00000248054 CTSGP08311 255 aa12.31□□□□□ -0.44
SIN3B-201ENST00000248054 SPATA12Q7Z6I5 190 aa12.31□□□□□ -0.44
SIN3B-201ENST00000248054 B5MCH6 92 aa12.3□□□□□ -0.44
SIN3B-201ENST00000248054 I3L3M4 83 aa12.3□□□□□ -0.44
SIN3B-201ENST00000248054 FAM167A-AS1Q96KT0 104 aa12.3□□□□□ -0.44
SIN3B-201ENST00000248054 TP53TG1Q9Y2A0 90 aa12.3□□□□□ -0.44
SIN3B-201ENST00000248054 LMO4P61968 165 aa12.3□□□□□ -0.44
SIN3B-201ENST00000248054 TCTEX1D4Q5JR98 221 aa12.3□□□□□ -0.44
SIN3B-201ENST00000248054 C11orf71Q6IPW1 123 aa12.3□□□□□ -0.44
SIN3B-201ENST00000248054 F8VRH5 84 aa12.3□□□□□ -0.44
SIN3B-201ENST00000248054 SMIM2Q9BVW6 85 aa12.3□□□□□ -0.44
SIN3B-201ENST00000248054 TRGV1A0A0A0MS02 117 aa12.29□□□□□ -0.44
SIN3B-201ENST00000248054 LRRC75A-AS1Q8N1F1 130 aa12.29□□□□□ -0.44
SIN3B-201ENST00000248054 PTPRQQ9UMZ3 2332 aa12.29□□□□□ -0.44
SIN3B-201ENST00000248054 EXPH5Q8NEV8 1989 aa12.29□□□□□ -0.44
SIN3B-201ENST00000248054 PPDPFLQ8WWR9 84 aa12.29□□□□□ -0.44
SIN3B-201ENST00000248054 WFDC2Q14508 124 aa12.28□□□□□ -0.44
SIN3B-201ENST00000248054 C11orf68Q9H3H3 251 aaKnown RBP12.28□□□□□ -0.44
SIN3B-201ENST00000248054 Q8N976 141 aa12.28□□□□□ -0.44
SIN3B-201ENST00000248054 PHLDA1Q8WV24 401 aaPredicted RBP12.28□□□□□ -0.44
SIN3B-201ENST00000248054 EML5Q05BV3 1969 aa12.28□□□□□ -0.44
SIN3B-201ENST00000248054 PRB1P04280 392 aa12.28□□□□□ -0.44
SIN3B-201ENST00000248054 INAFM2P0DMQ5 153 aa12.28□□□□□ -0.44
SIN3B-201ENST00000248054 PCP2Q8IVA1 136 aa12.28□□□□□ -0.44
SIN3B-201ENST00000248054 IGKV1OR2-108A0A075B7D4 117 aa12.27□□□□□ -0.44
SIN3B-201ENST00000248054 IGHG2P01859 326 aa12.27□□□□□ -0.44
SIN3B-201ENST00000248054 ZNF747Q9BV97 191 aa12.27□□□□□ -0.44
SIN3B-201ENST00000248054 IGHV1OR15-1A0A075B7D0 117 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms