RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	TMEM250	H0YL14	139 aa		7.23	□□□□□ -1.25
PHGDH-222	ENST00000641587		M0R2N4	97 aa		7.23	□□□□□ -1.25
PHGDH-222	ENST00000641587	RTL8C	O15255	209 aa		7.23	□□□□□ -1.25
PHGDH-222	ENST00000641587	GIG44	P09565	113 aa	Predicted RBP	7.23	□□□□□ -1.25
PHGDH-222	ENST00000641587	SFTA3	P0C7M3	94 aa		7.23	□□□□□ -1.25
PHGDH-222	ENST00000641587	TCTA	P57738	103 aa		7.23	□□□□□ -1.25
PHGDH-222	ENST00000641587	DEFB1	P60022	68 aa		7.23	□□□□□ -1.25
PHGDH-222	ENST00000641587	HIST1H1A	Q02539	215 aa	Predicted RBP	7.23	□□□□□ -1.25
PHGDH-222	ENST00000641587	EBLN2	Q6P2I7	272 aa		7.23	□□□□□ -1.25
PHGDH-222	ENST00000641587	LINC00336	Q6ZUF6	198 aa		7.23	□□□□□ -1.25
PHGDH-222	ENST00000641587	EIF4E3	Q8N5X7	224 aa	Known RBP	7.23	□□□□□ -1.25
PHGDH-222	ENST00000641587	C11orf52	Q96A22	123 aa		7.23	□□□□□ -1.25
PHGDH-222	ENST00000641587	SGK494	Q96LW2	274 aa		7.23	□□□□□ -1.25
PHGDH-222	ENST00000641587	PRSS29P	A6NIE9	313 aa		7.22	□□□□□ -1.25
PHGDH-222	ENST00000641587	ZNF727	A8MUV8	499 aa		7.22	□□□□□ -1.25
PHGDH-222	ENST00000641587		F6UB75	175 aa		7.22	□□□□□ -1.25
PHGDH-222	ENST00000641587	ZNF705D	P0CH99	300 aa	Predicted RBP	7.22	□□□□□ -1.25
PHGDH-222	ENST00000641587	ZNF705B	P0CI00	300 aa	Predicted RBP	7.22	□□□□□ -1.25
PHGDH-222	ENST00000641587	RPL35	P42766	123 aa	Known RBP	7.22	□□□□□ -1.25
PHGDH-222	ENST00000641587	CMC4	P56277	68 aa	Predicted RBP	7.22	□□□□□ -1.25
PHGDH-222	ENST00000641587	ERCC8	Q13216	396 aa		7.22	□□□□□ -1.25
PHGDH-222	ENST00000641587	SOHLH1	Q5JUK2	328 aa		7.22	□□□□□ -1.25
PHGDH-222	ENST00000641587	TMEM78	Q5T7P6	136 aa		7.22	□□□□□ -1.25
PHGDH-222	ENST00000641587	ARL6IP6	Q8N6S5	226 aa		7.22	□□□□□ -1.25
PHGDH-222	ENST00000641587	OR8A1	Q8NGG7	326 aa		7.22	□□□□□ -1.25
PHGDH-222	ENST00000641587	SMIM7	Q9BQ49	75 aa		7.22	□□□□□ -1.25
PHGDH-222	ENST00000641587	DERL1	Q9BUN8	251 aa		7.22	□□□□□ -1.25
PHGDH-222	ENST00000641587	PARL	Q9H300	379 aa		7.22	□□□□□ -1.25
PHGDH-222	ENST00000641587	CELA1	Q9UNI1	258 aa		7.22	□□□□□ -1.25
PHGDH-222	ENST00000641587	LRP1B	Q9NZR2	4599 aa		7.21	□□□□□ -1.25
PHGDH-222	ENST00000641587	TRAV8-1	A0A0A6YYK1	113 aa		7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587	RBAKDN	A6NC62	111 aa		7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587	KNCN	A6PVL3	124 aa		7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587		F8W036	122 aa		7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587	NDUFS6	O75380	124 aa	Known RBP	7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587	IGKV3-20	P01619	116 aa		7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587	ACTL10	Q5JWF8	245 aa		7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587	FOXI2	Q6ZQN5	318 aa		7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587	PRNT	Q86SH4	94 aa		7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587		Q86TA4	180 aa		7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587	TMEM75	Q8N9X5	138 aa		7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587	OR4B1	Q8NGF8	309 aa		7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587		Q8TAT8	98 aa		7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587	FMC1	Q96HJ9	113 aa		7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587	LINC00479	Q96M42	142 aa		7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587	VGLL1	Q99990	258 aa		7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587	NDFIP1	Q9BT67	221 aa		7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587	PPP1R14D	Q9NXH3	145 aa		7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587		X6R8D5	127 aa		7.21	□□□□□ -1.26
PHGDH-222	ENST00000641587	TRAV10	A0A0B4J240	114 aa		7.2	□□□□□ -1.26
PHGDH-222	ENST00000641587		A0A0J9YX75	114 aa		7.2	□□□□□ -1.26
PHGDH-222	ENST00000641587	TMEM218	A2RU14	115 aa		7.2	□□□□□ -1.26
PHGDH-222	ENST00000641587	DUSP14	O95147	198 aa	Known RBP	7.2	□□□□□ -1.26
PHGDH-222	ENST00000641587	S100A9	P06702	114 aa	Known RBP	7.2	□□□□□ -1.26
PHGDH-222	ENST00000641587	GNG4	P50150	75 aa		7.2	□□□□□ -1.26
PHGDH-222	ENST00000641587	FLI1	Q01543	452 aa	Predicted RBP	7.2	□□□□□ -1.26
PHGDH-222	ENST00000641587	CENPW	Q5EE01	88 aa		7.2	□□□□□ -1.26
PHGDH-222	ENST00000641587	GDF5OS	Q5U4N7	250 aa		7.2	□□□□□ -1.26
PHGDH-222	ENST00000641587	TRPT1	Q86TN4	253 aa	Known RBP	7.2	□□□□□ -1.26
PHGDH-222	ENST00000641587	ZNF575	Q86XF7	245 aa		7.2	□□□□□ -1.26
PHGDH-222	ENST00000641587	STH	Q8IWL8	128 aa		7.2	□□□□□ -1.26
PHGDH-222	ENST00000641587	SAV1	Q9H4B6	383 aa	Predicted RBP	7.2	□□□□□ -1.26
PHGDH-222	ENST00000641587	PSG8	Q9UQ74	426 aa		7.2	□□□□□ -1.26
PHGDH-222	ENST00000641587	FBLL1	A6NHQ2	334 aa	Known RBP	7.19	□□□□□ -1.26
PHGDH-222	ENST00000641587	NPIPB6	E9PJ23	425 aa		7.19	□□□□□ -1.26
PHGDH-222	ENST00000641587	MGST1	P10620	155 aa	Known RBP	7.19	□□□□□ -1.26
PHGDH-222	ENST00000641587	ZNF138	P52744	262 aa		7.19	□□□□□ -1.26
PHGDH-222	ENST00000641587	TAS2R60	P59551	318 aa		7.19	□□□□□ -1.26
PHGDH-222	ENST00000641587	TMEM183B	Q1AE95	376 aa		7.19	□□□□□ -1.26
PHGDH-222	ENST00000641587	FAM74A3	Q4VXF1	159 aa		7.19	□□□□□ -1.26
PHGDH-222	ENST00000641587	BAGE2	Q86Y30	109 aa		7.19	□□□□□ -1.26
PHGDH-222	ENST00000641587	NHLRC2	Q8NBF2	726 aa		7.19	□□□□□ -1.26
PHGDH-222	ENST00000641587	NIPSNAP3B	Q9BS92	247 aa		7.19	□□□□□ -1.26
PHGDH-222	ENST00000641587	AGPAT4-IT1	Q9H0P7	198 aa		7.19	□□□□□ -1.26
PHGDH-222	ENST00000641587	KRBOX1	C9JBD0	128 aa		7.18	□□□□□ -1.26
PHGDH-222	ENST00000641587		J3KRW8	73 aa		7.18	□□□□□ -1.26
PHGDH-222	ENST00000641587	AMBP	P02760	352 aa		7.18	□□□□□ -1.26
PHGDH-222	ENST00000641587	HLA-DRB4	P13762	266 aa		7.18	□□□□□ -1.26
PHGDH-222	ENST00000641587	MIF	P14174	115 aa		7.18	□□□□□ -1.26
PHGDH-222	ENST00000641587	ADIRF	Q15847	76 aa		7.18	□□□□□ -1.26
PHGDH-222	ENST00000641587	TMEM241	Q24JQ0	296 aa		7.18	□□□□□ -1.26
PHGDH-222	ENST00000641587	C12orf74	Q32Q52	190 aa		7.18	□□□□□ -1.26
PHGDH-222	ENST00000641587	C9orf47	Q6ZRZ4	202 aa		7.18	□□□□□ -1.26
PHGDH-222	ENST00000641587	POM121L12	Q8N7R1	296 aa		7.18	□□□□□ -1.26
PHGDH-222	ENST00000641587	LINC00477	Q96M19	166 aa		7.18	□□□□□ -1.26
PHGDH-222	ENST00000641587	SEC11C	Q9BY50	192 aa		7.18	□□□□□ -1.26
PHGDH-222	ENST00000641587	NAT8	Q9UHE5	227 aa		7.18	□□□□□ -1.26
PHGDH-222	ENST00000641587	KLF12	Q9Y4X4	402 aa		7.18	□□□□□ -1.26
PHGDH-222	ENST00000641587	HLA-DRB4	X5D2U9	266 aa		7.18	□□□□□ -1.26
PHGDH-222	ENST00000641587	IGLV2-18	A0A075B6J9	118 aa		7.17	□□□□□ -1.26
PHGDH-222	ENST00000641587	DEFB131B	A0A096LNP1	70 aa		7.17	□□□□□ -1.26
PHGDH-222	ENST00000641587	PGPEP1L	A6NFU8	196 aa		7.17	□□□□□ -1.26
PHGDH-222	ENST00000641587		C9JCJ5	164 aa		7.17	□□□□□ -1.26
PHGDH-222	ENST00000641587		H3BMM0	161 aa		7.17	□□□□□ -1.26
PHGDH-222	ENST00000641587	ATP6V1G1	O75348	118 aa		7.17	□□□□□ -1.26
PHGDH-222	ENST00000641587	LTA	P01374	205 aa		7.17	□□□□□ -1.26
PHGDH-222	ENST00000641587	IGLV2-11	P01706	119 aa		7.17	□□□□□ -1.26
PHGDH-222	ENST00000641587	CT45A10	P0DMU9	189 aa		7.17	□□□□□ -1.26
PHGDH-222	ENST00000641587	ADCYAP1	P18509	176 aa		7.17	□□□□□ -1.26
PHGDH-222	ENST00000641587	LEP	P41159	167 aa		7.17	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms