RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	CRIP1	P50238	77 aa		13.04	□□□□□ -0.32
SPIN3-238	ENST00000640421	COX8C	Q7Z4L0	72 aa		13.04	□□□□□ -0.32
SPIN3-238	ENST00000640421	ODF3	Q96PU9	254 aa		13.04	□□□□□ -0.32
SPIN3-238	ENST00000640421	SMIM12	Q96EX1	92 aa		13.04	□□□□□ -0.32
SPIN3-238	ENST00000640421	CLUHP3	Q96NS8	147 aa		13.04	□□□□□ -0.32
SPIN3-238	ENST00000640421	NDFIP1	Q9BT67	221 aa		13.04	□□□□□ -0.32
SPIN3-238	ENST00000640421	SRD5A3	Q9H8P0	318 aa		13.04	□□□□□ -0.32
SPIN3-238	ENST00000640421	TRAV12-2	A0A075B6T6	113 aa		13.03	□□□□□ -0.32
SPIN3-238	ENST00000640421	KLLN	B2CW77	178 aa		13.03	□□□□□ -0.32
SPIN3-238	ENST00000640421	RPL35A	P18077	110 aa	Known RBP	13.03	□□□□□ -0.32
SPIN3-238	ENST00000640421	PRR27	Q6MZM9	219 aa		13.03	□□□□□ -0.32
SPIN3-238	ENST00000640421	TRBV7-9	A0A0J9YWB2	115 aa		13.02	□□□□□ -0.32
SPIN3-238	ENST00000640421	GCG	P01275	180 aa		13.02	□□□□□ -0.32
SPIN3-238	ENST00000640421	PRB2	P02812	416 aa	Predicted RBP	13.02	□□□□□ -0.32
SPIN3-238	ENST00000640421	BTN1A1	Q13410	526 aa		13.02	□□□□□ -0.32
SPIN3-238	ENST00000640421	KPRP	Q5T749	579 aa	Predicted RBP	13.02	□□□□□ -0.32
SPIN3-238	ENST00000640421	CRX	O43186	299 aa	Predicted RBP	13.02	□□□□□ -0.33
SPIN3-238	ENST00000640421	SMUG1	Q53HV7	270 aa		13.02	□□□□□ -0.33
SPIN3-238	ENST00000640421	ISOC2	Q96AB3	205 aa		13.02	□□□□□ -0.33
SPIN3-238	ENST00000640421	GPX1	P07203	203 aa		13.01	□□□□□ -0.33
SPIN3-238	ENST00000640421	GIG44	P09565	113 aa	Predicted RBP	13.01	□□□□□ -0.33
SPIN3-238	ENST00000640421	CDKN1B	P46527	198 aa		13.01	□□□□□ -0.33
SPIN3-238	ENST00000640421	GFI1B	Q5VTD9	330 aa		13.01	□□□□□ -0.33
SPIN3-238	ENST00000640421	RNASE7	Q9H1E1	156 aa	Known RBP	13.01	□□□□□ -0.33
SPIN3-238	ENST00000640421	ZMAT5	Q9UDW3	170 aa	Known RBP	13.01	□□□□□ -0.33
SPIN3-238	ENST00000640421	IGHV4-30-4	P0DP06	118 aa		13	□□□□□ -0.33
SPIN3-238	ENST00000640421	RNASE4	P34096	147 aa	Known RBP	13	□□□□□ -0.33
SPIN3-238	ENST00000640421	LEP	P41159	167 aa		13	□□□□□ -0.33
SPIN3-238	ENST00000640421	PNRC1	Q12796	327 aa	Predicted RBP	13	□□□□□ -0.33
SPIN3-238	ENST00000640421	C19orf71	A6NCJ1	209 aa		12.99	□□□□□ -0.33
SPIN3-238	ENST00000640421		M0R036	132 aa		12.99	□□□□□ -0.33
SPIN3-238	ENST00000640421	RBMY1A1	P0DJD3	496 aa	Known RBP	12.99	□□□□□ -0.33
SPIN3-238	ENST00000640421	RBMY1C	P0DJD4	496 aa		12.99	□□□□□ -0.33
SPIN3-238	ENST00000640421	RBMY1F	Q15415	496 aa	Known RBP	12.99	□□□□□ -0.33
SPIN3-238	ENST00000640421	SH2D1A	O60880	128 aa		12.99	□□□□□ -0.33
SPIN3-238	ENST00000640421	ATRAID	Q6UW56	229 aa		12.99	□□□□□ -0.33
SPIN3-238	ENST00000640421	CLRN3	Q8NCR9	226 aa		12.99	□□□□□ -0.33
SPIN3-238	ENST00000640421	C11orf21	Q9P2W6	132 aa		12.99	□□□□□ -0.33
SPIN3-238	ENST00000640421	XCL2	Q9UBD3	114 aa		12.99	□□□□□ -0.33
SPIN3-238	ENST00000640421	TSPO	P30536	169 aa		12.98	□□□□□ -0.33
SPIN3-238	ENST00000640421	SVBP	Q8N300	66 aa		12.98	□□□□□ -0.33
SPIN3-238	ENST00000640421	TRAV12-3	A0A0B4J271	114 aa		12.97	□□□□□ -0.33
SPIN3-238	ENST00000640421	C7orf71	A4D174	169 aa		12.97	□□□□□ -0.33
SPIN3-238	ENST00000640421	PFN1	P07737	140 aa	Known RBP	12.97	□□□□□ -0.33
SPIN3-238	ENST00000640421	FAM162B	Q5T6X4	162 aa		12.97	□□□□□ -0.33
SPIN3-238	ENST00000640421		Q6AWC8	147 aa		12.97	□□□□□ -0.33
SPIN3-238	ENST00000640421	NUDT10	Q8NFP7	164 aa		12.97	□□□□□ -0.33
SPIN3-238	ENST00000640421	NUDT11	Q96G61	164 aa		12.97	□□□□□ -0.33
SPIN3-238	ENST00000640421	SFRP2	Q96HF1	295 aa		12.97	□□□□□ -0.33
SPIN3-238	ENST00000640421	ZNF324	O75467	553 aa	Predicted RBP	12.97	□□□□□ -0.33
SPIN3-238	ENST00000640421	RNF212	Q495C1	297 aa		12.97	□□□□□ -0.33
SPIN3-238	ENST00000640421	MEGF8	Q7Z7M0	2845 aa		12.96	□□□□□ -0.33
SPIN3-238	ENST00000640421	ERVFC1-1	P60608	527 aa		12.96	□□□□□ -0.33
SPIN3-238	ENST00000640421	IBA57	Q5T440	356 aa	Known RBP	12.96	□□□□□ -0.33
SPIN3-238	ENST00000640421	ZNF575	Q86XF7	245 aa		12.96	□□□□□ -0.33
SPIN3-238	ENST00000640421	TUBA4B	Q9H853	241 aa		12.96	□□□□□ -0.33
SPIN3-238	ENST00000640421	C7orf77	A4D0Y5	90 aa		12.95	□□□□□ -0.34
SPIN3-238	ENST00000640421	FABP5P3	A8MUU1	101 aa		12.95	□□□□□ -0.34
SPIN3-238	ENST00000640421	NUTF2	P61970	127 aa	Known RBP	12.95	□□□□□ -0.34
SPIN3-238	ENST00000640421	RPL19	P84098	196 aa	Known RBP	12.95	□□□□□ -0.34
SPIN3-238	ENST00000640421	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	12.95	□□□□□ -0.34
SPIN3-238	ENST00000640421	CA1	P00915	261 aa	Predicted RBP	12.95	□□□□□ -0.34
SPIN3-238	ENST00000640421	FAM231D	Q6ZW35	169 aa		12.95	□□□□□ -0.34
SPIN3-238	ENST00000640421	TRAV21	A0A0B4J279	112 aa		12.94	□□□□□ -0.34
SPIN3-238	ENST00000640421	SNAPIN	O95295	136 aa		12.94	□□□□□ -0.34
SPIN3-238	ENST00000640421	MORN3	Q6PF18	240 aa	Predicted RBP	12.94	□□□□□ -0.34
SPIN3-238	ENST00000640421	CSTL1	Q9H114	145 aa		12.94	□□□□□ -0.34
SPIN3-238	ENST00000640421	BIN3	Q9NQY0	253 aa		12.94	□□□□□ -0.34
SPIN3-238	ENST00000640421	OSTC	Q9NRP0	149 aa		12.94	□□□□□ -0.34
SPIN3-238	ENST00000640421		V9GYV3	84 aa		12.94	□□□□□ -0.34
SPIN3-238	ENST00000640421	IGKV3D-20	A0A0C4DH25	116 aa		12.93	□□□□□ -0.34
SPIN3-238	ENST00000640421		K7EIL1	84 aa		12.93	□□□□□ -0.34
SPIN3-238	ENST00000640421	MUC21	Q5SSG8	566 aa		12.93	□□□□□ -0.34
SPIN3-238	ENST00000640421	C1orf158	Q8N1D5	194 aa		12.93	□□□□□ -0.34
SPIN3-238	ENST00000640421	CSNK1G2-AS1	Q8NCQ2	148 aa		12.93	□□□□□ -0.34
SPIN3-238	ENST00000640421		A8MZ25	164 aa		12.93	□□□□□ -0.34
SPIN3-238	ENST00000640421		B4DEV8	164 aa		12.93	□□□□□ -0.34
SPIN3-238	ENST00000640421		P01737	135 aa		12.93	□□□□□ -0.34
SPIN3-238	ENST00000640421	OR10G8	Q8NGN5	311 aa		12.93	□□□□□ -0.34
SPIN3-238	ENST00000640421	DAZAP1	Q96EP5	407 aa	Known RBP	12.93	□□□□□ -0.34
SPIN3-238	ENST00000640421	TMSB15B	A0A087X1C1	80 aa		12.92	□□□□□ -0.34
SPIN3-238	ENST00000640421	INS	P01308	110 aa		12.92	□□□□□ -0.34
SPIN3-238	ENST00000640421	PRM2	P04554	102 aa		12.92	□□□□□ -0.34
SPIN3-238	ENST00000640421	RHEB	Q15382	184 aa		12.92	□□□□□ -0.34
SPIN3-238	ENST00000640421	RPS10P5	Q9NQ39	176 aa		12.92	□□□□□ -0.34
SPIN3-238	ENST00000640421	NAGK	Q9UJ70	344 aa		12.92	□□□□□ -0.34
SPIN3-238	ENST00000640421	PRKDC	P78527	4128 aa	Known RBP	12.91	□□□□□ -0.34
SPIN3-238	ENST00000640421	ZNF705G	A8MUZ8	300 aa	Predicted RBP	12.91	□□□□□ -0.34
SPIN3-238	ENST00000640421	AMBP	P02760	352 aa		12.91	□□□□□ -0.34
SPIN3-238	ENST00000640421	ORM1	P02763	201 aa		12.91	□□□□□ -0.34
SPIN3-238	ENST00000640421	ANXA2R	Q3ZCQ2	193 aa		12.91	□□□□□ -0.34
SPIN3-238	ENST00000640421	RPP21	Q9H633	154 aa	Known RBP	12.91	□□□□□ -0.34
SPIN3-238	ENST00000640421	KIR2DL5B	A0A0G2JN68	375 aa		12.91	□□□□□ -0.34
SPIN3-238	ENST00000640421	KIR2DL5B	A0A0G2JPC4	375 aa		12.91	□□□□□ -0.34
SPIN3-238	ENST00000640421	GATC	O43716	136 aa	Known RBP	12.91	□□□□□ -0.34
SPIN3-238	ENST00000640421	MT-ND4L	P03901	98 aa		12.91	□□□□□ -0.34
SPIN3-238	ENST00000640421	FRMD6-AS1	P0C7T7	363 aa		12.91	□□□□□ -0.34
SPIN3-238	ENST00000640421	GZMB	P10144	247 aa		12.91	□□□□□ -0.34
SPIN3-238	ENST00000640421	LINC01559	Q495D7	138 aa		12.91	□□□□□ -0.34
SPIN3-238	ENST00000640421	KIR2DL5A	Q8N109	375 aa		12.91	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms