RNA–Protein interactions for RNA: ENST00000639658.1

POLR2B-213, Transcript of RNA polymerase II subunit B, humanhuman

TSL 5 BASIC

Gene POLR2B, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-213ENST00000639658 PRNTQ86SH4 94 aa4.34□□□□□ -1.71
POLR2B-213ENST00000639658 SCNM1Q9BWG6 230 aa4.34□□□□□ -1.71
POLR2B-213ENST00000639658 RNF186Q9NXI6 227 aa4.34□□□□□ -1.71
POLR2B-213ENST00000639658 PEMTQ9UBM1 199 aa4.34□□□□□ -1.71
POLR2B-213ENST00000639658 USF3Q68DE3 2245 aa4.34□□□□□ -1.71
POLR2B-213ENST00000639658 DNAH12Q6ZR08 3092 aa4.34□□□□□ -1.71
POLR2B-213ENST00000639658 TRGV11A0A075B6L2 103 aa4.34□□□□□ -1.71
POLR2B-213ENST00000639658 TRAV8-1A0A0A6YYK1 113 aa4.34□□□□□ -1.71
POLR2B-213ENST00000639658 FAM236AA0A1B0GUQ0 79 aa4.34□□□□□ -1.71
POLR2B-213ENST00000639658 FAM236BA0A1B0GV22 79 aa4.34□□□□□ -1.71
POLR2B-213ENST00000639658 CXCL13O43927 109 aa4.34□□□□□ -1.71
POLR2B-213ENST00000639658 COX6A1P12074 109 aa4.34□□□□□ -1.71
POLR2B-213ENST00000639658 NTN5Q8WTR8 489 aaPredicted RBP4.34□□□□□ -1.71
POLR2B-213ENST00000639658 METTL26Q96S19 204 aa4.34□□□□□ -1.71
POLR2B-213ENST00000639658 J3QQQ9 107 aa4.34□□□□□ -1.72
POLR2B-213ENST00000639658 NDUFC2O95298 119 aa4.34□□□□□ -1.72
POLR2B-213ENST00000639658 NXPH1P58417 271 aa4.34□□□□□ -1.72
POLR2B-213ENST00000639658 CCL8P80075 99 aa4.34□□□□□ -1.72
POLR2B-213ENST00000639658 MRPS36P82909 103 aaKnown RBP4.34□□□□□ -1.72
POLR2B-213ENST00000639658 Q6ZT83 130 aa4.34□□□□□ -1.72
POLR2B-213ENST00000639658 UBALD1Q8TB05 177 aa4.34□□□□□ -1.72
POLR2B-213ENST00000639658 DCANP1Q8TF63 244 aa4.34□□□□□ -1.72
POLR2B-213ENST00000639658 FSCN3Q9NQT6 498 aa4.34□□□□□ -1.72
POLR2B-213ENST00000639658 RP1P56715 2156 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 LOC107984156A0A0G2JMH3 177 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 PRDX2P32119 198 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 MLANAQ16655 118 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 HRCT1Q6UXD1 115 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 ARL17AQ8IVW1 177 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 DAND5Q8N907 189 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 MRPL36Q9P0J6 103 aaKnown RBP4.33□□□□□ -1.72
POLR2B-213ENST00000639658 AGRNO00468 2067 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 IGLV4-69A0A075B6H9 119 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 IGKV1D-17A0A075B6S4 117 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 TMEM223A0PJW6 202 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 ZNF815PA8K554 130 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 MED14OSP0DP75 135 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 LINC00477Q96M19 166 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 SLC50A1Q9BRV3 221 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 GNG12Q9UBI6 72 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 IGHV3-43A0A0B4J1X8 118 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 H7C423 109 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 LST1O00453 97 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 IGHV3-43DP0DP04 118 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 CRIP2P52943 208 aaPredicted RBP4.33□□□□□ -1.72
POLR2B-213ENST00000639658 IL11RAQ14626 422 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 KLK9Q2XQG4 91 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 FAM222AQ5U5X8 452 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 GUSBP11Q6P575 273 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 ABCA7Q8IZY2 2146 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 FAM216BQ8N7L0 139 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 FAM19A4Q96LR4 140 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 RPUSD1Q9UJJ7 312 aaKnown RBP4.33□□□□□ -1.72
POLR2B-213ENST00000639658 KLK9Q9UKQ9 250 aa4.33□□□□□ -1.72
POLR2B-213ENST00000639658 TRAV12-2A0A075B6T6 113 aa4.32□□□□□ -1.72
POLR2B-213ENST00000639658 TRAV13-1A0A0B4J241 112 aa4.32□□□□□ -1.72
POLR2B-213ENST00000639658 RNF223E7ERA6 249 aa4.32□□□□□ -1.72
POLR2B-213ENST00000639658 BCE1O60756 84 aa4.32□□□□□ -1.72
POLR2B-213ENST00000639658 PPP1R17O96001 155 aa4.32□□□□□ -1.72
POLR2B-213ENST00000639658 EGR2P11161 476 aaPredicted RBP4.32□□□□□ -1.72
POLR2B-213ENST00000639658 HERVK_113P61574 105 aa4.32□□□□□ -1.72
POLR2B-213ENST00000639658 TMEM141Q96I45 108 aa4.32□□□□□ -1.72
POLR2B-213ENST00000639658 SMIM2Q9BVW6 85 aa4.32□□□□□ -1.72
POLR2B-213ENST00000639658 SRSF9Q13242 221 aaKnown RBP eCLIP4.32□□□□□ -1.72
POLR2B-213ENST00000639658 SERP2Q8N6R1 65 aa4.32□□□□□ -1.72
POLR2B-213ENST00000639658 TIMM17AQ99595 171 aa4.32□□□□□ -1.72
POLR2B-213ENST00000639658 C16orf95Q9H693 158 aa4.32□□□□□ -1.72
POLR2B-213ENST00000639658 SERP1Q9Y6X1 66 aa4.32□□□□□ -1.72
POLR2B-213ENST00000639658 TEX49A0A1B0GTD5 131 aa4.31□□□□□ -1.72
POLR2B-213ENST00000639658 PFN2P35080 140 aa4.31□□□□□ -1.72
POLR2B-213ENST00000639658 C3orf36Q3SXR2 165 aa4.31□□□□□ -1.72
POLR2B-213ENST00000639658 TMEM200BQ69YZ2 307 aa4.31□□□□□ -1.72
POLR2B-213ENST00000639658 ZNF491Q8N8L2 437 aa4.31□□□□□ -1.72
POLR2B-213ENST00000639658 MRPL53Q96EL3 112 aaKnown RBP4.31□□□□□ -1.72
POLR2B-213ENST00000639658 DPH3P1Q9H4G8 78 aa4.31□□□□□ -1.72
POLR2B-213ENST00000639658 I3L2K1 104 aa4.31□□□□□ -1.72
POLR2B-213ENST00000639658 IGKV3-15P01624 115 aa4.31□□□□□ -1.72
POLR2B-213ENST00000639658 MNX1P50219 401 aaPredicted RBP4.31□□□□□ -1.72
POLR2B-213ENST00000639658 MDP1Q86V88 176 aa4.31□□□□□ -1.72
POLR2B-213ENST00000639658 LINC00527Q9UJ94 153 aa4.31□□□□□ -1.72
POLR2B-213ENST00000639658 DEFB108AA8MXU0 73 aa4.31□□□□□ -1.72
POLR2B-213ENST00000639658 IGKV1-16P04430 117 aa4.31□□□□□ -1.72
POLR2B-213ENST00000639658 DCTN5Q9BTE1 182 aa4.31□□□□□ -1.72
POLR2B-213ENST00000639658 A0A0J9YXY3 114 aa4.3□□□□□ -1.72
POLR2B-213ENST00000639658 E7EUB6 86 aa4.3□□□□□ -1.72
POLR2B-213ENST00000639658 SMKR1H3BMG3 65 aa4.3□□□□□ -1.72
POLR2B-213ENST00000639658 LEPROTO15243 131 aa4.3□□□□□ -1.72
POLR2B-213ENST00000639658 BUB3O43684 328 aa4.3□□□□□ -1.72
POLR2B-213ENST00000639658 TIMM17BO60830 172 aa4.3□□□□□ -1.72
POLR2B-213ENST00000639658 IGHG2P01859 326 aa4.3□□□□□ -1.72
POLR2B-213ENST00000639658 RPL35AP18077 110 aaKnown RBP4.3□□□□□ -1.72
POLR2B-213ENST00000639658 ZNF56Q15929 161 aa4.3□□□□□ -1.72
POLR2B-213ENST00000639658 C1orf195Q5TG92 126 aa4.3□□□□□ -1.72
POLR2B-213ENST00000639658 EXOC3-AS1Q8N2X6 119 aa4.3□□□□□ -1.72
POLR2B-213ENST00000639658 C8orf49Q96NF6 230 aa4.3□□□□□ -1.72
POLR2B-213ENST00000639658 IGHV7-4-1A0A0J9YVY3 117 aa4.3□□□□□ -1.72
POLR2B-213ENST00000639658 IGIPA6NJ69 53 aa4.3□□□□□ -1.72
POLR2B-213ENST00000639658 CDX4O14627 284 aaPredicted RBP4.3□□□□□ -1.72
POLR2B-213ENST00000639658 NDUFA3O95167 84 aa4.3□□□□□ -1.72
POLR2B-213ENST00000639658 IGLV1-44P01699 117 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms