RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 C8orf31Q8N9H6 132 aa11.33□□□□□ -0.6
SCARB2-208ENST00000638372 ZNF479Q96JC4 524 aa11.33□□□□□ -0.6
SCARB2-208ENST00000638372 IGKV1-17P01599 117 aa11.33□□□□□ -0.6
SCARB2-208ENST00000638372 ADORA2A-AS1P86434 159 aa11.33□□□□□ -0.6
SCARB2-208ENST00000638372 SMIM27A0A1W2PRY6 76 aa11.33□□□□□ -0.6
SCARB2-208ENST00000638372 PRB1P04280 392 aa11.33□□□□□ -0.6
SCARB2-208ENST00000638372 HOXB4P17483 251 aaPredicted RBP11.33□□□□□ -0.6
SCARB2-208ENST00000638372 Q8NA96 180 aa11.33□□□□□ -0.6
SCARB2-208ENST00000638372 TRAV26-2A0A0B4J265 109 aa11.32□□□□□ -0.6
SCARB2-208ENST00000638372 PRSS46E5RG02 174 aa11.32□□□□□ -0.6
SCARB2-208ENST00000638372 NDUFA4O00483 81 aa11.32□□□□□ -0.6
SCARB2-208ENST00000638372 HOXA3O43365 443 aaPredicted RBP11.32□□□□□ -0.6
SCARB2-208ENST00000638372 NPC2P61916 151 aa11.32□□□□□ -0.6
SCARB2-208ENST00000638372 MRPL51Q4U2R6 128 aaKnown RBP11.32□□□□□ -0.6
SCARB2-208ENST00000638372 OR11H6Q8NGC7 330 aa11.32□□□□□ -0.6
SCARB2-208ENST00000638372 CFAP161Q6P656 301 aa11.32□□□□□ -0.6
SCARB2-208ENST00000638372 NCKAP5O14513 1909 aa11.32□□□□□ -0.6
SCARB2-208ENST00000638372 E7EUB6 86 aa11.32□□□□□ -0.6
SCARB2-208ENST00000638372 EREGO14944 169 aa11.32□□□□□ -0.6
SCARB2-208ENST00000638372 INSP01308 110 aa11.32□□□□□ -0.6
SCARB2-208ENST00000638372 MRPS16Q9Y3D3 137 aaKnown RBP11.32□□□□□ -0.6
SCARB2-208ENST00000638372 F6UB75 175 aa11.31□□□□□ -0.6
SCARB2-208ENST00000638372 IGHV4-59P01825 116 aa11.31□□□□□ -0.6
SCARB2-208ENST00000638372 TDGF1P3P51864 188 aa11.31□□□□□ -0.6
SCARB2-208ENST00000638372 ANXA2RQ3ZCQ2 193 aa11.31□□□□□ -0.6
SCARB2-208ENST00000638372 LINC01559Q495D7 138 aa11.31□□□□□ -0.6
SCARB2-208ENST00000638372 Q71RC1 249 aaPredicted RBP11.31□□□□□ -0.6
SCARB2-208ENST00000638372 DEFB130BP0DP73 79 aa11.31□□□□□ -0.6
SCARB2-208ENST00000638372 DEFB130AP0DP74 79 aa11.31□□□□□ -0.6
SCARB2-208ENST00000638372 TMEM95Q3KNT9 176 aa11.31□□□□□ -0.6
SCARB2-208ENST00000638372 C22orf34Q6ZV56 151 aa11.31□□□□□ -0.6
SCARB2-208ENST00000638372 NRGNQ92686 78 aa11.31□□□□□ -0.6
SCARB2-208ENST00000638372 A0A087WX48 190 aa11.31□□□□□ -0.6
SCARB2-208ENST00000638372 CRIP3Q6Q6R5 217 aa11.31□□□□□ -0.6
SCARB2-208ENST00000638372 IGKV1OR2-108A0A075B7D4 117 aa11.3□□□□□ -0.6
SCARB2-208ENST00000638372 CENPVL3A0A0U1RRI6 287 aa11.3□□□□□ -0.6
SCARB2-208ENST00000638372 LINC01549A6NIU2 74 aa11.3□□□□□ -0.6
SCARB2-208ENST00000638372 MALP21145 153 aa11.3□□□□□ -0.6
SCARB2-208ENST00000638372 PATE2Q6UY27 113 aa11.3□□□□□ -0.6
SCARB2-208ENST00000638372 K7EIM0 57 aa11.3□□□□□ -0.6
SCARB2-208ENST00000638372 SCGB1A1P11684 91 aa11.3□□□□□ -0.6
SCARB2-208ENST00000638372 PROP1O75360 226 aa11.3□□□□□ -0.6
SCARB2-208ENST00000638372 IGHV4-39P01824 125 aa11.3□□□□□ -0.6
SCARB2-208ENST00000638372 TEX43Q6ZNM6 134 aa11.3□□□□□ -0.6
SCARB2-208ENST00000638372 IGHV7-81A0A0B4J1V7 117 aa11.3□□□□□ -0.6
SCARB2-208ENST00000638372 BLCAPP62952 87 aa11.3□□□□□ -0.6
SCARB2-208ENST00000638372 DEFB112Q30KQ8 113 aa11.3□□□□□ -0.6
SCARB2-208ENST00000638372 SAMD5Q5TGI4 173 aa11.3□□□□□ -0.6
SCARB2-208ENST00000638372 IGHV4-30-2A0A087WSY4 118 aa11.29□□□□□ -0.6
SCARB2-208ENST00000638372 TRAV13-1A0A0B4J241 112 aa11.29□□□□□ -0.6
SCARB2-208ENST00000638372 IGHV3-16A0A0C4DH30 117 aa11.29□□□□□ -0.6
SCARB2-208ENST00000638372 KMT2EQ8IZD2 1858 aa11.29□□□□□ -0.6
SCARB2-208ENST00000638372 PLA2G5P39877 138 aa11.29□□□□□ -0.6
SCARB2-208ENST00000638372 UTF1Q5T230 341 aa11.29□□□□□ -0.6
SCARB2-208ENST00000638372 DYNAPQ8N1N2 210 aa11.29□□□□□ -0.6
SCARB2-208ENST00000638372 IGHV4-38-2P0DP08 117 aa11.29□□□□□ -0.6
SCARB2-208ENST00000638372 C2orf66Q6UXQ4 117 aa11.29□□□□□ -0.6
SCARB2-208ENST00000638372 NEGR1Q7Z3B1 354 aa11.29□□□□□ -0.6
SCARB2-208ENST00000638372 SPRY2O43597 315 aa11.28□□□□□ -0.6
SCARB2-208ENST00000638372 C11orf68Q9H3H3 251 aaKnown RBP11.28□□□□□ -0.6
SCARB2-208ENST00000638372 MRPL36Q9P0J6 103 aaKnown RBP11.28□□□□□ -0.6
SCARB2-208ENST00000638372 NPYP01303 97 aa11.28□□□□□ -0.6
SCARB2-208ENST00000638372 ODF3L1Q8IXM7 274 aa11.28□□□□□ -0.6
SCARB2-208ENST00000638372 PRADC1Q9BSG0 188 aa11.28□□□□□ -0.6
SCARB2-208ENST00000638372 SPXQ9BT56 116 aa11.28□□□□□ -0.6
SCARB2-208ENST00000638372 AGPAT4-IT1Q9H0P7 198 aa11.28□□□□□ -0.6
SCARB2-208ENST00000638372 TANC2Q9HCD6 1990 aa11.28□□□□□ -0.6
SCARB2-208ENST00000638372 IGLV1-47P01700 117 aa11.28□□□□□ -0.6
SCARB2-208ENST00000638372 CMC4P56277 68 aaPredicted RBP11.28□□□□□ -0.6
SCARB2-208ENST00000638372 DSCAMO60469 2012 aa11.28□□□□□ -0.6
SCARB2-208ENST00000638372 IGHV1-24A0A0C4DH33 117 aa11.27□□□□□ -0.6
SCARB2-208ENST00000638372 LINC01619G3V211 115 aa11.27□□□□□ -0.6
SCARB2-208ENST00000638372 I3L2K1 104 aa11.27□□□□□ -0.6
SCARB2-208ENST00000638372 DLEU1O43261 78 aa11.27□□□□□ -0.61
SCARB2-208ENST00000638372 DTX2Q86UW9 622 aa11.27□□□□□ -0.61
SCARB2-208ENST00000638372 C20orf144Q9BQM9 153 aa11.27□□□□□ -0.61
SCARB2-208ENST00000638372 SIGLEC8Q9NYZ4 499 aa11.27□□□□□ -0.61
SCARB2-208ENST00000638372 TP53TG1Q9Y2A0 90 aa11.27□□□□□ -0.61
SCARB2-208ENST00000638372 ARHGAP32A7KAX9 2087 aa11.27□□□□□ -0.61
SCARB2-208ENST00000638372 LTAP01374 205 aa11.27□□□□□ -0.61
SCARB2-208ENST00000638372 OR5A1Q8NGJ0 315 aa11.27□□□□□ -0.61
SCARB2-208ENST00000638372 PAX2Q02962 417 aa11.26□□□□□ -0.61
SCARB2-208ENST00000638372 CDKN1BP46527 198 aa11.26□□□□□ -0.61
SCARB2-208ENST00000638372 LINC00158P58513 81 aa11.26□□□□□ -0.61
SCARB2-208ENST00000638372 CFHR3Q02985 330 aa11.26□□□□□ -0.61
SCARB2-208ENST00000638372 C1QTNF4Q9BXJ3 329 aa11.26□□□□□ -0.61
SCARB2-208ENST00000638372 FN1P02751 2386 aaKnown RBP11.26□□□□□ -0.61
SCARB2-208ENST00000638372 LRRK2Q5S007 2527 aa11.26□□□□□ -0.61
SCARB2-208ENST00000638372 IGHV7-4-1A0A0J9YVY3 117 aa11.26□□□□□ -0.61
SCARB2-208ENST00000638372 SDHAF1A6NFY7 115 aa11.26□□□□□ -0.61
SCARB2-208ENST00000638372 EGR2P11161 476 aaPredicted RBP11.26□□□□□ -0.61
SCARB2-208ENST00000638372 TTC32Q5I0X7 151 aa11.26□□□□□ -0.61
SCARB2-208ENST00000638372 SNHG12Q9BXW3 62 aa11.26□□□□□ -0.61
SCARB2-208ENST00000638372 IGHV1OR15-1A0A075B7D0 117 aa11.25□□□□□ -0.61
SCARB2-208ENST00000638372 IGLL1P15814 213 aa11.25□□□□□ -0.61
SCARB2-208ENST00000638372 ZFP36P26651 326 aaKnown RBP11.25□□□□□ -0.61
SCARB2-208ENST00000638372 FOXE3Q13461 319 aa11.25□□□□□ -0.61
SCARB2-208ENST00000638372 CTSGP08311 255 aa11.25□□□□□ -0.61
SCARB2-208ENST00000638372 CDPF1Q6NVV7 123 aa11.25□□□□□ -0.61
SCARB2-208ENST00000638372 IGLC2P0DOY2 106 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms