RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 RBMY1CP0DJD4 496 aa5.69□□□□□ -1.5
PNKP-229ENST00000637897 IGLC2P0DOY2 106 aa5.69□□□□□ -1.5
PNKP-229ENST00000637897 RPL7P18124 248 aaKnown RBP5.69□□□□□ -1.5
PNKP-229ENST00000637897 APOC4P55056 127 aa5.69□□□□□ -1.5
PNKP-229ENST00000637897 DEFB1P60022 68 aa5.69□□□□□ -1.5
PNKP-229ENST00000637897 RPL19P84098 196 aaKnown RBP5.69□□□□□ -1.5
PNKP-229ENST00000637897 RBMY1FQ15415 496 aaKnown RBP5.69□□□□□ -1.5
PNKP-229ENST00000637897 TMEM183BQ1AE95 376 aa5.69□□□□□ -1.5
PNKP-229ENST00000637897 CEMP1Q6PRD7 247 aaPredicted RBP5.69□□□□□ -1.5
PNKP-229ENST00000637897 C16orf54Q6UWD8 224 aa5.69□□□□□ -1.5
PNKP-229ENST00000637897 TRPT1Q86TN4 253 aaKnown RBP5.69□□□□□ -1.5
PNKP-229ENST00000637897 ZFP82Q8N141 532 aa5.69□□□□□ -1.5
PNKP-229ENST00000637897 Q8NAQ8 132 aa5.69□□□□□ -1.5
PNKP-229ENST00000637897 CSNK1G2-AS1Q8NCQ2 148 aa5.69□□□□□ -1.5
PNKP-229ENST00000637897 CMTM2Q8TAZ6 248 aa5.69□□□□□ -1.5
PNKP-229ENST00000637897 FMC1Q96HJ9 113 aa5.69□□□□□ -1.5
PNKP-229ENST00000637897 IGF2BP2-AS1Q96M15 143 aa5.69□□□□□ -1.5
PNKP-229ENST00000637897 GPR82Q96P67 336 aa5.69□□□□□ -1.5
PNKP-229ENST00000637897 OSTCQ9NRP0 149 aa5.69□□□□□ -1.5
PNKP-229ENST00000637897 ZNF586Q9NXT0 402 aa5.69□□□□□ -1.5
PNKP-229ENST00000637897 RABAC1Q9UI14 185 aa5.69□□□□□ -1.5
PNKP-229ENST00000637897 KLF12Q9Y4X4 402 aa5.69□□□□□ -1.5
PNKP-229ENST00000637897 X6R8D5 127 aa5.69□□□□□ -1.5
PNKP-229ENST00000637897 TRBV19A0A075B6N1 114 aa5.68□□□□□ -1.5
PNKP-229ENST00000637897 TRAV2A0A0B4J234 112 aa5.68□□□□□ -1.5
PNKP-229ENST00000637897 K7EQM0 130 aa5.68□□□□□ -1.5
PNKP-229ENST00000637897 TYMSP04818 313 aa5.68□□□□□ -1.5
PNKP-229ENST00000637897 FAM3BP58499 235 aaPredicted RBP5.68□□□□□ -1.5
PNKP-229ENST00000637897 NANOS2P60321 138 aaKnown RBP5.68□□□□□ -1.5
PNKP-229ENST00000637897 ERVFC1-1P60608 527 aa5.68□□□□□ -1.5
PNKP-229ENST00000637897 UBE2G1P62253 170 aa5.68□□□□□ -1.5
PNKP-229ENST00000637897 PSG9Q00887 426 aa5.68□□□□□ -1.5
PNKP-229ENST00000637897 BAGE2Q86Y30 109 aa5.68□□□□□ -1.5
PNKP-229ENST00000637897 ARL6IP6Q8N6S5 226 aa5.68□□□□□ -1.5
PNKP-229ENST00000637897 IL36BQ9NZH7 164 aa5.68□□□□□ -1.5
PNKP-229ENST00000637897 TRBV6-1A0A0K0K1D8 114 aa5.67□□□□□ -1.5
PNKP-229ENST00000637897 SERTM2A0A1B0GWG4 89 aa5.67□□□□□ -1.5
PNKP-229ENST00000637897 A0A1W2PPQ1 181 aa5.67□□□□□ -1.5
PNKP-229ENST00000637897 MRPS12O15235 138 aaKnown RBP5.67□□□□□ -1.5
PNKP-229ENST00000637897 BUB3O43684 328 aa5.67□□□□□ -1.5
PNKP-229ENST00000637897 ZNF253O75346 499 aa5.67□□□□□ -1.5
PNKP-229ENST00000637897 IGLV2-8P01709 118 aa5.67□□□□□ -1.5
PNKP-229ENST00000637897 TCRAP04437 139 aa5.67□□□□□ -1.5
PNKP-229ENST00000637897 ZNF688P0C7X2 276 aa5.67□□□□□ -1.5
PNKP-229ENST00000637897 MGST1P10620 155 aaKnown RBP5.67□□□□□ -1.5
PNKP-229ENST00000637897 C1orf194Q5T5A4 169 aa5.67□□□□□ -1.5
PNKP-229ENST00000637897 GDF5OSQ5U4N7 250 aa5.67□□□□□ -1.5
PNKP-229ENST00000637897 FAM231DQ6ZW35 169 aa5.67□□□□□ -1.5
PNKP-229ENST00000637897 OR11H2Q8NH07 326 aa5.67□□□□□ -1.5
PNKP-229ENST00000637897 PHLDA1Q8WV24 401 aaPredicted RBP5.67□□□□□ -1.5
PNKP-229ENST00000637897 SAV1Q9H4B6 383 aaPredicted RBP5.67□□□□□ -1.5
PNKP-229ENST00000637897 AAMDCQ9H7C9 122 aa5.67□□□□□ -1.5
PNKP-229ENST00000637897 DYNC1H1Q14204 4646 aaKnown RBP5.67□□□□□ -1.5
PNKP-229ENST00000637897 HECTD4Q9Y4D8 3996 aa5.66□□□□□ -1.5
PNKP-229ENST00000637897 C5orf52A6NGY3 159 aa5.66□□□□□ -1.5
PNKP-229ENST00000637897 FBLL1A6NHQ2 334 aaKnown RBP5.66□□□□□ -1.5
PNKP-229ENST00000637897 SOCS3O14543 225 aa5.66□□□□□ -1.5
PNKP-229ENST00000637897 CA1P00915 261 aaPredicted RBP5.66□□□□□ -1.5
PNKP-229ENST00000637897 LTAP01374 205 aa5.66□□□□□ -1.5
PNKP-229ENST00000637897 TRGC2P03986 189 aa5.66□□□□□ -1.5
PNKP-229ENST00000637897 CSN1S1P47710 185 aa5.66□□□□□ -1.5
PNKP-229ENST00000637897 MEOX2P50222 304 aa5.66□□□□□ -1.5
PNKP-229ENST00000637897 GNG5P63218 68 aa5.66□□□□□ -1.5
PNKP-229ENST00000637897 OR5I1Q13606 314 aa5.66□□□□□ -1.5
PNKP-229ENST00000637897 COX19Q49B96 90 aa5.66□□□□□ -1.5
PNKP-229ENST00000637897 IBA57Q5T440 356 aaKnown RBP5.66□□□□□ -1.5
PNKP-229ENST00000637897 SIGLEC15Q6ZMC9 328 aa5.66□□□□□ -1.5
PNKP-229ENST00000637897 OR8I2Q8N0Y5 310 aa5.66□□□□□ -1.5
PNKP-229ENST00000637897 GRAMD2BQ96HH9 432 aa5.66□□□□□ -1.5
PNKP-229ENST00000637897 LINC00479Q96M42 142 aa5.66□□□□□ -1.5
PNKP-229ENST00000637897 METTL26Q96S19 204 aa5.66□□□□□ -1.5
PNKP-229ENST00000637897 C11orf68Q9H3H3 251 aaKnown RBP5.66□□□□□ -1.5
PNKP-229ENST00000637897 CLEC5AQ9NY25 188 aa5.66□□□□□ -1.5
PNKP-229ENST00000637897 V9GYV3 84 aa5.66□□□□□ -1.5
PNKP-229ENST00000637897 A0A087X0K7 114 aa5.65□□□□□ -1.5
PNKP-229ENST00000637897 TRAV34A0A0B4J273 112 aa5.65□□□□□ -1.5
PNKP-229ENST00000637897 IGHV4-28A0A0C4DH34 117 aa5.65□□□□□ -1.5
PNKP-229ENST00000637897 NUPR2A6NF83 97 aa5.65□□□□□ -1.5
PNKP-229ENST00000637897 H3BTX0 84 aa5.65□□□□□ -1.5
PNKP-229ENST00000637897 SLC17A3O00476 420 aa5.65□□□□□ -1.5
PNKP-229ENST00000637897 LY6G6CO95867 125 aa5.65□□□□□ -1.5
PNKP-229ENST00000637897 SNRPCP09234 159 aaKnown RBP5.65□□□□□ -1.5
PNKP-229ENST00000637897 SNRPEP62304 92 aaKnown RBP5.65□□□□□ -1.5
PNKP-229ENST00000637897 EXOC3-AS1Q8N2X6 119 aa5.65□□□□□ -1.5
PNKP-229ENST00000637897 TMEM75Q8N9X5 138 aa5.65□□□□□ -1.5
PNKP-229ENST00000637897 ZNF492Q9P255 531 aa5.65□□□□□ -1.5
PNKP-229ENST00000637897 APLNQ9ULZ1 77 aa5.65□□□□□ -1.5
PNKP-229ENST00000637897 RPH3ALQ9UNE2 315 aa5.65□□□□□ -1.5
PNKP-229ENST00000637897 CELA1Q9UNI1 258 aa5.65□□□□□ -1.5
PNKP-229ENST00000637897 ZFP30Q9Y2G7 519 aa5.65□□□□□ -1.5
PNKP-229ENST00000637897 KIAA1109Q2LD37 5005 aa5.65□□□□□ -1.51
PNKP-229ENST00000637897 SMIM27A0A1W2PRY6 76 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 A0A1W2PS18 150 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 ZNF705GA8MUZ8 300 aaPredicted RBP5.64□□□□□ -1.51
PNKP-229ENST00000637897 H3BMM0 161 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 PHOX2AO14813 284 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 GATCO43716 136 aaKnown RBP5.64□□□□□ -1.51
PNKP-229ENST00000637897 HIST1H2BKO60814 126 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 HIST1H2BJP06899 126 aa5.64□□□□□ -1.51
PNKP-229ENST00000637897 HIST1H2BOP23527 126 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms