RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 RNASE4P34096 147 aaKnown RBP12.42□□□□□ -0.42
CLN6-218ENST00000637223 BTN1A1Q13410 526 aa12.42□□□□□ -0.42
CLN6-218ENST00000637223 PRR9Q5T870 116 aa12.42□□□□□ -0.42
CLN6-218ENST00000637223 ZFAND2AQ8N6M9 145 aa12.42□□□□□ -0.42
CLN6-218ENST00000637223 CYB561D1Q8N8Q1 229 aa12.42□□□□□ -0.42
CLN6-218ENST00000637223 LINC01587Q99440 93 aa12.42□□□□□ -0.42
CLN6-218ENST00000637223 ATG101Q9BSB4 218 aa12.42□□□□□ -0.42
CLN6-218ENST00000637223 TMEM218A2RU14 115 aa12.41□□□□□ -0.42
CLN6-218ENST00000637223 C7orf71A4D174 169 aa12.41□□□□□ -0.42
CLN6-218ENST00000637223 KLLNB2CW77 178 aa12.41□□□□□ -0.42
CLN6-218ENST00000637223 K7EQM0 130 aa12.41□□□□□ -0.42
CLN6-218ENST00000637223 PEX7O00628 323 aa12.41□□□□□ -0.42
CLN6-218ENST00000637223 PRM2P04554 102 aa12.41□□□□□ -0.42
CLN6-218ENST00000637223 GPX1P07203 203 aa12.41□□□□□ -0.42
CLN6-218ENST00000637223 TOR2AQ5JU69 321 aa12.41□□□□□ -0.42
CLN6-218ENST00000637223 CASC10Q5T4H9 136 aa12.41□□□□□ -0.42
CLN6-218ENST00000637223 CCDC28AQ8IWP9 274 aa12.41□□□□□ -0.42
CLN6-218ENST00000637223 LINC00479Q96M42 142 aa12.41□□□□□ -0.42
CLN6-218ENST00000637223 NEU1Q99519 415 aa12.41□□□□□ -0.42
CLN6-218ENST00000637223 TRAV34A0A0B4J273 112 aa12.4□□□□□ -0.42
CLN6-218ENST00000637223 ZNF705GA8MUZ8 300 aaPredicted RBP12.4□□□□□ -0.42
CLN6-218ENST00000637223 C11orf68Q9H3H3 251 aaKnown RBP12.4□□□□□ -0.42
CLN6-218ENST00000637223 TREM1Q9NP99 234 aa12.4□□□□□ -0.42
CLN6-218ENST00000637223 PSG8Q9UQ74 426 aa12.4□□□□□ -0.42
CLN6-218ENST00000637223 DYNC2H1Q8NCM8 4307 aaKnown RBP12.39□□□□□ -0.43
CLN6-218ENST00000637223 TRBV7-9A0A0J9YWB2 115 aa12.39□□□□□ -0.43
CLN6-218ENST00000637223 SMIM9A6NGZ8 99 aa12.39□□□□□ -0.43
CLN6-218ENST00000637223 TMEM250H0YL14 139 aa12.39□□□□□ -0.43
CLN6-218ENST00000637223 IGLV2-11P01706 119 aa12.39□□□□□ -0.43
CLN6-218ENST00000637223 HTN1P15515 57 aa12.39□□□□□ -0.43
CLN6-218ENST00000637223 FLI1Q01543 452 aaPredicted RBP12.39□□□□□ -0.43
CLN6-218ENST00000637223 MEF2BQ02080 365 aaPredicted RBP12.39□□□□□ -0.43
CLN6-218ENST00000637223 RRN3P1Q2M238 152 aa12.39□□□□□ -0.43
CLN6-218ENST00000637223 C10orf91Q5T1B1 145 aa12.39□□□□□ -0.43
CLN6-218ENST00000637223 PRNTQ86SH4 94 aa12.39□□□□□ -0.43
CLN6-218ENST00000637223 TMEM256Q8N2U0 113 aa12.39□□□□□ -0.43
CLN6-218ENST00000637223 TMEM75Q8N9X5 138 aa12.39□□□□□ -0.43
CLN6-218ENST00000637223 HIST1H2BAQ96A08 127 aa12.39□□□□□ -0.43
CLN6-218ENST00000637223 TVP23CQ96ET8 276 aa12.39□□□□□ -0.43
CLN6-218ENST00000637223 C20orf144Q9BQM9 153 aa12.39□□□□□ -0.43
CLN6-218ENST00000637223 TCEAL7Q9BRU2 100 aa12.39□□□□□ -0.43
CLN6-218ENST00000637223 NIPSNAP3BQ9BS92 247 aa12.39□□□□□ -0.43
CLN6-218ENST00000637223 SEC11CQ9BY50 192 aa12.39□□□□□ -0.43
CLN6-218ENST00000637223 LENEPQ9Y5L5 61 aa12.39□□□□□ -0.43
CLN6-218ENST00000637223 C11orf94C9JXX5 98 aa12.38□□□□□ -0.43
CLN6-218ENST00000637223 F6UZH7 168 aa12.38□□□□□ -0.43
CLN6-218ENST00000637223 H7BYZ3 331 aa12.38□□□□□ -0.43
CLN6-218ENST00000637223 EMP1P54849 157 aa12.38□□□□□ -0.43
CLN6-218ENST00000637223 Q6ZQT7 251 aa12.38□□□□□ -0.43
CLN6-218ENST00000637223 PDE6DO43924 150 aa12.37□□□□□ -0.43
CLN6-218ENST00000637223 AZU1P20160 251 aa12.37□□□□□ -0.43
CLN6-218ENST00000637223 TAS2R60P59551 318 aa12.37□□□□□ -0.43
CLN6-218ENST00000637223 MUC7Q8TAX7 377 aa12.37□□□□□ -0.43
CLN6-218ENST00000637223 NDFIP1Q9BT67 221 aa12.37□□□□□ -0.43
CLN6-218ENST00000637223 CARHSP1Q9Y2V2 147 aaKnown RBP12.37□□□□□ -0.43
CLN6-218ENST00000637223 STAB2Q8WWQ8 2551 aa12.36□□□□□ -0.43
CLN6-218ENST00000637223 SCO2A0A1W2PP80 73 aa12.36□□□□□ -0.43
CLN6-218ENST00000637223 ZNF324O75467 553 aaPredicted RBP12.36□□□□□ -0.43
CLN6-218ENST00000637223 SRSF3P84103 164 aaKnown RBP12.36□□□□□ -0.43
CLN6-218ENST00000637223 IL17DQ8TAD2 202 aa12.36□□□□□ -0.43
CLN6-218ENST00000637223 C8orf49Q96NF6 230 aa12.36□□□□□ -0.43
CLN6-218ENST00000637223 LCE6AA0A183 80 aa12.35□□□□□ -0.43
CLN6-218ENST00000637223 FBLL1A6NHQ2 334 aaKnown RBP12.35□□□□□ -0.43
CLN6-218ENST00000637223 SRP19P09132 144 aaKnown RBP12.35□□□□□ -0.43
CLN6-218ENST00000637223 SFTA3P0C7M3 94 aa12.35□□□□□ -0.43
CLN6-218ENST00000637223 AKR1C3P42330 323 aa12.35□□□□□ -0.43
CLN6-218ENST00000637223 FAM74A3Q4VXF1 159 aa12.35□□□□□ -0.43
CLN6-218ENST00000637223 Q86TA4 180 aa12.35□□□□□ -0.43
CLN6-218ENST00000637223 DNAH7Q8WXX0 4024 aa12.34□□□□□ -0.43
CLN6-218ENST00000637223 TMEM189A5PLL7 270 aa12.34□□□□□ -0.43
CLN6-218ENST00000637223 NANOS2P60321 138 aaKnown RBP12.34□□□□□ -0.43
CLN6-218ENST00000637223 UBE2G1P62253 170 aa12.34□□□□□ -0.43
CLN6-218ENST00000637223 C11orf45Q8TAV5 145 aa12.34□□□□□ -0.43
CLN6-218ENST00000637223 PYGO2Q9BRQ0 406 aa12.34□□□□□ -0.43
CLN6-218ENST00000637223 CELA1Q9UNI1 258 aa12.34□□□□□ -0.43
CLN6-218ENST00000637223 SACSQ9NZJ4 4579 aa12.33□□□□□ -0.43
CLN6-218ENST00000637223 C9JQL5 133 aa12.33□□□□□ -0.44
CLN6-218ENST00000637223 F8W036 122 aa12.33□□□□□ -0.44
CLN6-218ENST00000637223 SOHLH1Q5JUK2 328 aa12.33□□□□□ -0.44
CLN6-218ENST00000637223 MUC21Q5SSG8 566 aa12.33□□□□□ -0.44
CLN6-218ENST00000637223 SAPCD1Q5SSQ6 148 aa12.33□□□□□ -0.44
CLN6-218ENST00000637223 Q6AWC8 147 aa12.33□□□□□ -0.44
CLN6-218ENST00000637223 C2CD4CQ8TF44 421 aa12.33□□□□□ -0.44
CLN6-218ENST00000637223 FMC1Q96HJ9 113 aa12.33□□□□□ -0.44
CLN6-218ENST00000637223 KLF12Q9Y4X4 402 aa12.33□□□□□ -0.44
CLN6-218ENST00000637223 CBY3A6NI87 242 aa12.32□□□□□ -0.44
CLN6-218ENST00000637223 ZNF80P51504 273 aaPredicted RBP12.32□□□□□ -0.44
CLN6-218ENST00000637223 TMEM183BQ1AE95 376 aa12.32□□□□□ -0.44
CLN6-218ENST00000637223 SMUG1Q53HV7 270 aa12.32□□□□□ -0.44
CLN6-218ENST00000637223 ZFAND6Q6FIF0 208 aa12.32□□□□□ -0.44
CLN6-218ENST00000637223 SVBPQ8N300 66 aa12.32□□□□□ -0.44
CLN6-218ENST00000637223 C11orf52Q96A22 123 aa12.32□□□□□ -0.44
CLN6-218ENST00000637223 C16orf74Q96GX8 76 aa12.32□□□□□ -0.44
CLN6-218ENST00000637223 NAGKQ9UJ70 344 aa12.32□□□□□ -0.44
CLN6-218ENST00000637223 IGHV1OR15-1A0A075B7D0 117 aa12.31□□□□□ -0.44
CLN6-218ENST00000637223 TRAV21A0A0B4J279 112 aa12.31□□□□□ -0.44
CLN6-218ENST00000637223 PLAC8L1A1L4L8 177 aa12.31□□□□□ -0.44
CLN6-218ENST00000637223 CXorf65A6NEN9 183 aa12.31□□□□□ -0.44
CLN6-218ENST00000637223 GCGP01275 180 aa12.31□□□□□ -0.44
CLN6-218ENST00000637223 FAM222AQ5U5X8 452 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms