RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 OR5I1Q13606 314 aa12.87□□□□□ -0.35
CLN6-214ENST00000636314 Q5BKY6 102 aa12.87□□□□□ -0.35
CLN6-214ENST00000636314 Q6ZTI0 123 aa12.87□□□□□ -0.35
CLN6-214ENST00000636314 INO80EQ8NBZ0 244 aaPredicted RBP12.87□□□□□ -0.35
CLN6-214ENST00000636314 OR2G3Q8NGZ4 309 aa12.87□□□□□ -0.35
CLN6-214ENST00000636314 PSMG3Q9BT73 122 aaPredicted RBP12.87□□□□□ -0.35
CLN6-214ENST00000636314 IGHV1OR15-1A0A075B7D0 117 aa12.86□□□□□ -0.35
CLN6-214ENST00000636314 FXYD6-FXYD2A0A087WZ82 144 aa12.86□□□□□ -0.35
CLN6-214ENST00000636314 ATP6V0CP27449 155 aa12.86□□□□□ -0.35
CLN6-214ENST00000636314 ZNF575Q86XF7 245 aa12.86□□□□□ -0.35
CLN6-214ENST00000636314 ARPC5LQ9BPX5 153 aa12.86□□□□□ -0.35
CLN6-214ENST00000636314 TRGV2A0A075B6R0 118 aa12.85□□□□□ -0.35
CLN6-214ENST00000636314 PGPA6NDG6 321 aa12.85□□□□□ -0.35
CLN6-214ENST00000636314 ARL14EPLP0DKL9 152 aa12.85□□□□□ -0.35
CLN6-214ENST00000636314 TCL1AP56279 114 aa12.85□□□□□ -0.35
CLN6-214ENST00000636314 FAM3BP58499 235 aaPredicted RBP12.85□□□□□ -0.35
CLN6-214ENST00000636314 IBA57Q5T440 356 aaKnown RBP12.85□□□□□ -0.35
CLN6-214ENST00000636314 GNPNAT1Q96EK6 184 aaPredicted RBP12.85□□□□□ -0.35
CLN6-214ENST00000636314 KRTAP4-5Q9BYR2 181 aa12.85□□□□□ -0.35
CLN6-214ENST00000636314 TMPRSS5Q9H3S3 457 aa12.85□□□□□ -0.35
CLN6-214ENST00000636314 LENEPQ9Y5L5 61 aa12.85□□□□□ -0.35
CLN6-214ENST00000636314 TRAV26-1A0A087WT03 109 aa12.84□□□□□ -0.35
CLN6-214ENST00000636314 TRGV1A0A0A0MS02 117 aa12.84□□□□□ -0.35
CLN6-214ENST00000636314 HOXA5P20719 270 aa12.84□□□□□ -0.35
CLN6-214ENST00000636314 Q6ZQT7 251 aa12.84□□□□□ -0.35
CLN6-214ENST00000636314 OR2T35Q8NGX2 323 aa12.84□□□□□ -0.35
CLN6-214ENST00000636314 RNF222A6NCQ9 220 aa12.83□□□□□ -0.36
CLN6-214ENST00000636314 MBP02144 154 aa12.83□□□□□ -0.36
CLN6-214ENST00000636314 CCL18P55774 89 aa12.83□□□□□ -0.36
CLN6-214ENST00000636314 SERF2P84101 59 aa12.83□□□□□ -0.36
CLN6-214ENST00000636314 SOHLH1Q5JUK2 328 aa12.83□□□□□ -0.36
CLN6-214ENST00000636314 GOLT1AQ6ZVE7 132 aa12.83□□□□□ -0.36
CLN6-214ENST00000636314 TMED6Q8WW62 240 aa12.83□□□□□ -0.36
CLN6-214ENST00000636314 RAB24Q969Q5 203 aa12.83□□□□□ -0.36
CLN6-214ENST00000636314 SH3BGRL3Q9H299 93 aa12.83□□□□□ -0.36
CLN6-214ENST00000636314 TP53TG3Q9ULZ0 132 aa12.83□□□□□ -0.36
CLN6-214ENST00000636314 TNFSF18Q9UNG2 199 aa12.83□□□□□ -0.36
CLN6-214ENST00000636314 KLF12Q9Y4X4 402 aa12.83□□□□□ -0.36
CLN6-214ENST00000636314 HSPG2P98160 4391 aa12.82□□□□□ -0.36
CLN6-214ENST00000636314 BORCS7-ASMTA0A0B4J1R7 106 aa12.82□□□□□ -0.36
CLN6-214ENST00000636314 A0A0J9YY99 117 aa12.82□□□□□ -0.36
CLN6-214ENST00000636314 STAG3L2P0CL84 134 aa12.82□□□□□ -0.36
CLN6-214ENST00000636314 STAG3L3P0CL85 134 aa12.82□□□□□ -0.36
CLN6-214ENST00000636314 ZNF415Q09FC8 603 aa12.82□□□□□ -0.36
CLN6-214ENST00000636314 MUC21Q5SSG8 566 aa12.82□□□□□ -0.36
CLN6-214ENST00000636314 Q6ZR54 194 aa12.82□□□□□ -0.36
CLN6-214ENST00000636314 ARL6IP6Q8N6S5 226 aa12.82□□□□□ -0.36
CLN6-214ENST00000636314 SPINK4O60575 86 aa12.81□□□□□ -0.36
CLN6-214ENST00000636314 Q6AWC8 147 aa12.81□□□□□ -0.36
CLN6-214ENST00000636314 RPL7L1Q6DKI1 246 aaKnown RBP12.81□□□□□ -0.36
CLN6-214ENST00000636314 C18orf15Q96N68 181 aa12.81□□□□□ -0.36
CLN6-214ENST00000636314 GCHFRP30047 84 aa12.8□□□□□ -0.36
CLN6-214ENST00000636314 GNG5P63218 68 aa12.8□□□□□ -0.36
CLN6-214ENST00000636314 ST6GAL2Q96JF0 529 aa12.8□□□□□ -0.36
CLN6-214ENST00000636314 ACTR3CQ9C0K3 210 aaPredicted RBP12.8□□□□□ -0.36
CLN6-214ENST00000636314 MRPL16Q9NX20 251 aaKnown RBP12.8□□□□□ -0.36
CLN6-214ENST00000636314 H3BNG1 76 aa12.79□□□□□ -0.36
CLN6-214ENST00000636314 C1orf134Q5TEV5 83 aa12.79□□□□□ -0.36
CLN6-214ENST00000636314 FAM159AQ6UWV7 190 aa12.79□□□□□ -0.36
CLN6-214ENST00000636314 ZNRF2Q8NHG8 242 aa12.79□□□□□ -0.36
CLN6-214ENST00000636314 NAGKQ9UJ70 344 aa12.79□□□□□ -0.36
CLN6-214ENST00000636314 LINC00588Q9Y4M8 146 aa12.79□□□□□ -0.36
CLN6-214ENST00000636314 TRAV8-1A0A0A6YYK1 113 aa12.78□□□□□ -0.36
CLN6-214ENST00000636314 SERTM2A0A1B0GWG4 89 aa12.78□□□□□ -0.36
CLN6-214ENST00000636314 F6UZH7 168 aa12.78□□□□□ -0.36
CLN6-214ENST00000636314 CXorf1O96002 111 aa12.78□□□□□ -0.36
CLN6-214ENST00000636314 SSX7Q7RTT5 188 aa12.78□□□□□ -0.36
CLN6-214ENST00000636314 IQCF2Q8IXL9 164 aa12.78□□□□□ -0.36
CLN6-214ENST00000636314 C5orf17Q8NAS9 161 aa12.78□□□□□ -0.36
CLN6-214ENST00000636314 TMEM167BQ9NRX6 74 aa12.78□□□□□ -0.36
CLN6-214ENST00000636314 TRGV11A0A075B6L2 103 aa12.77□□□□□ -0.37
CLN6-214ENST00000636314 G3V3Q6 166 aa12.77□□□□□ -0.37
CLN6-214ENST00000636314 ARPC5O15511 151 aa12.77□□□□□ -0.37
CLN6-214ENST00000636314 TMEM183BQ1AE95 376 aa12.77□□□□□ -0.37
CLN6-214ENST00000636314 TMEM183AQ8IXX5 376 aa12.77□□□□□ -0.37
CLN6-214ENST00000636314 SUN5Q8TC36 379 aa12.77□□□□□ -0.37
CLN6-214ENST00000636314 NDFIP1Q9BT67 221 aa12.77□□□□□ -0.37
CLN6-214ENST00000636314 TREM1Q9NP99 234 aa12.77□□□□□ -0.37
CLN6-214ENST00000636314 TRAV21A0A0B4J279 112 aa12.76□□□□□ -0.37
CLN6-214ENST00000636314 K7EQM0 130 aa12.76□□□□□ -0.37
CLN6-214ENST00000636314 IGHV3-53P01767 116 aa12.76□□□□□ -0.37
CLN6-214ENST00000636314 TCRAP04437 139 aa12.76□□□□□ -0.37
CLN6-214ENST00000636314 MDFICQ9P1T7 246 aa12.76□□□□□ -0.37
CLN6-214ENST00000636314 NBDYA0A0U1RRE5 68 aa12.75□□□□□ -0.37
CLN6-214ENST00000636314 VSIG2Q96IQ7 327 aa12.75□□□□□ -0.37
CLN6-214ENST00000636314 SGK494Q96LW2 274 aa12.75□□□□□ -0.37
CLN6-214ENST00000636314 CTXND1A0A1B0GTU2 59 aa12.74□□□□□ -0.37
CLN6-214ENST00000636314 C16orf90A8MZG2 172 aa12.74□□□□□ -0.37
CLN6-214ENST00000636314 GGTLC3B5MD39 225 aa12.74□□□□□ -0.37
CLN6-214ENST00000636314 TAAR5O14804 337 aa12.74□□□□□ -0.37
CLN6-214ENST00000636314 SUMO1P63165 101 aaKnown RBP12.74□□□□□ -0.37
CLN6-214ENST00000636314 TDRG1Q3Y452 100 aa12.74□□□□□ -0.37
CLN6-214ENST00000636314 AKR1C8PQ5T2L2 129 aa12.74□□□□□ -0.37
CLN6-214ENST00000636314 TVP23CQ96ET8 276 aa12.74□□□□□ -0.37
CLN6-214ENST00000636314 SPXQ9BT56 116 aa12.74□□□□□ -0.37
CLN6-214ENST00000636314 A0A096LPF7 62 aa12.72□□□□□ -0.37
CLN6-214ENST00000636314 SMLR1H3BR10 107 aa12.72□□□□□ -0.37
CLN6-214ENST00000636314 PAX4O43316 350 aa12.72□□□□□ -0.37
CLN6-214ENST00000636314 ZNF726P1Q15940 193 aa12.72□□□□□ -0.37
CLN6-214ENST00000636314 ESRGQ1W209 222 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms