RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 DIRC3C9JPN6 131 aa13.2□□□□□ -0.3
CLN6-213ENST00000636212 SPINK4O60575 86 aa13.2□□□□□ -0.3
CLN6-213ENST00000636212 PRR9Q5T870 116 aa13.2□□□□□ -0.3
CLN6-213ENST00000636212 C6orf223Q8N319 242 aa13.2□□□□□ -0.3
CLN6-213ENST00000636212 OR10G4Q8NGN3 311 aa13.2□□□□□ -0.3
CLN6-213ENST00000636212 OR10G9Q8NGN4 311 aa13.2□□□□□ -0.3
CLN6-213ENST00000636212 OR10G7Q8NGN6 311 aa13.2□□□□□ -0.3
CLN6-213ENST00000636212 RPH3ALQ9UNE2 315 aa13.2□□□□□ -0.3
CLN6-213ENST00000636212 PGPA6NDG6 321 aa13.19□□□□□ -0.3
CLN6-213ENST00000636212 TTC32Q5I0X7 151 aa13.19□□□□□ -0.3
CLN6-213ENST00000636212 FAM159AQ6UWV7 190 aa13.19□□□□□ -0.3
CLN6-213ENST00000636212 Q9H8V8 135 aa13.19□□□□□ -0.3
CLN6-213ENST00000636212 WFDC1Q9HC57 220 aa13.19□□□□□ -0.3
CLN6-213ENST00000636212 TP53TG3Q9ULZ0 132 aa13.19□□□□□ -0.3
CLN6-213ENST00000636212 SLAQ13239 276 aa13.18□□□□□ -0.3
CLN6-213ENST00000636212 ARL6IP6Q8N6S5 226 aa13.18□□□□□ -0.3
CLN6-213ENST00000636212 TMED6Q8WW62 240 aa13.18□□□□□ -0.3
CLN6-213ENST00000636212 RAB2AP61019 212 aa13.17□□□□□ -0.3
CLN6-213ENST00000636212 MUC21Q5SSG8 566 aa13.17□□□□□ -0.3
CLN6-213ENST00000636212 ST6GAL2Q96JF0 529 aa13.17□□□□□ -0.3
CLN6-213ENST00000636212 MRPL16Q9NX20 251 aaKnown RBP13.17□□□□□ -0.3
CLN6-213ENST00000636212 TRGV11A0A075B6L2 103 aa13.16□□□□□ -0.3
CLN6-213ENST00000636212 MBP02144 154 aa13.16□□□□□ -0.3
CLN6-213ENST00000636212 CDC34P49427 236 aaPredicted RBP13.16□□□□□ -0.3
CLN6-213ENST00000636212 Q6AWC8 147 aa13.16□□□□□ -0.3
CLN6-213ENST00000636212 HSD17B11Q8NBQ5 300 aa13.16□□□□□ -0.3
CLN6-213ENST00000636212 UPK3BQ9BT76 320 aa13.16□□□□□ -0.3
CLN6-213ENST00000636212 MRPS16Q9Y3D3 137 aaKnown RBP13.16□□□□□ -0.3
CLN6-213ENST00000636212 ICOSQ9Y6W8 199 aa13.16□□□□□ -0.3
CLN6-213ENST00000636212 HECTD4Q9Y4D8 3996 aa13.15□□□□□ -0.3
CLN6-213ENST00000636212 PAX4O43316 350 aa13.15□□□□□ -0.3
CLN6-213ENST00000636212 EIF3GO75821 320 aaKnown RBP eCLIP13.15□□□□□ -0.3
CLN6-213ENST00000636212 IGHV3-53P01767 116 aa13.15□□□□□ -0.3
CLN6-213ENST00000636212 MED14OSP0DP75 135 aa13.15□□□□□ -0.3
CLN6-213ENST00000636212 ESRGQ1W209 222 aa13.15□□□□□ -0.3
CLN6-213ENST00000636212 Q6ZQT7 251 aa13.15□□□□□ -0.3
CLN6-213ENST00000636212 GOLT1AQ6ZVE7 132 aa13.15□□□□□ -0.3
CLN6-213ENST00000636212 OR2T35Q8NGX2 323 aa13.15□□□□□ -0.3
CLN6-213ENST00000636212 AQP10Q96PS8 301 aa13.15□□□□□ -0.3
CLN6-213ENST00000636212 SPXQ9BT56 116 aa13.15□□□□□ -0.3
CLN6-213ENST00000636212 PRO0255Q9UI72 69 aa13.15□□□□□ -0.3
CLN6-213ENST00000636212 HMGB3O15347 200 aaKnown RBP13.14□□□□□ -0.31
CLN6-213ENST00000636212 TMEM183BQ1AE95 376 aa13.14□□□□□ -0.31
CLN6-213ENST00000636212 TMEM183AQ8IXX5 376 aa13.14□□□□□ -0.31
CLN6-213ENST00000636212 INO80EQ8NBZ0 244 aaPredicted RBP13.14□□□□□ -0.31
CLN6-213ENST00000636212 OR2G3Q8NGZ4 309 aa13.14□□□□□ -0.31
CLN6-213ENST00000636212 VSIG2Q96IQ7 327 aa13.14□□□□□ -0.31
CLN6-213ENST00000636212 NDFIP1Q9BT67 221 aa13.14□□□□□ -0.31
CLN6-213ENST00000636212 PSMG3Q9BT73 122 aaPredicted RBP13.14□□□□□ -0.31
CLN6-213ENST00000636212 NAGKQ9UJ70 344 aa13.14□□□□□ -0.31
CLN6-213ENST00000636212 A0A096LPF7 62 aa13.13□□□□□ -0.31
CLN6-213ENST00000636212 SERTM2A0A1B0GWG4 89 aa13.13□□□□□ -0.31
CLN6-213ENST00000636212 K7EQM0 130 aa13.13□□□□□ -0.31
CLN6-213ENST00000636212 SERF2P84101 59 aa13.13□□□□□ -0.31
CLN6-213ENST00000636212 HHLA3Q9XRX5 114 aa13.13□□□□□ -0.31
CLN6-213ENST00000636212 FXYD6-FXYD2A0A087WZ82 144 aa13.12□□□□□ -0.31
CLN6-213ENST00000636212 TRAV21A0A0B4J279 112 aa13.12□□□□□ -0.31
CLN6-213ENST00000636212 TRGV4A0A0C4DH28 118 aa13.12□□□□□ -0.31
CLN6-213ENST00000636212 A0A1W2PPQ1 181 aa13.12□□□□□ -0.31
CLN6-213ENST00000636212 ARL14EPLP0DKL9 152 aa13.12□□□□□ -0.31
CLN6-213ENST00000636212 TREM1Q9NP99 234 aa13.12□□□□□ -0.31
CLN6-213ENST00000636212 BORCS7-ASMTA0A0B4J1R7 106 aa13.11□□□□□ -0.31
CLN6-213ENST00000636212 G3V3Q6 166 aa13.11□□□□□ -0.31
CLN6-213ENST00000636212 STAG3L2P0CL84 134 aa13.11□□□□□ -0.31
CLN6-213ENST00000636212 STAG3L3P0CL85 134 aa13.11□□□□□ -0.31
CLN6-213ENST00000636212 ATP6V0CP27449 155 aa13.11□□□□□ -0.31
CLN6-213ENST00000636212 TNP2Q05952 138 aa13.11□□□□□ -0.31
CLN6-213ENST00000636212 Q5BKY6 102 aa13.11□□□□□ -0.31
CLN6-213ENST00000636212 RAB24Q969Q5 203 aa13.11□□□□□ -0.31
CLN6-213ENST00000636212 MDFICQ9P1T7 246 aa13.11□□□□□ -0.31
CLN6-213ENST00000636212 MRPL23Q16540 153 aaKnown RBP13.1□□□□□ -0.31
CLN6-213ENST00000636212 C5orf17Q8NAS9 161 aa13.1□□□□□ -0.31
CLN6-213ENST00000636212 PCNPQ8WW12 178 aaKnown RBP13.1□□□□□ -0.31
CLN6-213ENST00000636212 KCNS1Q96KK3 526 aa13.1□□□□□ -0.31
CLN6-213ENST00000636212 C8orf49Q96NF6 230 aa13.1□□□□□ -0.31
CLN6-213ENST00000636212 ACTR3CQ9C0K3 210 aaPredicted RBP13.1□□□□□ -0.31
CLN6-213ENST00000636212 TMEM167BQ9NRX6 74 aa13.1□□□□□ -0.31
CLN6-213ENST00000636212 TNFSF18Q9UNG2 199 aa13.1□□□□□ -0.31
CLN6-213ENST00000636212 CXorf1O96002 111 aa13.09□□□□□ -0.31
CLN6-213ENST00000636212 BTF3P20290 206 aaKnown RBP13.09□□□□□ -0.31
CLN6-213ENST00000636212 GCHFRP30047 84 aa13.09□□□□□ -0.31
CLN6-213ENST00000636212 CRYBA4P53673 196 aa13.09□□□□□ -0.31
CLN6-213ENST00000636212 GNG5P63218 68 aa13.09□□□□□ -0.31
CLN6-213ENST00000636212 TDRG1Q3Y452 100 aa13.09□□□□□ -0.31
CLN6-213ENST00000636212 SDF2L1Q9HCN8 221 aa13.09□□□□□ -0.31
CLN6-213ENST00000636212 TRAV8-1A0A0A6YYK1 113 aa13.08□□□□□ -0.32
CLN6-213ENST00000636212 RNF222A6NCQ9 220 aa13.08□□□□□ -0.32
CLN6-213ENST00000636212 F6UZH7 168 aa13.08□□□□□ -0.32
CLN6-213ENST00000636212 SIVA1O15304 175 aa13.08□□□□□ -0.32
CLN6-213ENST00000636212 FHL2Q14192 279 aa13.08□□□□□ -0.32
CLN6-213ENST00000636212 Q6ZNX1 250 aa13.08□□□□□ -0.32
CLN6-213ENST00000636212 IQCF2Q8IXL9 164 aa13.08□□□□□ -0.32
CLN6-213ENST00000636212 RASL10AQ92737 203 aa13.08□□□□□ -0.32
CLN6-213ENST00000636212 M0R2P5 195 aa13.07□□□□□ -0.32
CLN6-213ENST00000636212 ZFP69Q49AA0 526 aa13.07□□□□□ -0.32
CLN6-213ENST00000636212 DNAH2Q9P225 4427 aa13.07□□□□□ -0.32
CLN6-213ENST00000636212 C16orf90A8MZG2 172 aa13.06□□□□□ -0.32
CLN6-213ENST00000636212 ORM1P02763 201 aa13.06□□□□□ -0.32
CLN6-213ENST00000636212 TCRAP04437 139 aa13.06□□□□□ -0.32
CLN6-213ENST00000636212 SRIP30626 198 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms