RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 SLC25A5P05141 298 aaKnown RBP3.98□□□□□ -1.77
LINC00550-202ENST00000629570 CRISP2P16562 243 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 TSPOP30536 169 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 LEPP41159 167 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 NANOS2P60321 138 aaKnown RBP3.98□□□□□ -1.77
LINC00550-202ENST00000629570 EIF5AP63241 154 aaKnown RBP3.98□□□□□ -1.77
LINC00550-202ENST00000629570 BTN1A1Q13410 526 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 ANKRD39Q53RE8 183 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 FAM74A1Q5RGS3 127 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 CASC10Q5T4H9 136 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 TMEM78Q5T7P6 136 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 Q6ZQT7 251 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 SLC51BQ86UW2 128 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 ZFAND2AQ8N6M9 145 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 C5orf17Q8NAS9 161 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 CMTM2Q8TAZ6 248 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 SFT2D1Q8WV19 159 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 LINC00477Q96M19 166 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 NEU1Q99519 415 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 TMEM167BQ9NRX6 74 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 ZNF492Q9P255 531 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 LOC102723971A0A1B0GUV8 181 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 A0A1W2PRE2 83 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 PLAC8L1A1L4L8 177 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 C7orf71A4D174 169 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 RBAKDNA6NC62 111 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 SMIM9A6NGZ8 99 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 FAM74A7A6NL05 159 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 TCRAP04437 139 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 HTN1P15515 57 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 AZU1P20160 251 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 RNASE4P34096 147 aaKnown RBP3.97□□□□□ -1.77
LINC00550-202ENST00000629570 ZNF138P52744 262 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 SUMO1P63165 101 aaKnown RBP3.97□□□□□ -1.77
LINC00550-202ENST00000629570 RRN3P1Q2M238 152 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 FAM222AQ5U5X8 452 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 ZNF767PQ75MW2 155 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 TMEM256Q8N2U0 113 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 C11orf45Q8TAV5 145 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 RXFP4Q8TDU9 374 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 MBD3L1Q8WWY6 194 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 TVP23CQ96ET8 276 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 SGK494Q96LW2 274 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 LINC01587Q99440 93 aa3.97□□□□□ -1.77
LINC00550-202ENST00000629570 TRAV34A0A0B4J273 112 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 TMEM189A5PLL7 270 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 F6UZH7 168 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 H7BYZ3 331 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 ZNF324O75467 553 aaPredicted RBP3.96□□□□□ -1.78
LINC00550-202ENST00000629570 IFNA7P01567 189 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 IGLV2-11P01706 119 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 GPX1P07203 203 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 ATP5G3P48201 142 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 SULT1A2P50226 295 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 TAS2R60P59551 318 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 CCL20P78556 96 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 C12orf74Q32Q52 190 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 CST9LP1Q5W188 147 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 EIF5AL1Q6IS14 154 aaKnown RBP3.96□□□□□ -1.78
LINC00550-202ENST00000629570 ALKAL2Q6UX46 152 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 DPPA3Q6W0C5 159 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 Q6ZTC4 211 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 CYB561D1Q8N8Q1 229 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 RNASE8Q8TDE3 154 aaKnown RBP3.96□□□□□ -1.78
LINC00550-202ENST00000629570 PHLDA1Q8WV24 401 aaPredicted RBP3.96□□□□□ -1.78
LINC00550-202ENST00000629570 LINC00479Q96M42 142 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 C20orf144Q9BQM9 153 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 NIPSNAP3BQ9BS92 247 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 ATG101Q9BSB4 218 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 DKK2Q9UBU2 259 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 EPDR1Q9UM22 224 aa3.96□□□□□ -1.78
LINC00550-202ENST00000629570 TRAV1-1A0A0B4J248 108 aa3.95□□□□□ -1.78
LINC00550-202ENST00000629570 TRBV7-9A0A0J9YWB2 115 aa3.95□□□□□ -1.78
LINC00550-202ENST00000629570 SERTM2A0A1B0GWG4 89 aa3.95□□□□□ -1.78
LINC00550-202ENST00000629570 PEX7O00628 323 aa3.95□□□□□ -1.78
LINC00550-202ENST00000629570 PAGE4O60829 102 aa3.95□□□□□ -1.78
LINC00550-202ENST00000629570 NMBP08949 121 aa3.95□□□□□ -1.78
LINC00550-202ENST00000629570 SPART-AS1P0CW21 52 aa3.95□□□□□ -1.78
LINC00550-202ENST00000629570 RAB5CP51148 216 aa3.95□□□□□ -1.78
LINC00550-202ENST00000629570 FLI1Q01543 452 aaPredicted RBP3.95□□□□□ -1.78
LINC00550-202ENST00000629570 MUC21Q5SSG8 566 aa3.95□□□□□ -1.78
LINC00550-202ENST00000629570 CEMP1Q6PRD7 247 aaPredicted RBP3.95□□□□□ -1.78
LINC00550-202ENST00000629570 PRNTQ86SH4 94 aa3.95□□□□□ -1.78
LINC00550-202ENST00000629570 CCDC28AQ8IWP9 274 aa3.95□□□□□ -1.78
LINC00550-202ENST00000629570 ARL6IP6Q8N6S5 226 aa3.95□□□□□ -1.78
LINC00550-202ENST00000629570 TMEM75Q8N9X5 138 aa3.95□□□□□ -1.78
LINC00550-202ENST00000629570 TMEM263Q8WUH6 116 aaKnown RBP3.95□□□□□ -1.78
LINC00550-202ENST00000629570 C16orf74Q96GX8 76 aa3.95□□□□□ -1.78
LINC00550-202ENST00000629570 PYGO2Q9BRQ0 406 aa3.95□□□□□ -1.78
LINC00550-202ENST00000629570 TREM1Q9NP99 234 aa3.95□□□□□ -1.78
LINC00550-202ENST00000629570 GNG13Q9P2W3 67 aa3.95□□□□□ -1.78
LINC00550-202ENST00000629570 TP53TG3Q9ULZ0 132 aa3.95□□□□□ -1.78
LINC00550-202ENST00000629570 IGHV1OR15-1A0A075B7D0 117 aa3.94□□□□□ -1.78
LINC00550-202ENST00000629570 NUPR2A6NF83 97 aa3.94□□□□□ -1.78
LINC00550-202ENST00000629570 CBY3A6NI87 242 aa3.94□□□□□ -1.78
LINC00550-202ENST00000629570 K7EQM0 130 aa3.94□□□□□ -1.78
LINC00550-202ENST00000629570 DEFB130BP0DP73 79 aa3.94□□□□□ -1.78
LINC00550-202ENST00000629570 DEFB130AP0DP74 79 aa3.94□□□□□ -1.78
LINC00550-202ENST00000629570 ZNF80P51504 273 aaPredicted RBP3.94□□□□□ -1.78
LINC00550-202ENST00000629570 Q6AWC8 147 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms