RNA–Protein interactions for RNA: ENST00000628343.2

SOX2-OT-246, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 746 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-246ENST00000628343 DPPA3Q6W0C5 159 aa9.65□□□□□ -0.86
SOX2-OT-246ENST00000628343 C2CD4CQ8TF44 421 aa9.65□□□□□ -0.86
SOX2-OT-246ENST00000628343 SFT2D1Q8WV19 159 aa9.65□□□□□ -0.86
SOX2-OT-246ENST00000628343 LINC00467Q9BRT7 94 aa9.65□□□□□ -0.86
SOX2-OT-246ENST00000628343 DYNC2H1Q8NCM8 4307 aaKnown RBP9.65□□□□□ -0.86
SOX2-OT-246ENST00000628343 LYSTQ99698 3801 aa9.65□□□□□ -0.87
SOX2-OT-246ENST00000628343 DEFB131BA0A096LNP1 70 aa9.64□□□□□ -0.87
SOX2-OT-246ENST00000628343 A0A1B0GV50 99 aa9.64□□□□□ -0.87
SOX2-OT-246ENST00000628343 F6UZH7 168 aa9.64□□□□□ -0.87
SOX2-OT-246ENST00000628343 DAD1P61803 113 aa9.64□□□□□ -0.87
SOX2-OT-246ENST00000628343 SLC51BQ86UW2 128 aa9.64□□□□□ -0.87
SOX2-OT-246ENST00000628343 CCDC28AQ8IWP9 274 aa9.64□□□□□ -0.87
SOX2-OT-246ENST00000628343 CYB561D1Q8N8Q1 229 aa9.64□□□□□ -0.87
SOX2-OT-246ENST00000628343 LINC00479Q96M42 142 aa9.64□□□□□ -0.87
SOX2-OT-246ENST00000628343 ATG101Q9BSB4 218 aa9.64□□□□□ -0.87
SOX2-OT-246ENST00000628343 TIMM8BQ9Y5J9 83 aaPredicted RBP9.64□□□□□ -0.87
SOX2-OT-246ENST00000628343 IGLL5B9A064 214 aa9.63□□□□□ -0.87
SOX2-OT-246ENST00000628343 IFNA7P01567 189 aa9.63□□□□□ -0.87
SOX2-OT-246ENST00000628343 H2AFB1P0C5Y9 115 aa9.63□□□□□ -0.87
SOX2-OT-246ENST00000628343 DEFB130BP0DP73 79 aa9.63□□□□□ -0.87
SOX2-OT-246ENST00000628343 DEFB130AP0DP74 79 aa9.63□□□□□ -0.87
SOX2-OT-246ENST00000628343 ANXA2RQ3ZCQ2 193 aa9.63□□□□□ -0.87
SOX2-OT-246ENST00000628343 Q6AWC8 147 aa9.63□□□□□ -0.87
SOX2-OT-246ENST00000628343 EIF4E3Q8N5X7 224 aaKnown RBP9.63□□□□□ -0.87
SOX2-OT-246ENST00000628343 TMEM75Q8N9X5 138 aa9.63□□□□□ -0.87
SOX2-OT-246ENST00000628343 C11orf72Q8NBR9 251 aa9.63□□□□□ -0.87
SOX2-OT-246ENST00000628343 NKX6-2Q9C056 277 aaPredicted RBP9.63□□□□□ -0.87
SOX2-OT-246ENST00000628343 TREM1Q9NP99 234 aa9.63□□□□□ -0.87
SOX2-OT-246ENST00000628343 NOP10Q9NPE3 64 aaKnown RBP9.63□□□□□ -0.87
SOX2-OT-246ENST00000628343 TP53TG3Q9ULZ0 132 aa9.63□□□□□ -0.87
SOX2-OT-246ENST00000628343 PSG8Q9UQ74 426 aa9.63□□□□□ -0.87
SOX2-OT-246ENST00000628343 TENM2Q9NT68 2774 aa9.63□□□□□ -0.87
SOX2-OT-246ENST00000628343 PLECQ15149 4684 aaKnown RBP9.62□□□□□ -0.87
SOX2-OT-246ENST00000628343 IGHV1OR15-1A0A075B7D0 117 aa9.62□□□□□ -0.87
SOX2-OT-246ENST00000628343 CBY3A6NI87 242 aa9.62□□□□□ -0.87
SOX2-OT-246ENST00000628343 K7EQM0 130 aa9.62□□□□□ -0.87
SOX2-OT-246ENST00000628343 PEX7O00628 323 aa9.62□□□□□ -0.87
SOX2-OT-246ENST00000628343 RGS13O14921 159 aa9.62□□□□□ -0.87
SOX2-OT-246ENST00000628343 ATP5G3P48201 142 aa9.62□□□□□ -0.87
SOX2-OT-246ENST00000628343 NKX2-5P52952 324 aaPredicted RBP9.62□□□□□ -0.87
SOX2-OT-246ENST00000628343 FLI1Q01543 452 aaPredicted RBP9.62□□□□□ -0.87
SOX2-OT-246ENST00000628343 EIF5AL1Q6IS14 154 aaKnown RBP9.62□□□□□ -0.87
SOX2-OT-246ENST00000628343 C8orf49Q96NF6 230 aa9.62□□□□□ -0.87
SOX2-OT-246ENST00000628343 GSN-AS1Q9NRJ2 163 aa9.62□□□□□ -0.87
SOX2-OT-246ENST00000628343 ARL2-SNX15V9GYD0 113 aa9.62□□□□□ -0.87
SOX2-OT-246ENST00000628343 IGHV4-4A0A075B6R2 117 aa9.61□□□□□ -0.87
SOX2-OT-246ENST00000628343 TRAV34A0A0B4J273 112 aa9.61□□□□□ -0.87
SOX2-OT-246ENST00000628343 PAGE4O60829 102 aa9.61□□□□□ -0.87
SOX2-OT-246ENST00000628343 HTN3P15516 51 aa9.61□□□□□ -0.87
SOX2-OT-246ENST00000628343 SULT1A2P50226 295 aa9.61□□□□□ -0.87
SOX2-OT-246ENST00000628343 RAB5CP51148 216 aa9.61□□□□□ -0.87
SOX2-OT-246ENST00000628343 MUC21Q5SSG8 566 aa9.61□□□□□ -0.87
SOX2-OT-246ENST00000628343 CST9LP1Q5W188 147 aa9.61□□□□□ -0.87
SOX2-OT-246ENST00000628343 PRNTQ86SH4 94 aa9.61□□□□□ -0.87
SOX2-OT-246ENST00000628343 LINC00612Q8N6U2 182 aa9.61□□□□□ -0.87
SOX2-OT-246ENST00000628343 ZNF680Q8NEM1 530 aa9.61□□□□□ -0.87
SOX2-OT-246ENST00000628343 LINC00476Q8WZB0 136 aa9.61□□□□□ -0.87
SOX2-OT-246ENST00000628343 NDFIP1Q9BT67 221 aa9.61□□□□□ -0.87
SOX2-OT-246ENST00000628343 APLNQ9ULZ1 77 aa9.61□□□□□ -0.87
SOX2-OT-246ENST00000628343 SNURFLB1AK76 121 aa9.6□□□□□ -0.87
SOX2-OT-246ENST00000628343 ZNF80P51504 273 aaPredicted RBP9.6□□□□□ -0.87
SOX2-OT-246ENST00000628343 CCL20P78556 96 aa9.6□□□□□ -0.87
SOX2-OT-246ENST00000628343 DAZ2Q13117 558 aaKnown RBP9.6□□□□□ -0.87
SOX2-OT-246ENST00000628343 HIST1H2BAQ96A08 127 aa9.6□□□□□ -0.87
SOX2-OT-246ENST00000628343 KLF12Q9Y4X4 402 aa9.6□□□□□ -0.87
SOX2-OT-246ENST00000628343 RYR3Q15413 4870 aa9.59□□□□□ -0.87
SOX2-OT-246ENST00000628343 TRAV1-1A0A0B4J248 108 aa9.59□□□□□ -0.87
SOX2-OT-246ENST00000628343 TRAV21A0A0B4J279 112 aa9.59□□□□□ -0.87
SOX2-OT-246ENST00000628343 FBLL1A6NHQ2 334 aaKnown RBP9.59□□□□□ -0.87
SOX2-OT-246ENST00000628343 TCL1AP56279 114 aa9.59□□□□□ -0.87
SOX2-OT-246ENST00000628343 IBA57Q5T440 356 aaKnown RBP9.59□□□□□ -0.87
SOX2-OT-246ENST00000628343 Q86TA4 180 aa9.59□□□□□ -0.87
SOX2-OT-246ENST00000628343 GAGE12BA1L429 117 aa9.58□□□□□ -0.88
SOX2-OT-246ENST00000628343 GAGE7O76087 117 aa9.58□□□□□ -0.88
SOX2-OT-246ENST00000628343 GCGP01275 180 aa9.58□□□□□ -0.88
SOX2-OT-246ENST00000628343 GAGE12FP0CL80 117 aa9.58□□□□□ -0.88
SOX2-OT-246ENST00000628343 GAGE12GP0CL81 117 aa9.58□□□□□ -0.88
SOX2-OT-246ENST00000628343 GAGE12IP0CL82 117 aa9.58□□□□□ -0.88
SOX2-OT-246ENST00000628343 PPT1P50897 306 aa9.58□□□□□ -0.88
SOX2-OT-246ENST00000628343 TCTAP57738 103 aa9.58□□□□□ -0.88
SOX2-OT-246ENST00000628343 TMEM183BQ1AE95 376 aa9.58□□□□□ -0.88
SOX2-OT-246ENST00000628343 TDRG1Q3Y452 100 aa9.58□□□□□ -0.88
SOX2-OT-246ENST00000628343 FAM159AQ6UWV7 190 aa9.58□□□□□ -0.88
SOX2-OT-246ENST00000628343 Q6ZTI0 123 aa9.58□□□□□ -0.88
SOX2-OT-246ENST00000628343 TMEM183AQ8IXX5 376 aa9.58□□□□□ -0.88
SOX2-OT-246ENST00000628343 TCEAL7Q9BRU2 100 aa9.58□□□□□ -0.88
SOX2-OT-246ENST00000628343 MDFICQ9P1T7 246 aa9.58□□□□□ -0.88
SOX2-OT-246ENST00000628343 NAGKQ9UJ70 344 aa9.58□□□□□ -0.88
SOX2-OT-246ENST00000628343 BOLA1Q9Y3E2 137 aa9.58□□□□□ -0.88
SOX2-OT-246ENST00000628343 ALMS1Q8TCU4 4167 aa9.57□□□□□ -0.88
SOX2-OT-246ENST00000628343 SACSQ9NZJ4 4579 aa9.57□□□□□ -0.88
SOX2-OT-246ENST00000628343 LY6G6CO95867 125 aa9.57□□□□□ -0.88
SOX2-OT-246ENST00000628343 ATP5G1P05496 136 aa9.57□□□□□ -0.88
SOX2-OT-246ENST00000628343 SMUG1Q53HV7 270 aa9.57□□□□□ -0.88
SOX2-OT-246ENST00000628343 SAPCD1Q5SSQ6 148 aa9.57□□□□□ -0.88
SOX2-OT-246ENST00000628343 GNG13Q9P2W3 67 aa9.57□□□□□ -0.88
SOX2-OT-246ENST00000628343 C11orf21Q9P2W6 132 aa9.57□□□□□ -0.88
SOX2-OT-246ENST00000628343 TRGV1A0A0A0MS02 117 aa9.56□□□□□ -0.88
SOX2-OT-246ENST00000628343 SCO2A0A1W2PP80 73 aa9.56□□□□□ -0.88
SOX2-OT-246ENST00000628343 GNRH2O43555 120 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms