RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 TRAV8-2A0A0B4J237 113 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 SMIM31A0A1B0GVY4 71 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 IFITM5A6NNB3 132 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 INS-IGF2F8WCM5 200 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 PPP1R2P9O14990 202 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 PGLYRP1O75594 196 aaPredicted RBP1.89□□□□□ -2.11
CDKL5-208ENST00000624953 SLC22A5O76082 557 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 IGKV1-5P01602 117 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 F2RP25116 425 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 FXYD4P59646 89 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 RND3P61587 244 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 NUTF2P61970 127 aaKnown RBP1.89□□□□□ -2.11
CDKL5-208ENST00000624953 PSG9Q00887 426 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 CLINT1Q14677 625 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 VAMP3Q15836 100 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 SSX1Q16384 188 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 SPINK13Q1W4C9 94 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 C5orf47Q569G3 176 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 AADACL3Q5VUY0 350 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 OR8G2PQ6IF36 304 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 FOXI2Q6ZQN5 318 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 LINC00299Q6ZSB3 139 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 ZNF546Q86UE3 836 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 WFDC10BQ8IUB3 73 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 C14orf178Q8N769 122 aaPredicted RBP1.89□□□□□ -2.11
CDKL5-208ENST00000624953 OR4B1Q8NGF8 309 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 OR4X1Q8NH49 305 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 GNPNAT1Q96EK6 184 aaPredicted RBP1.89□□□□□ -2.11
CDKL5-208ENST00000624953 TMEM56Q96MV1 263 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 LINC00167Q96N53 147 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 METTL26Q96S19 204 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 LCE3DQ9BYE3 92 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 MRPS26Q9BYN8 205 aaKnown RBP1.89□□□□□ -2.11
CDKL5-208ENST00000624953 PPDPFQ9H3Y8 114 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 RBKSQ9H477 322 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 V9GY05 133 aa1.89□□□□□ -2.11
CDKL5-208ENST00000624953 A0A1B0GWB2 263 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 MEIS3P1A6NDR6 274 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 ANKRD65E5RJM6 399 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 H3BNG1 76 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 MYL12BO14950 172 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 MRPS12O15235 138 aaKnown RBP1.88□□□□□ -2.11
CDKL5-208ENST00000624953 CYB5BO43169 146 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 CCNKO75909 580 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 IFNA5P01569 189 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 C1QBP02746 253 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 IL4P05112 153 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 CTXN2P0C2S0 81 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 M6PRP20645 277 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 PSMA1P25786 263 aaKnown RBP1.88□□□□□ -2.11
CDKL5-208ENST00000624953 BTCP35070 178 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 RPL5P46777 297 aaKnown RBP1.88□□□□□ -2.11
CDKL5-208ENST00000624953 PSMB3P49720 205 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 RND2P52198 227 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 GABARAPL2P60520 117 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 HSPE1P61604 102 aaKnown RBP1.88□□□□□ -2.11
CDKL5-208ENST00000624953 SNRPD3P62318 126 aaKnown RBP1.88□□□□□ -2.11
CDKL5-208ENST00000624953 CATR1Q13166 79 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 TRAM1Q15629 374 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 PRSS54Q6PEW0 395 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 IZUMO2Q6UXV1 221 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 CBLN2Q8IUK8 224 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 Q8N814 137 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 BPIFB6Q8NFQ5 453 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 OR4C16Q8NGL9 310 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 OR5H6Q8NGV6 325 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 LINC00052Q96N35 136 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 C7orf50Q9BRJ6 194 aaKnown RBP1.88□□□□□ -2.11
CDKL5-208ENST00000624953 SLC25A39Q9BZJ4 359 aaPredicted RBP1.88□□□□□ -2.11
CDKL5-208ENST00000624953 ATG5Q9H1Y0 275 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 NOP10Q9NPE3 64 aaKnown RBP1.88□□□□□ -2.11
CDKL5-208ENST00000624953 PRNDQ9UKY0 176 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 ANAPC10Q9UM13 185 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 GOLT1BQ9Y3E0 138 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 CBY1Q9Y3M2 126 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 V9GYY9 64 aa1.88□□□□□ -2.11
CDKL5-208ENST00000624953 IGKV1OR2-108A0A075B7D4 117 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 HMGB3O15347 200 aaKnown RBP1.87□□□□□ -2.11
CDKL5-208ENST00000624953 SNAPC5O75971 98 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 INSP01308 110 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 GADD45AP24522 165 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 HLA-DMAP28067 261 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 OR10J1P30954 320 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 TALDO1P37837 337 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 OPRK1P41145 380 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 ETV6P41212 452 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 AP2S1P53680 142 aaPredicted RBP1.87□□□□□ -2.11
CDKL5-208ENST00000624953 TMBIM6P55061 237 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 YPEL3P61236 119 aaPredicted RBP1.87□□□□□ -2.11
CDKL5-208ENST00000624953 B2MP61769 119 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 ZNF90Q03938 601 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 ZNF726P1Q15940 193 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 SMUG1Q53HV7 270 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 LYPD5Q6UWN5 251 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 Q6ZTI0 123 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 TMED4Q7Z7H5 227 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 RNF182Q8N6D2 247 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 CCDC71LQ8N9Z2 235 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms