RNA–Protein interactions for RNA: ENST00000624071.1

LINC01006-208, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

Gene LINC01006, Length 651 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-208ENST00000624071 TMUB2Q71RG4 321 aa13.47□□□□□ -0.25
LINC01006-208ENST00000624071 EIF4E3Q8N5X7 224 aaKnown RBP13.47□□□□□ -0.25
LINC01006-208ENST00000624071 NDUFAF3Q9BU61 184 aa13.47□□□□□ -0.25
LINC01006-208ENST00000624071 TP53TG3Q9ULZ0 132 aa13.47□□□□□ -0.25
LINC01006-208ENST00000624071 HYDINQ4G0P3 5121 aa13.46□□□□□ -0.25
LINC01006-208ENST00000624071 GAGE12BA1L429 117 aa13.46□□□□□ -0.25
LINC01006-208ENST00000624071 MAP1LC3B2A6NCE7 125 aa13.46□□□□□ -0.25
LINC01006-208ENST00000624071 GAGE7O76087 117 aa13.46□□□□□ -0.25
LINC01006-208ENST00000624071 GAGE12FP0CL80 117 aa13.46□□□□□ -0.25
LINC01006-208ENST00000624071 GAGE12GP0CL81 117 aa13.46□□□□□ -0.25
LINC01006-208ENST00000624071 GAGE12IP0CL82 117 aa13.46□□□□□ -0.25
LINC01006-208ENST00000624071 FHITP49789 147 aa13.46□□□□□ -0.25
LINC01006-208ENST00000624071 MUC21Q5SSG8 566 aa13.46□□□□□ -0.25
LINC01006-208ENST00000624071 C5orf17Q8NAS9 161 aa13.46□□□□□ -0.25
LINC01006-208ENST00000624071 MAP1LC3BQ9GZQ8 125 aa13.46□□□□□ -0.25
LINC01006-208ENST00000624071 IGHV1OR15-1A0A075B7D0 117 aa13.45□□□□□ -0.26
LINC01006-208ENST00000624071 F6UZH7 168 aa13.45□□□□□ -0.26
LINC01006-208ENST00000624071 TCRAP04437 139 aa13.45□□□□□ -0.26
LINC01006-208ENST00000624071 TMEM88Q6PEY1 159 aa13.45□□□□□ -0.26
LINC01006-208ENST00000624071 ARL6IP6Q8N6S5 226 aa13.45□□□□□ -0.26
LINC01006-208ENST00000624071 TMED6Q8WW62 240 aa13.45□□□□□ -0.26
LINC01006-208ENST00000624071 TVP23CQ96ET8 276 aa13.45□□□□□ -0.26
LINC01006-208ENST00000624071 LINC00467Q9BRT7 94 aa13.45□□□□□ -0.26
LINC01006-208ENST00000624071 EPDR1Q9UM22 224 aa13.45□□□□□ -0.26
LINC01006-208ENST00000624071 F5H768 121 aa13.44□□□□□ -0.26
LINC01006-208ENST00000624071 SEC11BP0C7V7 166 aa13.44□□□□□ -0.26
LINC01006-208ENST00000624071 ANXA2RQ3ZCQ2 193 aa13.44□□□□□ -0.26
LINC01006-208ENST00000624071 TCTE3Q8IZS6 198 aa13.44□□□□□ -0.26
LINC01006-208ENST00000624071 C11orf72Q8NBR9 251 aa13.44□□□□□ -0.26
LINC01006-208ENST00000624071 ZNF680Q8NEM1 530 aa13.44□□□□□ -0.26
LINC01006-208ENST00000624071 FAM213BQ8TBF2 198 aa13.44□□□□□ -0.26
LINC01006-208ENST00000624071 KLF12Q9Y4X4 402 aa13.44□□□□□ -0.26
LINC01006-208ENST00000624071 LENEPQ9Y5L5 61 aa13.44□□□□□ -0.26
LINC01006-208ENST00000624071 A0A1W2PRE2 83 aa13.43□□□□□ -0.26
LINC01006-208ENST00000624071 ATP5G1P05496 136 aa13.43□□□□□ -0.26
LINC01006-208ENST00000624071 ATP5G3P48201 142 aa13.43□□□□□ -0.26
LINC01006-208ENST00000624071 Q6ZTI0 123 aa13.43□□□□□ -0.26
LINC01006-208ENST00000624071 TREM1Q9NP99 234 aa13.43□□□□□ -0.26
LINC01006-208ENST00000624071 NAGKQ9UJ70 344 aa13.43□□□□□ -0.26
LINC01006-208ENST00000624071 A0A1B0GV50 99 aa13.42□□□□□ -0.26
LINC01006-208ENST00000624071 IFNA7P01567 189 aa13.42□□□□□ -0.26
LINC01006-208ENST00000624071 DAZ2Q13117 558 aaKnown RBP13.42□□□□□ -0.26
LINC01006-208ENST00000624071 FAM210BQ96KR6 192 aa13.42□□□□□ -0.26
LINC01006-208ENST00000624071 PSG8Q9UQ74 426 aa13.42□□□□□ -0.26
LINC01006-208ENST00000624071 SERTM2A0A1B0GWG4 89 aa13.41□□□□□ -0.26
LINC01006-208ENST00000624071 FAM74A7A6NL05 159 aa13.41□□□□□ -0.26
LINC01006-208ENST00000624071 K7EQM0 130 aa13.41□□□□□ -0.26
LINC01006-208ENST00000624071 EIF5AP63241 154 aaKnown RBP13.41□□□□□ -0.26
LINC01006-208ENST00000624071 LGALSLQ3ZCW2 172 aaPredicted RBP13.41□□□□□ -0.26
LINC01006-208ENST00000624071 Q6AWC8 147 aa13.41□□□□□ -0.26
LINC01006-208ENST00000624071 PRNTQ86SH4 94 aa13.41□□□□□ -0.26
LINC01006-208ENST00000624071 LINC00612Q8N6U2 182 aa13.41□□□□□ -0.26
LINC01006-208ENST00000624071 CYB561D1Q8N8Q1 229 aa13.41□□□□□ -0.26
LINC01006-208ENST00000624071 STOML3Q8TAV4 291 aa13.41□□□□□ -0.26
LINC01006-208ENST00000624071 LINC00479Q96M42 142 aa13.41□□□□□ -0.26
LINC01006-208ENST00000624071 TRGV1A0A0A0MS02 117 aa13.4□□□□□ -0.26
LINC01006-208ENST00000624071 TRAV34A0A0B4J273 112 aa13.4□□□□□ -0.26
LINC01006-208ENST00000624071 UMAD1C9J7I0 102 aa13.4□□□□□ -0.26
LINC01006-208ENST00000624071 TPT1P13693 172 aaKnown RBP13.4□□□□□ -0.26
LINC01006-208ENST00000624071 TCL1AP56279 114 aa13.4□□□□□ -0.26
LINC01006-208ENST00000624071 AKAP14Q86UN6 197 aa13.4□□□□□ -0.26
LINC01006-208ENST00000624071 SFT2D1Q8WV19 159 aa13.4□□□□□ -0.26
LINC01006-208ENST00000624071 C8orf49Q96NF6 230 aa13.4□□□□□ -0.26
LINC01006-208ENST00000624071 ATG101Q9BSB4 218 aa13.4□□□□□ -0.26
LINC01006-208ENST00000624071 NDFIP1Q9BT67 221 aa13.4□□□□□ -0.26
LINC01006-208ENST00000624071 IGLV2-11P01706 119 aa13.39□□□□□ -0.27
LINC01006-208ENST00000624071 FLI1Q01543 452 aaPredicted RBP13.39□□□□□ -0.27
LINC01006-208ENST00000624071 TMEM183BQ1AE95 376 aa13.39□□□□□ -0.27
LINC01006-208ENST00000624071 IBA57Q5T440 356 aaKnown RBP13.39□□□□□ -0.27
LINC01006-208ENST00000624071 FAM159AQ6UWV7 190 aa13.39□□□□□ -0.27
LINC01006-208ENST00000624071 TMEM183AQ8IXX5 376 aa13.39□□□□□ -0.27
LINC01006-208ENST00000624071 TRGV2A0A075B6R0 118 aa13.38□□□□□ -0.27
LINC01006-208ENST00000624071 TRAV21A0A0B4J279 112 aa13.38□□□□□ -0.27
LINC01006-208ENST00000624071 C1QBP02746 253 aa13.38□□□□□ -0.27
LINC01006-208ENST00000624071 ZNF415Q09FC8 603 aa13.38□□□□□ -0.27
LINC01006-208ENST00000624071 OR5I1Q13606 314 aa13.38□□□□□ -0.27
LINC01006-208ENST00000624071 CST9LP1Q5W188 147 aa13.38□□□□□ -0.27
LINC01006-208ENST00000624071 MRPL16Q9NX20 251 aaKnown RBP13.38□□□□□ -0.27
LINC01006-208ENST00000624071 MDFICQ9P1T7 246 aa13.38□□□□□ -0.27
LINC01006-208ENST00000624071 PEX7O00628 323 aa13.37□□□□□ -0.27
LINC01006-208ENST00000624071 P0DMU3 169 aa13.37□□□□□ -0.27
LINC01006-208ENST00000624071 FAM231AP0DMU4 169 aa13.37□□□□□ -0.27
LINC01006-208ENST00000624071 FAM231CP0DMU5 169 aa13.37□□□□□ -0.27
LINC01006-208ENST00000624071 ZNF80P51504 273 aaPredicted RBP13.37□□□□□ -0.27
LINC01006-208ENST00000624071 TMEM75Q8N9X5 138 aa13.37□□□□□ -0.27
LINC01006-208ENST00000624071 MBD3L1Q8WWY6 194 aa13.37□□□□□ -0.27
LINC01006-208ENST00000624071 VPS13DQ5THJ4 4388 aa13.36□□□□□ -0.27
LINC01006-208ENST00000624071 GNRH2O43555 120 aa13.36□□□□□ -0.27
LINC01006-208ENST00000624071 SPINK4O60575 86 aa13.36□□□□□ -0.27
LINC01006-208ENST00000624071 NUDT3O95989 172 aa13.36□□□□□ -0.27
LINC01006-208ENST00000624071 HOXA5P20719 270 aa13.36□□□□□ -0.27
LINC01006-208ENST00000624071 TRGV11A0A075B6L2 103 aa13.35□□□□□ -0.27
LINC01006-208ENST00000624071 A0A1B0GVG6 124 aa13.35□□□□□ -0.27
LINC01006-208ENST00000624071 PAGE4O60829 102 aa13.35□□□□□ -0.27
LINC01006-208ENST00000624071 GCGP01275 180 aa13.35□□□□□ -0.27
LINC01006-208ENST00000624071 DPPA3Q6W0C5 159 aa13.35□□□□□ -0.27
LINC01006-208ENST00000624071 UBE2DNLQ8IWF7 75 aa13.35□□□□□ -0.27
LINC01006-208ENST00000624071 NKX6-2Q9C056 277 aaPredicted RBP13.35□□□□□ -0.27
LINC01006-208ENST00000624071 TRAV26-1A0A087WT03 109 aa13.34□□□□□ -0.27
LINC01006-208ENST00000624071 A0A0J9YY99 117 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms