RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 MAP1LC3BQ9GZQ8 125 aa9.92□□□□□ -0.82
PCDHGC3-208ENST00000622836 LENEPQ9Y5L5 61 aa9.92□□□□□ -0.82
PCDHGC3-208ENST00000622836 PLECQ15149 4684 aaKnown RBP9.91□□□□□ -0.82
PCDHGC3-208ENST00000622836 TRAV8-1A0A0A6YYK1 113 aa9.91□□□□□ -0.82
PCDHGC3-208ENST00000622836 ATP5G1P05496 136 aa9.91□□□□□ -0.82
PCDHGC3-208ENST00000622836 ATP5G3P48201 142 aa9.91□□□□□ -0.82
PCDHGC3-208ENST00000622836 UBE2G2P60604 165 aa9.91□□□□□ -0.82
PCDHGC3-208ENST00000622836 TMUB2Q71RG4 321 aa9.91□□□□□ -0.82
PCDHGC3-208ENST00000622836 SGK494Q96LW2 274 aa9.91□□□□□ -0.82
PCDHGC3-208ENST00000622836 TMPRSS5Q9H3S3 457 aa9.91□□□□□ -0.82
PCDHGC3-208ENST00000622836 SACSQ9NZJ4 4579 aa9.91□□□□□ -0.82
PCDHGC3-208ENST00000622836 LYSTQ99698 3801 aa9.91□□□□□ -0.82
PCDHGC3-208ENST00000622836 IGHV1OR15-1A0A075B7D0 117 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 A0A1W2PRE2 83 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 GAGE12BA1L429 117 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 GGTLC3B5MD39 225 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 F5H768 121 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 GAGE7O76087 117 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 IFNA7P01567 189 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 TCRAP04437 139 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 SEC11BP0C7V7 166 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 GAGE12FP0CL80 117 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 GAGE12GP0CL81 117 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 GAGE12IP0CL82 117 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 TPT1P13693 172 aaKnown RBP9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 ANXA2RQ3ZCQ2 193 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 MUC21Q5SSG8 566 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 TCTE3Q8IZS6 198 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 FAM213BQ8TBF2 198 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 FAM210BQ96KR6 192 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 LINC00467Q9BRT7 94 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 TREM1Q9NP99 234 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 NAGKQ9UJ70 344 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 ALMS1Q8TCU4 4167 aa9.9□□□□□ -0.82
PCDHGC3-208ENST00000622836 UMAD1C9J7I0 102 aa9.89□□□□□ -0.83
PCDHGC3-208ENST00000622836 F6UZH7 168 aa9.89□□□□□ -0.83
PCDHGC3-208ENST00000622836 FHITP49789 147 aa9.89□□□□□ -0.83
PCDHGC3-208ENST00000622836 FAM159AQ6UWV7 190 aa9.89□□□□□ -0.83
PCDHGC3-208ENST00000622836 Q6ZQT7 251 aa9.89□□□□□ -0.83
PCDHGC3-208ENST00000622836 AKAP14Q86UN6 197 aa9.89□□□□□ -0.83
PCDHGC3-208ENST00000622836 CYB561D1Q8N8Q1 229 aa9.89□□□□□ -0.83
PCDHGC3-208ENST00000622836 GSN-AS1Q9NRJ2 163 aa9.89□□□□□ -0.83
PCDHGC3-208ENST00000622836 EPDR1Q9UM22 224 aa9.89□□□□□ -0.83
PCDHGC3-208ENST00000622836 DAZ2Q13117 558 aaKnown RBP9.88□□□□□ -0.83
PCDHGC3-208ENST00000622836 Q6AWC8 147 aa9.88□□□□□ -0.83
PCDHGC3-208ENST00000622836 TMEM88Q6PEY1 159 aa9.88□□□□□ -0.83
PCDHGC3-208ENST00000622836 SFT2D1Q8WV19 159 aa9.88□□□□□ -0.83
PCDHGC3-208ENST00000622836 ATG101Q9BSB4 218 aa9.88□□□□□ -0.83
PCDHGC3-208ENST00000622836 NKX6-2Q9C056 277 aaPredicted RBP9.88□□□□□ -0.83
PCDHGC3-208ENST00000622836 TP53TG3Q9ULZ0 132 aa9.88□□□□□ -0.83
PCDHGC3-208ENST00000622836 TRGV2A0A075B6R0 118 aa9.87□□□□□ -0.83
PCDHGC3-208ENST00000622836 TRGV1A0A0A0MS02 117 aa9.87□□□□□ -0.83
PCDHGC3-208ENST00000622836 TRAV21A0A0B4J279 112 aa9.87□□□□□ -0.83
PCDHGC3-208ENST00000622836 A0A1B0GV50 99 aa9.87□□□□□ -0.83
PCDHGC3-208ENST00000622836 P0DMU3 169 aa9.87□□□□□ -0.83
PCDHGC3-208ENST00000622836 FAM231AP0DMU4 169 aa9.87□□□□□ -0.83
PCDHGC3-208ENST00000622836 FAM231CP0DMU5 169 aa9.87□□□□□ -0.83
PCDHGC3-208ENST00000622836 TCL1AP56279 114 aa9.87□□□□□ -0.83
PCDHGC3-208ENST00000622836 FLI1Q01543 452 aaPredicted RBP9.87□□□□□ -0.83
PCDHGC3-208ENST00000622836 ZNF415Q09FC8 603 aa9.87□□□□□ -0.83
PCDHGC3-208ENST00000622836 ZFP69Q49AA0 526 aa9.87□□□□□ -0.83
PCDHGC3-208ENST00000622836 IBA57Q5T440 356 aaKnown RBP9.87□□□□□ -0.83
PCDHGC3-208ENST00000622836 PRNTQ86SH4 94 aa9.87□□□□□ -0.83
PCDHGC3-208ENST00000622836 C11orf72Q8NBR9 251 aa9.87□□□□□ -0.83
PCDHGC3-208ENST00000622836 PSG8Q9UQ74 426 aa9.87□□□□□ -0.83
PCDHGC3-208ENST00000622836 TRGV11A0A075B6L2 103 aa9.86□□□□□ -0.83
PCDHGC3-208ENST00000622836 FBLL1A6NHQ2 334 aaKnown RBP9.86□□□□□ -0.83
PCDHGC3-208ENST00000622836 FAM74A7A6NL05 159 aa9.86□□□□□ -0.83
PCDHGC3-208ENST00000622836 C1QBP02746 253 aa9.86□□□□□ -0.83
PCDHGC3-208ENST00000622836 PPT1P50897 306 aa9.86□□□□□ -0.83
PCDHGC3-208ENST00000622836 OR5I1Q13606 314 aa9.86□□□□□ -0.83
PCDHGC3-208ENST00000622836 TMEM183BQ1AE95 376 aa9.86□□□□□ -0.83
PCDHGC3-208ENST00000622836 LGALSLQ3ZCW2 172 aaPredicted RBP9.86□□□□□ -0.83
PCDHGC3-208ENST00000622836 CST9LP1Q5W188 147 aa9.86□□□□□ -0.83
PCDHGC3-208ENST00000622836 EIF5AL1Q6IS14 154 aaKnown RBP9.86□□□□□ -0.83
PCDHGC3-208ENST00000622836 DPPA3Q6W0C5 159 aa9.86□□□□□ -0.83
PCDHGC3-208ENST00000622836 Q6ZTI0 123 aa9.86□□□□□ -0.83
PCDHGC3-208ENST00000622836 UBE2DNLQ8IWF7 75 aa9.86□□□□□ -0.83
PCDHGC3-208ENST00000622836 TMEM183AQ8IXX5 376 aa9.86□□□□□ -0.83
PCDHGC3-208ENST00000622836 TMEM75Q8N9X5 138 aa9.86□□□□□ -0.83
PCDHGC3-208ENST00000622836 C15orf53Q8NAA6 179 aa9.86□□□□□ -0.83
PCDHGC3-208ENST00000622836 TVP23CQ96ET8 276 aa9.86□□□□□ -0.83
PCDHGC3-208ENST00000622836 KLF12Q9Y4X4 402 aa9.86□□□□□ -0.83
PCDHGC3-208ENST00000622836 PEX7O00628 323 aa9.85□□□□□ -0.83
PCDHGC3-208ENST00000622836 H2AFB1P0C5Y9 115 aa9.85□□□□□ -0.83
PCDHGC3-208ENST00000622836 LINC00612Q8N6U2 182 aa9.85□□□□□ -0.83
PCDHGC3-208ENST00000622836 C8orf49Q96NF6 230 aa9.85□□□□□ -0.83
PCDHGC3-208ENST00000622836 DNAH1Q9P2D7 4330 aa9.85□□□□□ -0.83
PCDHGC3-208ENST00000622836 TRAV34A0A0B4J273 112 aa9.84□□□□□ -0.83
PCDHGC3-208ENST00000622836 NUDT3O95989 172 aa9.84□□□□□ -0.83
PCDHGC3-208ENST00000622836 SMUG1Q53HV7 270 aa9.84□□□□□ -0.83
PCDHGC3-208ENST00000622836 SAPCD1Q5SSQ6 148 aa9.84□□□□□ -0.83
PCDHGC3-208ENST00000622836 HIST1H2BAQ96A08 127 aa9.84□□□□□ -0.83
PCDHGC3-208ENST00000622836 MRPL16Q9NX20 251 aaKnown RBP9.84□□□□□ -0.83
PCDHGC3-208ENST00000622836 SPINK4O60575 86 aa9.83□□□□□ -0.84
PCDHGC3-208ENST00000622836 PAGE4O60829 102 aa9.83□□□□□ -0.84
PCDHGC3-208ENST00000622836 GCGP01275 180 aa9.83□□□□□ -0.84
PCDHGC3-208ENST00000622836 IGLV2-11P01706 119 aa9.83□□□□□ -0.84
PCDHGC3-208ENST00000622836 UBE2G1P62253 170 aa9.83□□□□□ -0.84
PCDHGC3-208ENST00000622836 MBD3L1Q8WWY6 194 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms